FFCP PHASE1:Hg19::chr11:12341235..12341246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:12341235..12341246,+ | |||
|coexpression_cluster_id=C732 | |||
|description=CAGE_peak_at_chr11:12341235..12341246,+ | |||
|id=chr11:12341235..12341246,+ | |||
|ontology_enrichment_celltype=CL:0002150!5.43e-15!3;CL:0000861!5.43e-15!3;CL:0000242!5.34e-12!2;CL:0002553!9.30e-07!1;CL:0000167!9.81e-07!1;CL:0000164!9.81e-07!1;CL:0000502!9.81e-07!1;CL:0000172!9.81e-07!1;CL:0000173!9.81e-07!1;CL:0002351!9.81e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.89e-41;2!CL:0000242;4.89e-41;2!CL:0002553;3.45e-21;1!CL:0000167;6.31e-21;1!CL:0000164;6.31e-21;1!CL:0000502;6.31e-21;1!CL:0000172;6.31e-21;1!CL:0000173;6.31e-21;1!CL:0000312;4.28e-17;5!CL:0000240;2.04e-14;6!CL:0000311;2.04e-14;6!CL:0000079;2.04e-14;6!CL:0000237;2.04e-14;6!CL:0002535;3.70e-11;2!CL:0000362;6.20e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.89e-41,2;CL:0002553,3.45e-21,1;CL:0000167,4.22e-21,1;CL:0000164,4.22e-21,1;CL:0000502,4.22e-21,1;CL:0000172,4.22e-21,1;CL:0000173,4.22e-21,1;CL:0002351,4.22e-21,1;CL:0000312,4.28e-17,5;CL:0000240,2.04e-14,6;CL:0000311,2.04e-14,6;CL:0000079,2.04e-14,6;CL:0000237,2.04e-14,6;CL:0000036,2.04e-14,6;CL:0000357,2.04e-14,6;CL:0000114,2.04e-14,6;CL:0002535,4.09e-11,2;CL:0000362,6.20e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002351;6.31e-21;1!CL:0000357;2.04e-14;6!CL:0000114;2.04e-14;6 | |||
|ontology_enrichment_disease=DOID:171!8.29e-18!10;DOID:162!6.53e-11!235;DOID:14566!1.47e-10!239;DOID:4362!5.13e-10!5;DOID:0050687!7.64e-10!143;DOID:169!2.62e-08!6;DOID:3095!9.00e-08!22;DOID:2994!9.00e-08!22;DOID:4430!9.81e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;6.31e-21;1!DOID:2355;6.31e-21;1!DOID:169;4.53e-14;6!DOID:74;3.70e-11;2!DOID:171;7.96e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.22e-21,1;DOID:2355,6.31e-21,1;DOID:169,4.53e-14,6;DOID:74,3.70e-11,2;DOID:0050687,7.86e-11,143;DOID:171,7.96e-09,10;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0000002!2.04e-08!6;UBERON:0001560!2.04e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.09e-11,2;UBERON:0004801,4.09e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10269035917318,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74667924645505,4.49255188693558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0.109209638192014,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0,2.40171224485641,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,3.780064728066,0,0,0,1.50962843566674,0,0,0.940634592723046,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10269035917318,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74667924645505,4.49255188693558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0.109209638192014,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0,2.40171224485641,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,3.780064728066,0,0,0,1.50962843566674,0,0,0.940634592723046,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:12341235..12341246,+ | |||
}} | }} |
Latest revision as of 19:26, 23 July 2015
Short description: | p@chr11:12341235..12341246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12341235..12341246, + |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.89e-41 | 2 |
lung fibroblast | 3.45e-21 | 1 |
peptide hormone secreting cell | 4.22e-21 | 1 |
enteroendocrine cell | 4.22e-21 | 1 |
type D enteroendocrine cell | 4.22e-21 | 1 |
somatostatin secreting cell | 4.22e-21 | 1 |
pancreatic D cell | 4.22e-21 | 1 |
progenitor cell of endocrine pancreas | 4.22e-21 | 1 |
keratinocyte | 4.28e-17 | 5 |
stratified squamous epithelial cell | 2.04e-14 | 6 |
keratin accumulating cell | 2.04e-14 | 6 |
stratified epithelial cell | 2.04e-14 | 6 |
keratinizing barrier epithelial cell | 2.04e-14 | 6 |
epithelial fate stem cell | 2.04e-14 | 6 |
stratified epithelial stem cell | 2.04e-14 | 6 |
surface ectodermal cell | 2.04e-14 | 6 |
epithelial cell of cervix | 4.09e-11 | 2 |
epidermal cell | 6.20e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.09e-11 | 2 |
cervix epithelium | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.22e-21 | 1 |
anemia | 6.31e-21 | 1 |
neuroendocrine tumor | 4.53e-14 | 6 |
hematopoietic system disease | 3.70e-11 | 2 |
cell type cancer | 7.86e-11 | 143 |
neuroectodermal tumor | 7.96e-09 | 10 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |