FFCP PHASE1:Hg19::chr11:128392481..128392492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:128392481..128392492,+ | |||
|description=CAGE_peak_at_chr11:128392481..128392492,+ | |description=CAGE_peak_at_chr11:128392481..128392492,+ | ||
|id=chr11:128392481..128392492,+ | |id=chr11:128392481..128392492,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.27e-31!18;CL:0000789!4.27e-31!18;CL:0002420!4.27e-31!18;CL:0002419!4.27e-31!18;CL:0000790!4.27e-31!18;CL:0000084!8.33e-27!25;CL:0000827!8.33e-27!25;CL:0000838!4.25e-24!52;CL:0000542!1.70e-23!53;CL:0000051!1.70e-23!53;CL:0000625!2.54e-20!11;CL:0000738!2.14e-15!140;CL:0002087!4.44e-14!119;CL:0002031!3.32e-11!124;CL:0000624!8.40e-11!6;CL:0000037!1.34e-10!172;CL:0000566!1.34e-10!172;CL:0000988!1.80e-09!182;CL:0000623!1.10e-08!3;CL:0000825!1.10e-08!3;CL:0000898!1.37e-08!3;CL:0002032!2.03e-08!165;CL:0000837!2.03e-08!165;CL:0000767!8.27e-08!3;CL:0000842!3.11e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.27e-31!18;CL:0000789!4.27e-31!18;CL:0002420!4.27e-31!18;CL:0002419!4.27e-31!18;CL:0000790!4.27e-31!18;CL:0000084!8.33e-27!25;CL:0000827!8.33e-27!25;CL:0000838!4.25e-24!52;CL:0000542!1.70e-23!53;CL:0000051!1.70e-23!53;CL:0000625!2.54e-20!11;CL:0000738!2.14e-15!140;CL:0002087!4.44e-14!119;CL:0002031!3.32e-11!124;CL:0000624!8.40e-11!6;CL:0000037!1.34e-10!172;CL:0000566!1.34e-10!172;CL:0000988!1.80e-09!182;CL:0000623!1.10e-08!3;CL:0000825!1.10e-08!3;CL:0000898!1.37e-08!3;CL:0002032!2.03e-08!165;CL:0000837!2.03e-08!165;CL:0000767!8.27e-08!3;CL:0000842!3.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.81e-54;3!CL:0000815;4.31e-37;2!CL:0000792;4.31e-37;2!CL:0002677;4.31e-37;2!CL:0000624;1.12e-27;6!CL:0000791;3.55e-25;18!CL:0000789;3.55e-25;18!CL:0002419;3.55e-25;18!CL:0000898;4.05e-25;3!CL:0000084;3.48e-18;25!CL:0000542;5.32e-11;53!CL:0002262;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0000625;1.49e-07;11!CL:0000784;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.25e-54,3;CL:0000825,1.25e-54,3;CL:0000815,3.94e-37,2;CL:0000792,3.94e-37,2;CL:0002677,3.94e-37,2;CL:0000624,7.78e-28,6;CL:0000791,3.47e-25,18;CL:0000789,3.47e-25,18;CL:0002420,3.47e-25,18;CL:0002419,3.47e-25,18;CL:0000790,3.47e-25,18;CL:0000898,3.82e-25,3;CL:0000838,8.32e-22,52;CL:0000542,2.18e-21,53;CL:0000051,2.18e-21,53;CL:0000084,3.42e-18,25;CL:0000827,3.42e-18,25;CL:0002262,2.72e-10,2;CL:1000398,2.72e-10,2;CL:0000738,4.14e-10,136;CL:0002087,1.58e-09,115;CL:0002031,4.13e-09,120;CL:0000037,4.56e-08,168;CL:0000988,1.27e-07,177;CL:0000625,1.67e-07,11;CL:0000784,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.55e-25;18!CL:0000051;5.32e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.61e-09!4;UBERON:0005058!4.61e-09!4;UBERON:0009113!4.61e-09!4;UBERON:0003295!4.61e-09!4;UBERON:0005562!4.61e-09!4;UBERON:0004177!1.87e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.72e-10,2;UBERON:0003497,2.72e-10,2;UBERON:0003909,2.72e-10,2;UBERON:0003835,2.72e-10,2;UBERON:0001280,2.79e-07,3;UBERON:0004647,2.79e-07,3;UBERON:0005171,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0.246301768349837,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.590129310341499,1.57204305099666,0,0,2.28145586643513,1.4203434172042,0,0.222820913770347,1.47302953737419,0,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0.766440987203842,0.68725489096526,0.506039384039006,0.95569624297229,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0.236777252044017,2.46338399076314,0.80642697289893,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.37921532141349,1.50939302401662,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr11:128392481..128392492,+ | |short_description=p@chr11:128392481..128392492,+ | ||
}} | }} |
Latest revision as of 19:52, 23 July 2015
Short description: | p@chr11:128392481..128392492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128392481..128392492, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.25e-54 | 3 |
pro-NK cell | 1.25e-54 | 3 |
regulatory T cell | 3.94e-37 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.94e-37 | 2 |
naive regulatory T cell | 3.94e-37 | 2 |
CD4-positive, alpha-beta T cell | 7.78e-28 | 6 |
mature alpha-beta T cell | 3.47e-25 | 18 |
alpha-beta T cell | 3.47e-25 | 18 |
immature T cell | 3.47e-25 | 18 |
mature T cell | 3.47e-25 | 18 |
immature alpha-beta T cell | 3.47e-25 | 18 |
naive T cell | 3.82e-25 | 3 |
lymphoid lineage restricted progenitor cell | 8.32e-22 | 52 |
lymphocyte | 2.18e-21 | 53 |
common lymphoid progenitor | 2.18e-21 | 53 |
T cell | 3.42e-18 | 25 |
pro-T cell | 3.42e-18 | 25 |
endothelial cell of sinusoid | 2.72e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.72e-10 | 2 |
leukocyte | 4.14e-10 | 136 |
nongranular leukocyte | 1.58e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.13e-09 | 120 |
hematopoietic stem cell | 4.56e-08 | 168 |
hematopoietic cell | 1.27e-07 | 177 |
CD8-positive, alpha-beta T cell | 1.67e-07 | 11 |
plasmacytoid dendritic cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.72e-10 | 2 |
abdomen blood vessel | 2.72e-10 | 2 |
sinusoid | 2.72e-10 | 2 |
abdominal segment blood vessel | 2.72e-10 | 2 |
liver parenchyma | 2.79e-07 | 3 |
liver lobule | 2.79e-07 | 3 |
hepatic duct | 2.79e-07 | 3 |