FFCP PHASE1:Hg19::chr10:97174711..97174718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:97174711..97174718,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_at_chr10:97174711..97174718,- | |description=CAGE_peak_at_chr10:97174711..97174718,- | ||
|id=chr10:97174711..97174718,- | |id=chr10:97174711..97174718,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.69e-25;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.78e-22,15 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.82e-21;1!UBERON:0005062;1.15e-20;4!UBERON:0007284;1.15e-20;4 | |||
|ontology_enrichment_disease=DOID:114!2.11e-11!2 | |ontology_enrichment_disease=DOID:114!2.11e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:178;6.98e-21;1!DOID:326;6.98e-21;1!DOID:3978;6.98e-21;1!DOID:3394;6.98e-21;1!DOID:5844;6.98e-21;1!DOID:114;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,6.31e-21,1;DOID:326,6.31e-21,1;DOID:3978,6.31e-21,1;DOID:3394,6.31e-21,1;DOID:5844,6.31e-21,1;DOID:114,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-34!115;UBERON:0002771!1.05e-14!3;UBERON:0000200!1.13e-12!6;UBERON:0007100!4.78e-11!27;UBERON:0002148!1.99e-10!2;UBERON:0009662!1.99e-10!2;UBERON:0002346!7.01e-10!90;UBERON:0003075!4.31e-09!86;UBERON:0007284!4.31e-09!86;UBERON:0003103!3.99e-08!69;UBERON:0003978!6.24e-08!3;UBERON:0009751!6.24e-08!3;UBERON:0000946!6.24e-08!3;UBERON:0002523!6.24e-08!3;UBERON:0005983!6.24e-08!3;UBERON:0002165!6.24e-08!3;UBERON:0002062!6.24e-08!3;UBERON:0007280!6.24e-08!3;UBERON:0004151!6.90e-08!3;UBERON:0001049!1.11e-07!57;UBERON:0005068!1.11e-07!57;UBERON:0006241!1.11e-07!57;UBERON:0007135!1.11e-07!57;UBERON:0002020!2.45e-07!34;UBERON:0003528!2.45e-07!34;UBERON:0000988!3.14e-07!3;UBERON:0006331!3.14e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.56e-27;3!UBERON:0000946;3.56e-27;3!UBERON:0002079;3.82e-21;1!UBERON:0002146;3.82e-21;1!UBERON:0005623;3.82e-21;1!UBERON:0002135;6.98e-21;1!UBERON:0007100;5.34e-13;25!UBERON:0002081;2.88e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0010313;7.36e-09;10!UBERON:0000948;9.81e-09;22!UBERON:0004151;6.13e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.65e-27,3;UBERON:0009751,4.65e-27,3;UBERON:0000946,4.65e-27,3;UBERON:0002523,4.65e-27,3;UBERON:0005983,4.65e-27,3;UBERON:0002165,4.65e-27,3;UBERON:0002062,4.65e-27,3;UBERON:0007280,4.65e-27,3;UBERON:0002079,3.45e-21,1;UBERON:0002146,4.22e-21,1;UBERON:0005623,4.22e-21,1;UBERON:0002135,9.43e-21,1;UBERON:0004797,3.34e-12,7;UBERON:0007100,4.72e-12,27;UBERON:0002081,2.73e-11,2;UBERON:0010227,2.73e-11,2;UBERON:0002133,4.52e-11,2;UBERON:0010313,7.96e-09,10;UBERON:0002342,7.96e-09,10;UBERON:0005062,7.96e-09,10;UBERON:0000948,4.86e-08,24;UBERON:0005498,4.86e-08,24;UBERON:0004140,4.86e-08,24;UBERON:0009881,4.86e-08,24;UBERON:0004141,4.86e-08,24;UBERON:0003084,4.86e-08,24;UBERON:0007005,4.86e-08,24;UBERON:0004139,4.86e-08,24;UBERON:0004291,4.86e-08,24;UBERON:0004151,5.93e-08,3 | |||
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|short_description=p@chr10:97174711..97174718,- | |short_description=p@chr10:97174711..97174718,- | ||
}} | }} |
Latest revision as of 17:01, 23 July 2015
Short description: | p@chr10:97174711..97174718, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:97174711..97174718, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.78e-22 | 15 |
Ontology term | p-value | n |
---|---|---|
valve | 4.65e-27 | 3 |
cardiac mesenchyme | 4.65e-27 | 3 |
cardial valve | 4.65e-27 | 3 |
tunica intima | 4.65e-27 | 3 |
heart layer | 4.65e-27 | 3 |
endocardium | 4.65e-27 | 3 |
endocardial cushion | 4.65e-27 | 3 |
presumptive endocardium | 4.65e-27 | 3 |
left cardiac atrium | 3.45e-21 | 1 |
pulmonary valve | 4.22e-21 | 1 |
semi-lunar valve | 4.22e-21 | 1 |
mitral valve | 9.43e-21 | 1 |
blood vessel layer | 3.34e-12 | 7 |
primary circulatory organ | 4.72e-12 | 27 |
cardiac atrium | 2.73e-11 | 2 |
future cardiac atrium | 2.73e-11 | 2 |
atrioventricular valve | 4.52e-11 | 2 |
neural crest-derived structure | 7.96e-09 | 10 |
neural crest | 7.96e-09 | 10 |
neural fold | 7.96e-09 | 10 |
heart | 4.86e-08 | 24 |
primitive heart tube | 4.86e-08 | 24 |
primary heart field | 4.86e-08 | 24 |
anterior lateral plate mesoderm | 4.86e-08 | 24 |
heart tube | 4.86e-08 | 24 |
heart primordium | 4.86e-08 | 24 |
cardiac mesoderm | 4.86e-08 | 24 |
cardiogenic plate | 4.86e-08 | 24 |
heart rudiment | 4.86e-08 | 24 |
cardiac chamber | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 6.31e-21 | 1 |
ischemia | 6.31e-21 | 1 |
extrinsic cardiomyopathy | 6.31e-21 | 1 |
myocardial ischemia | 6.31e-21 | 1 |
myocardial infarction | 6.31e-21 | 1 |
heart disease | 3.70e-11 | 2 |