FFCP PHASE1:Hg19::chr11:19864352..19864364,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:19864352..19864364,+ | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_at_chr11:19864352..19864364,+ | |||
|id=chr11:19864352..19864364,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.67e-41!9;CL:0000594!2.04e-11!3;CL:0000183!2.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000188;6.20e-29;9!CL:0002575;1.43e-15;2!CL:0000594;8.99e-11;3!CL:0000669;1.89e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.82e-29,9;CL:0002575,1.54e-15,2;CL:0000594,8.99e-11,3;CL:0000669,1.96e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.37e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!8.55e-17!2;UBERON:0001134!5.21e-09!61;UBERON:0002036!5.21e-09!61;UBERON:0003082!5.21e-09!61;UBERON:0002385!1.11e-08!63;UBERON:0001015!1.11e-08!63;UBERON:0000383!1.11e-08!63;UBERON:0000914!9.51e-08!83;UBERON:0002329!9.51e-08!83;UBERON:0003077!9.51e-08!83;UBERON:0003059!9.51e-08!83;UBERON:0007282!9.51e-08!83;UBERON:0009618!9.51e-08!83;UBERON:0007285!9.51e-08!83;UBERON:0004290!1.12e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.36e-29;16!UBERON:0002036;9.36e-29;16!UBERON:0000341;2.37e-15;2!UBERON:0002385;2.37e-14;31!UBERON:0001015;2.37e-14;31!UBERON:0000383;2.37e-14;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.37e-15,2;UBERON:0001134,8.30e-08,62;UBERON:0002036,8.30e-08,62;UBERON:0003082,8.30e-08,62;UBERON:0002385,1.41e-07,64;UBERON:0001015,1.41e-07,64;UBERON:0000383,1.41e-07,64;UBERON:0002329,7.23e-07,71;UBERON:0003059,7.23e-07,71;UBERON:0007282,7.23e-07,71;UBERON:0004290,7.23e-07,71;UBERON:0009618,7.23e-07,71;UBERON:0003077,8.90e-07,72;UBERON:0007285,8.90e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0882908142977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0.307007349452259,1.24052915236078,0,0.290033387828457,2.81247870473133,5.87611435268467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,3.4794432940146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,1.42838658878244,0,0,0,0,0.202117188958219,0,0.684466602170562,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:19864352..19864364,+ | |||
}} |
Latest revision as of 20:51, 23 July 2015
Short description: | p@chr11:19864352..19864364, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19864352..19864364, + |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.82e-29 | 9 |
central nervous system pericyte | 1.54e-15 | 2 |
skeletal muscle satellite cell | 8.99e-11 | 3 |
pericyte cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
throat | 2.37e-15 | 2 |
skeletal muscle tissue | 8.30e-08 | 62 |
striated muscle tissue | 8.30e-08 | 62 |
myotome | 8.30e-08 | 62 |
muscle tissue | 1.41e-07 | 64 |
musculature | 1.41e-07 | 64 |
musculature of body | 1.41e-07 | 64 |
somite | 7.23e-07 | 71 |
presomitic mesoderm | 7.23e-07 | 71 |
presumptive segmental plate | 7.23e-07 | 71 |
dermomyotome | 7.23e-07 | 71 |
trunk paraxial mesoderm | 7.23e-07 | 71 |
paraxial mesoderm | 8.90e-07 | 72 |
presumptive paraxial mesoderm | 8.90e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.05e-15 | 2 |