FFCP PHASE1:Hg19::chr11:94528192..94528210,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:94528192..94528210,+
|short_description=p@chr11:94528192..94528210,+
|description=CAGE_peak_at_chr11:94528192..94528210,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:94528192..94528210,+ | |||
|description=CAGE_peak_at_chr11:94528192..94528210,+ | |||
|id=chr11:94528192..94528210,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.50e-20!180;CL:0000359!7.43e-16!32;CL:0000680!5.95e-13!57;CL:0000056!5.95e-13!57;CL:0000355!5.95e-13!57;CL:0000192!1.22e-12!42;CL:0000514!1.22e-12!42;CL:0000393!1.68e-11!60;CL:0000211!1.68e-11!60;CL:0000187!1.99e-11!54;CL:0000222!3.82e-11!119;CL:0000183!1.37e-10!59;CL:0000220!7.37e-10!246;CL:0000057!7.47e-10!75;CL:0002321!1.65e-09!248;CL:0002620!1.81e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.87e-23;32!CL:0000192;1.60e-13;43!CL:0000569;4.38e-10;4!CL:0000708;3.34e-09;3!CL:0002539;1.83e-08;10!CL:0000187;3.75e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.53e-24,32;CL:0000192,1.97e-18,43;CL:0000514,1.97e-18,43;CL:0000680,9.27e-17,58;CL:0000056,9.27e-17,58;CL:0000355,9.27e-17,58;CL:0000187,9.63e-15,55;CL:0000393,9.69e-13,61;CL:0000211,9.69e-13,61;CL:0000222,2.91e-12,121;CL:0000569,4.66e-10,4;CL:0000011,4.66e-10,4;CL:0000708,2.93e-09,3;CL:0002539,8.43e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-13;43!CL:0000011;4.38e-10;4!CL:0000355;7.99e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.45e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.59e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.50e-21!79;UBERON:0007798!1.50e-21!79;UBERON:0001637!7.59e-20!42;UBERON:0003509!7.59e-20!42;UBERON:0004572!7.59e-20!42;UBERON:0001981!2.39e-17!60;UBERON:0007500!2.39e-17!60;UBERON:0004537!2.39e-17!60;UBERON:0006965!2.39e-17!60;UBERON:0004535!2.85e-16!110;UBERON:0000055!4.38e-16!69;UBERON:0004872!1.69e-15!84;UBERON:0004573!1.75e-15!33;UBERON:0004571!1.75e-15!33;UBERON:0001009!4.03e-15!113;UBERON:0004290!1.55e-14!70;UBERON:0000914!6.04e-14!83;UBERON:0002329!6.04e-14!83;UBERON:0003077!6.04e-14!83;UBERON:0003059!6.04e-14!83;UBERON:0007282!6.04e-14!83;UBERON:0009618!6.04e-14!83;UBERON:0007285!6.04e-14!83;UBERON:0001134!9.61e-14!61;UBERON:0002036!9.61e-14!61;UBERON:0003082!9.61e-14!61;UBERON:0002385!2.04e-13!63;UBERON:0001015!2.04e-13!63;UBERON:0000383!2.04e-13!63;UBERON:0000486!1.67e-12!82;UBERON:0000490!2.45e-12!138;UBERON:0000947!9.85e-11!21;UBERON:0010191!9.85e-11!21;UBERON:0003914!7.28e-09!118;UBERON:0000119!3.34e-07!312;UBERON:0005256!5.84e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.99e-23;33!UBERON:0004571;3.99e-23;33!UBERON:0001637;3.32e-19;42!UBERON:0003509;3.32e-19;42!UBERON:0004572;3.32e-19;42!UBERON:0000947;3.73e-14;21!UBERON:0010191;3.73e-14;21!UBERON:0002049;1.11e-11;75!UBERON:0007798;1.11e-11;75!UBERON:0006876;3.81e-10;11!UBERON:0007500;3.00e-09;56!UBERON:0001981;3.00e-09;56!UBERON:0004537;3.00e-09;56!UBERON:0003210;3.34e-09;3!UBERON:0005284;1.50e-08;5!UBERON:0004237;1.83e-08;10!UBERON:0004695;1.83e-08;10!UBERON:0002111;1.83e-08;10!UBERON:0004178;1.83e-08;10!UBERON:0001009;6.25e-08;112!UBERON:0000055;1.60e-07;65!UBERON:0004535;5.71e-07;109!UBERON:0002385;7.00e-07;31!UBERON:0001015;7.00e-07;31!UBERON:0000383;7.00e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.71e-26,78;UBERON:0007798,5.71e-26,78;UBERON:0001637,1.18e-25,42;UBERON:0003509,1.18e-25,42;UBERON:0004572,1.18e-25,42;UBERON:0004573,2.51e-25,33;UBERON:0004571,2.51e-25,33;UBERON:0004535,1.21e-22,109;UBERON:0001009,9.33e-22,112;UBERON:0007500,1.06e-19,59;UBERON:0001981,1.06e-19,59;UBERON:0004537,1.06e-19,59;UBERON:0006965,1.06e-19,59;UBERON:0004872,1.15e-18,83;UBERON:0001134,2.41e-18,62;UBERON:0002036,2.41e-18,62;UBERON:0003082,2.41e-18,62;UBERON:0000055,6.89e-18,68;UBERON:0002385,1.48e-17,64;UBERON:0001015,1.48e-17,64;UBERON:0000383,1.48e-17,64;UBERON:0002329,1.13e-16,71;UBERON:0003059,1.13e-16,71;UBERON:0007282,1.13e-16,71;UBERON:0004290,1.13e-16,71;UBERON:0009618,1.13e-16,71;UBERON:0003077,2.41e-16,72;UBERON:0007285,2.41e-16,72;UBERON:0007524,5.05e-16,73;UBERON:0007503,1.52e-14,78;UBERON:0000947,2.66e-14,21;UBERON:0010191,2.66e-14,21;UBERON:0000486,2.97e-13,83;UBERON:0003914,6.13e-11,117;UBERON:0006876,3.19e-10,11;UBERON:0003210,2.93e-09,3;UBERON:0004237,8.43e-09,10;UBERON:0004695,8.43e-09,10;UBERON:0002111,8.43e-09,10;UBERON:0004178,8.43e-09,10;UBERON:0005284,1.74e-08,5;UBERON:0000490,1.79e-08,148;UBERON:0000926,8.51e-08,315;UBERON:0004120,8.51e-08,315;UBERON:0006603,8.51e-08,315;UBERON:0005256,5.75e-07,122 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,1.80808358407193,2.19093027116212,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,1.45990461090791,0.472674085820339,1.33037638477538,1.31752178539689,0,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,1.69592382577203,0.838998872419812,0.275118041940067,0.417989933073621,0,0,0,0,0,0.24406205754817,1.47065232138347,0.81014194788176,0.267899184852239,0.22452937262617,0.337834441449967,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0.496971951695318,1.13967460498122,3.83986624358335,1.14734648299525,0.709336764396714,0,0,0.24666754841716,1.24484414159907,0.67355336034844,0.490385709340376,2.72443369760877,2.88087962239999,0.468642863667593,2.18512053781224,0.570471821544449,0.747243402759005,0.352303495931295,0.485618833104395,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,4.55080680969013,0.718618141816238,0,0.250237039743928,1.10825646193673,0.877955241761676,0.919463387397059,0.45071417671979,0.567160915800105,0.717558542755448,0.213557388818567,0.635795703478686,1.50045548042201,0.721367704669072,0.515281080091258,0.37223371266318,0.506328996723799,0.194874010322397,0.504867548488229,0.552299391853796,0.323292113637624,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,1.88724591328378,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.939269553886573,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0.600686115687835,0,5.83081638595876,2.61576041299968,4.9870034358246,4.13669490424889,0,2.535908257668,0.531876233169741,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,1.62868092146868,0,0,1.20575750823834,0.871533458600294,1.19967589418468,0,0,0,3.35474797688216,0,1.42636905040718,1.15825045334063,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0.415941723061614,0.892144943985809,0,0.702848489956279,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0.195801157462741,0.686286847621712,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.804269605718038,0,0.771048469013278,1.06537035187876,0.246381468041427,1.55776328755086,0.464841513839837,0,0.601519410909855,0.276242966807689,0.459257792658427,0.728364672026868,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0.4046311234222,1.39453664789186,1.88887408098384,0.6970372701606,2.7723022215848,2.66153015158511,0,2.03856641014312,3.2918723950658,1.116475108079,2.21465597303108,0.571890581771475,1.27948895655667,0,1.59101623962968,0,0,0,0.235624804691373,2.62837226045311,0,1.26377536871694,0.48763373908959,2.43713489631284,3.16950440270266,0,0.282810863907425,2.26016233240486,0.551365343546124,1.99031692572366,0.438450885253763,0,0,2.23201414658974,0.30982349809975,1.69017361519345,0.573645408816206,0.0982490410131212,0.7133421029625,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,1.33570446027487,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,2.79935628895627,0.629078458031288,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0.0897576444097721,0,0.31900115973192,0.366390373607449,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0,1.32930774541437,0,0.941798755221676,1.19472429772959,0,0.138674673013139,0.347119476670262,0,0.69647365264322,0.52418000472609,0,0,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0,2.19267079434801,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0.372757606696298,0,0,0.104602846312333,0,0.288950589901519,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr11:94528192..94528210,+ | |||
}} | }} |
Latest revision as of 03:40, 24 July 2015
Short description: | p@chr11:94528192..94528210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94528192..94528210, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.53e-24 | 32 |
smooth muscle cell | 1.97e-18 | 43 |
smooth muscle myoblast | 1.97e-18 | 43 |
muscle precursor cell | 9.27e-17 | 58 |
myoblast | 9.27e-17 | 58 |
multi-potent skeletal muscle stem cell | 9.27e-17 | 58 |
muscle cell | 9.63e-15 | 55 |
electrically responsive cell | 9.69e-13 | 61 |
electrically active cell | 9.69e-13 | 61 |
mesodermal cell | 2.91e-12 | 121 |
cardiac mesenchymal cell | 4.66e-10 | 4 |
migratory trunk neural crest cell | 4.66e-10 | 4 |
leptomeningeal cell | 2.93e-09 | 3 |
aortic smooth muscle cell | 8.43e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.99e-10 | 14 |