FFCP PHASE1:Hg19::chr10:95242030..95242041,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=26509 | |EntrezGene=entrezgene:26509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3656 | |HGNC=HGNC:3656 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F8W8J4,C9JCN0,Q9NZM1 | |UniProt=uniprot:F8W8J4,uniprot:C9JCN0,uniprot:Q9NZM1 | ||
|association_with_transcript=32bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | |association_with_transcript=32bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | ||
|cluster_id=chr10:95242030..95242041,- | |||
|coexpression_cluster_id=C2080 | |coexpression_cluster_id=C2080 | ||
|description=CAGE_peak_6_at_MYOF_5end | |description=CAGE_peak_6_at_MYOF_5end |
Revision as of 16:52, 23 July 2015
Short description: | p6@MYOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYOF_5end |
Coexpression cluster: | C2080_mucinous_Fibroblast_epithelioid_Preadipocyte_Olfactory_prostate_acantholytic |
Association with transcript: | 32bp_to_ENST00000371489, ENST00000371501, ENST00000371502, NM_013451, NM_133337, uc001kin.2, uc001kio.2, uc001kip.3, uc009xuf.2_5end |
EntrezGene: | 26509 |
HGNC: | 3656 |
UniProt: | F8W8J4C9JCN0Q9NZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@MYOF |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 3.95e-18 | 63 |
mesodermal cell | 9.90e-16 | 121 |
embryonic cell | 1.78e-14 | 250 |
fibroblast | 1.93e-14 | 76 |
epithelial cell | 1.96e-14 | 253 |
lining cell | 2.72e-11 | 58 |
barrier cell | 2.72e-11 | 58 |
endothelial cell of vascular tree | 5.60e-11 | 24 |
blood vessel endothelial cell | 1.42e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.42e-09 | 18 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
surface structure | 1.17e-13 | 99 |
vasculature | 1.14e-12 | 78 |
vascular system | 1.14e-12 | 78 |
trunk | 1.14e-10 | 199 |
vessel | 2.59e-10 | 68 |
unilaminar epithelium | 3.99e-10 | 148 |
mesenchyme | 1.15e-09 | 160 |
entire embryonic mesenchyme | 1.15e-09 | 160 |
blood vessel endothelium | 1.42e-09 | 18 |
endothelium | 1.42e-09 | 18 |
Showing 1 to 10 of 27 entries