FFCP PHASE1:Hg19::chr11:102140952..102140956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:102140952..102140956,+ | |||
|coexpression_cluster_id=C1601 | |||
|description=CAGE_peak_at_chr11:102140952..102140956,+ | |||
|id=chr11:102140952..102140956,+ | |||
|ontology_enrichment_celltype=CL:0002166!3.75e-19!3;CL:0002621!6.42e-19!3;CL:0002076!2.71e-14!43;CL:0002327!2.77e-13!4;CL:0002251!8.22e-13!21;CL:0002159!1.62e-11!13;CL:0000223!7.40e-10!59;CL:0000240!1.58e-09!6;CL:0000311!1.58e-09!6;CL:0000079!1.58e-09!6;CL:0000237!1.58e-09!6;CL:0000036!1.58e-09!6;CL:0000357!1.58e-09!6;CL:0000114!1.58e-09!6;CL:0000066!4.69e-09!254;CL:0000068!1.06e-08!3;CL:0000069!1.06e-08!3;CL:0000307!1.06e-08!3;CL:0000377!1.06e-08!3;CL:0002077!5.80e-08!33;CL:0002336!2.37e-07!1;CL:0002261!2.37e-07!1;CL:0002170!2.37e-07!1;CL:0002368!2.65e-07!13;CL:0000319!6.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.55e-98;3!CL:0002159;5.19e-38;14!CL:0002077;7.10e-14;34!CL:0002621;2.07e-12;3!CL:0000307;2.74e-12;3!CL:0000312;6.78e-08;5!CL:0000240;8.72e-07;6!CL:0000311;8.72e-07;6!CL:0000079;8.72e-07;6!CL:0000237;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.95e-99,3;CL:0002159,4.50e-38,14;CL:0002077,4.10e-16,34;CL:0002621,2.07e-12,3;CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3;CL:0000312,7.01e-08,5;CL:0000221,1.05e-07,72;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;2.74e-12;3!CL:0000357;8.72e-07;6!CL:0000114;8.72e-07;6 | |||
|ontology_enrichment_disease=DOID:0060084!1.10e-08!3;DOID:127!1.10e-08!3;DOID:3151!4.57e-07!1;DOID:3149!4.57e-07!1;DOID:3030!6.49e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.42e-19!3;UBERON:0001708!1.70e-14!4;UBERON:0001704!1.70e-14!4;UBERON:0001911!2.77e-13!4;UBERON:0005333!2.77e-13!4;UBERON:0008425!2.77e-13!4;UBERON:0005311!2.77e-13!4;UBERON:0002090!8.09e-10!6;UBERON:0001828!2.22e-07!8;UBERON:0000165!5.37e-07!28;UBERON:0000930!5.37e-07!28;UBERON:0000076!7.05e-07!8;UBERON:0000166!9.47e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.31e-74;4!UBERON:0008895;3.31e-74;4!UBERON:0011159;1.35e-59;5!UBERON:0011137;1.17e-27;11!UBERON:0010323;1.17e-27;11!UBERON:0000075;2.65e-19;16!UBERON:0001949;2.07e-12;3!UBERON:0004765;3.38e-12;26!UBERON:0001434;4.46e-09;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.01e-74,4;UBERON:0008895,2.01e-74,4;UBERON:0011159,9.01e-60,5;UBERON:0010188,5.37e-50,6;UBERON:0002539,5.37e-50,6;UBERON:0008816,5.37e-50,6;UBERON:0010323,9.75e-28,11;UBERON:0011137,5.39e-22,14;UBERON:0000075,2.33e-19,16;UBERON:0008814,2.64e-17,18;UBERON:0001949,2.07e-12,3;UBERON:0000033,4.77e-10,56;UBERON:0000153,3.98e-09,62;UBERON:0007811,3.98e-09,62;UBERON:0003102,8.34e-09,99 | |||
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|short_description=p@chr11:102140952..102140956,+ | |||
}} | }} |
Latest revision as of 17:25, 23 July 2015
Short description: | p@chr11:102140952..102140956, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102140952..102140956, + |
Coexpression cluster: | C1601_Mallassezderived_Gingival_Keratinocyte_Prostate_Sebocyte_salivary_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.95e-99 | 3 |
general ecto-epithelial cell | 4.50e-38 | 14 |
ecto-epithelial cell | 4.10e-16 | 34 |
gingival epithelial cell | 2.07e-12 | 3 |
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
keratinocyte | 7.01e-08 | 5 |
ectodermal cell | 1.05e-07 | 72 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.01e-74 | 4 |
splanchnocranium | 2.01e-74 | 4 |
primary subdivision of cranial skeletal system | 9.01e-60 | 5 |
protuberance | 5.37e-50 | 6 |
pharyngeal arch | 5.37e-50 | 6 |
embryonic head | 5.37e-50 | 6 |
cranial skeletal system | 9.75e-28 | 11 |
axial skeletal system | 5.39e-22 | 14 |
subdivision of skeletal system | 2.33e-19 | 16 |
pharyngeal arch system | 2.64e-17 | 18 |
gingival epithelium | 2.07e-12 | 3 |
head | 4.77e-10 | 56 |
anterior region of body | 3.98e-09 | 62 |
craniocervical region | 3.98e-09 | 62 |
surface structure | 8.34e-09 | 99 |