FFCP PHASE1:Hg19::chr11:61630451..61630464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:61630451..61630464,+ | |||
|description=CAGE_peak_at_chr11:61630451..61630464,+ | |description=CAGE_peak_at_chr11:61630451..61630464,+ | ||
|id=chr11:61630451..61630464,+ | |id=chr11:61630451..61630464,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.29e-18!180;CL:0000144!2.07e-14!625;CL:0002371!1.29e-13!591;CL:0002321!9.91e-13!248;CL:0000220!1.55e-12!246;CL:0000057!1.57e-10!75;CL:0000221!1.08e-09!71;CL:0000548!1.18e-09!679;CL:0000004!1.18e-09!679;CL:0000255!1.18e-09!679;CL:0000012!5.30e-09!682;CL:0000133!2.04e-08!59;CL:0000325!5.28e-08!39;CL:0000393!4.37e-07!60;CL:0000211!4.37e-07!60;CL:1000449!6.02e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.29e-18!180;CL:0000144!2.07e-14!625;CL:0002371!1.29e-13!591;CL:0002321!9.91e-13!248;CL:0000220!1.55e-12!246;CL:0000057!1.57e-10!75;CL:0000221!1.08e-09!71;CL:0000548!1.18e-09!679;CL:0000004!1.18e-09!679;CL:0000255!1.18e-09!679;CL:0000012!5.30e-09!682;CL:0000133!2.04e-08!59;CL:0000325!5.28e-08!39;CL:0000393!4.37e-07!60;CL:0000211!4.37e-07!60;CL:1000449!6.02e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.13e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.27e-10,61;CL:0000211,1.27e-10,61;CL:0002321,1.31e-10,250;CL:0000221,5.00e-10,72;CL:0000057,5.88e-09,76;CL:0000133,2.43e-08,59;CL:0000187,9.96e-08,55;CL:1000449,1.27e-07,15;CL:0000680,2.28e-07,58;CL:0000056,2.28e-07,58;CL:0000355,2.28e-07,58;CL:0002077,4.90e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.20e-14!143;UBERON:0000475!1.91e-14!365;UBERON:0000119!1.03e-12!312;UBERON:0000483!3.62e-12!309;UBERON:0002100!3.00e-10!216;UBERON:0000481!3.02e-10!347;UBERON:0000914!5.47e-09!83;UBERON:0002329!5.47e-09!83;UBERON:0003077!5.47e-09!83;UBERON:0003059!5.47e-09!83;UBERON:0007282!5.47e-09!83;UBERON:0009618!5.47e-09!83;UBERON:0007285!5.47e-09!83;UBERON:0000477!2.78e-08!286;UBERON:0000922!1.06e-07!612;UBERON:0000468!1.13e-07!659;UBERON:0002050!2.69e-07!605;UBERON:0005423!2.69e-07!605;UBERON:0000923!2.78e-07!604;UBERON:0005291!2.78e-07!604;UBERON:0006598!2.78e-07!604;UBERON:0002532!2.78e-07!604;UBERON:0000080!4.06e-07!18;UBERON:0002120!4.06e-07!18;UBERON:0004875!4.06e-07!18;UBERON:0005721!4.06e-07!18;UBERON:0005754!4.06e-07!18;UBERON:0007297!4.06e-07!18;UBERON:0002417!5.42e-07!61;UBERON:0000916!5.42e-07!61;UBERON:0004211!6.02e-07!16;UBERON:0001285!6.02e-07!16;UBERON:0007684!6.02e-07!16;UBERON:0003220!6.02e-07!16;UBERON:0004208!6.02e-07!16;UBERON:0000064!6.12e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.17e-07;11!UBERON:0006555;3.13e-07;15!UBERON:0004819;3.13e-07;15!UBERON:0001285;3.13e-07;15!UBERON:0007684;3.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.78e-12,160;UBERON:0009142,7.78e-12,160;UBERON:0007503,2.67e-11,78;UBERON:0005256,3.63e-11,122;UBERON:0000119,5.25e-11,309;UBERON:0000483,1.18e-10,306;UBERON:0007524,2.23e-09,73;UBERON:0003077,3.23e-09,72;UBERON:0007285,3.23e-09,72;UBERON:0002329,4.98e-09,71;UBERON:0003059,4.98e-09,71;UBERON:0007282,4.98e-09,71;UBERON:0004290,4.98e-09,71;UBERON:0009618,4.98e-09,71;UBERON:0002100,1.13e-08,199;UBERON:0000490,3.31e-08,148;UBERON:0006876,3.94e-08,11;UBERON:0004211,1.27e-07,15;UBERON:0009773,1.27e-07,15;UBERON:0001231,1.27e-07,15;UBERON:0001285,1.27e-07,15;UBERON:0007684,1.27e-07,15;UBERON:0004208,1.27e-07,15;UBERON:0000486,1.68e-07,83;UBERON:0005423,2.88e-07,581;UBERON:0000922,3.22e-07,592;UBERON:0006555,6.95e-07,16;UBERON:0004819,6.95e-07,16;UBERON:0000353,7.95e-07,15 | |||
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|phase1_expression=2.90685406832891,16.6998408634967,2.53717927372748,6.00439790118782,8.04529969969118,14.8297549097063,2.53299878168311,5.05375898741465,2.87304191019822,0.737201809504527,4.88460817580699,0.436882744260345,0.791300934685361,3.58922423584135,3.31397375727916,1.34465029290355,1.20538905604795,0,1.46379839637152,0.861847406537515,3.67201244239655,1.88072832886853,1.14494394852423,5.88560027813402,3.64073654824928,0.916960868975415,0.656804715599566,0.472264687882075,0,0.383829398097213,0,3.67768489791571,1.50602959389125,1.84877005083394,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37770945674,2.17366355134002,0,0,0.434539556882471,0.795285947051099,0,2.74150969775797,8.42571710357743,3.24988707064566,0.196468613246569,0.364295288292542,1.48313777113772,0.324547393654683,0.348259474598534,1.19662164466979,0,0.571994910780128,0,0.79504962946682,0,1.38856200643038,0,0.419499436209906,3.57653454522088,0.417989933073621,0.516833518338658,0.35576626268671,0,1.61131726843659,0,1.70843440283719,0.367663080345869,0.81014194788176,0.803697554556718,0.673588117878509,1.12611480483322,0,0,0.916008719652036,0,0,0.872188104285069,0,1.77282716330412,0.397227542439656,4.30254931123221,1.06400514659507,2.80338800071154,1.06748995729705,1.2333377420858,0.311211035399766,2.15537075311501,3.75962377160955,2.8757911252537,3.45705554687999,0.937285727335186,2.49728061464256,0,4.93180645820944,6.22402842811954,3.56120477609889,5.05622904128095,3.26646674007829,13.0204376350474,3.71972812232756,5.94001428641027,6.18167323196392,0.910161361938026,10.0606539854273,3.53505839303539,6.50616303334214,0.554128230968366,2.19488810440419,1.22595118319608,1.50238058906597,3.06266894532057,1.25572744982203,1.06778694409284,0,0.600182192168805,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.276149695926898,0.969876340912871,1.06502877754984,0.503760491138201,0.339121184620975,1.93260853163297,0.545492241181669,0.573609190778008,1.09776335516636,0.662648841607426,1.2781333715647,1.0366105501537,1.26160425437814,0.36497735907583,0,2.57296375277154,1.38134921352481,3.71494342425583,16.6032280784005,0.473227200159376,1.01150814046861,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,0.392442930250692,0,4.42893272774789,4.20725321410337,2.4694440679884,7.3504355692771,6.33775174109154,2.94848165003288,1.77236972004421,0,0.737930631258681,1.88724591328378,1.86575485194663,0,1.00528972411631,0.740707561268237,0.325808305310325,7.27954349695705,5.77325368101093,1.73895607462615,1.17408694235822,0.721832238805369,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.594524649154913,3.74935335947108,1.17587489739202,1.27597587518148,0.268675568108545,0.290633938513962,0,0.985326475791887,1.32072651019839,0.414656231081544,0.144119953416961,0,0.507983154337352,0.763976851116555,1.17217447210047,8.55362230113526,2.98199728839638,0.901029173531752,4.0015700568281,1.68196626518041,0.87192013766656,2.0534720029866,0.775630294546667,10.7296933755565,1.690605505112,3.45719551560332,5.2003718455683,2.05765899409714,0,1.0656887160644,4.71827379071887,6.51145926469732,6.58592269424615,0.977208552881205,6.04166312862328,0.791951872933429,1.50719688529793,0,0.799783929456456,0,2.00902836572851,2.10833939483032,0.718874566474748,3.44585807502342,0,0.868687840005475,1.43833425785268,0.358121926479791,0,0,0,0,1.52456774533478,0,3.09315525111078,1.34013012267479,5.74144876487847,0,0,0,0.736148950314839,2.50085260529839,1.62759014219841,2.07970861530807,10.7057393278297,2.83864347061082,1.63997980989798,0,6.82222512167955,7.24311499047534,0,1.10621501125022,3.90976265106373,8.2236486134351,4.80400793335198,0,0,0,0.303127571446259,3.32870879020994,2.11673205330776,1.48864684691266,0.767309866440312,5.61320188866147,2.94720043288112,3.07024349440022,2.73451665944133,8.90508398669946,0.462629081407967,1.42049380250502,0.164254312027618,0.519254429183621,0.813472649219715,0.483437798366489,2.6065841139427,0.276242966807689,2.06666006696292,2.91345868810747,5.24497659837697,1.35359883872224,2.77255213575893,2.35304930753057,2.92278449306521,1.68882606228601,10.2360045663807,2.89159298970077,0.863663664408557,1.54227252690289,2.16757150035082,2.50844886927427,1.52925763827023,1.66215201785745,2.0148727924996,0.219259876645935,0.522870902049801,4.87255237721139,2.29610251989794,1.30151357865721,0.824328093181778,1.37354197227515,0.495056999523528,0.574265537996172,1.30012049207304,0,0,2.31072925671967,2.6095624703442,2.34322173223702,3.33002759091648,7.1058180017972,1.70453254832202,0.3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| ||
|short_description=p@chr11:61630451..61630464,+ | |short_description=p@chr11:61630451..61630464,+ | ||
}} | }} |
Latest revision as of 23:31, 23 July 2015
Short description: | p@chr11:61630451..61630464, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:61630451..61630464, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.27e-10 | 61 |
electrically active cell | 1.27e-10 | 61 |
embryonic cell | 1.31e-10 | 250 |
ectodermal cell | 5.00e-10 | 72 |
fibroblast | 5.88e-09 | 76 |
neurectodermal cell | 2.43e-08 | 59 |
muscle cell | 9.96e-08 | 55 |
epithelial cell of nephron | 1.27e-07 | 15 |
muscle precursor cell | 2.28e-07 | 58 |
myoblast | 2.28e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.28e-07 | 58 |
ecto-epithelial cell | 4.90e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 7.78e-12 | 160 |
entire embryonic mesenchyme | 7.78e-12 | 160 |
epithelial vesicle | 2.67e-11 | 78 |
trunk mesenchyme | 3.63e-11 | 122 |
cell layer | 5.25e-11 | 309 |
epithelium | 1.18e-10 | 306 |
dense mesenchyme tissue | 2.23e-09 | 73 |
paraxial mesoderm | 3.23e-09 | 72 |
presumptive paraxial mesoderm | 3.23e-09 | 72 |
somite | 4.98e-09 | 71 |
presomitic mesoderm | 4.98e-09 | 71 |
presumptive segmental plate | 4.98e-09 | 71 |
dermomyotome | 4.98e-09 | 71 |
trunk paraxial mesoderm | 4.98e-09 | 71 |
trunk | 1.13e-08 | 199 |
unilaminar epithelium | 3.31e-08 | 148 |
vasculature of organ | 3.94e-08 | 11 |
nephron epithelium | 1.27e-07 | 15 |
renal tubule | 1.27e-07 | 15 |
nephron tubule | 1.27e-07 | 15 |
nephron | 1.27e-07 | 15 |
uriniferous tubule | 1.27e-07 | 15 |
nephrogenic mesenchyme | 1.27e-07 | 15 |
multilaminar epithelium | 1.68e-07 | 83 |
developing anatomical structure | 2.88e-07 | 581 |
embryo | 3.22e-07 | 592 |
excretory tube | 6.95e-07 | 16 |
kidney epithelium | 6.95e-07 | 16 |
parenchyma | 7.95e-07 | 15 |