FFCP PHASE1:Hg19::chr11:9482656..9482660,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:9482656..9482660,+ | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_at_chr11:9482656..9482660,+ | |||
|id=chr11:9482656..9482660,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.11e-26!140;CL:0000860!1.04e-25!45;CL:0002057!2.31e-25!42;CL:0002031!1.29e-23!124;CL:0002087!1.51e-23!119;CL:0000037!1.80e-22!172;CL:0000566!1.80e-22!172;CL:0000988!1.52e-20!182;CL:0002032!8.07e-20!165;CL:0000837!8.07e-20!165;CL:0000557!2.83e-19!71;CL:0002009!4.34e-19!65;CL:0000766!1.50e-18!76;CL:0002194!5.67e-18!63;CL:0000576!5.67e-18!63;CL:0000040!5.67e-18!63;CL:0000559!5.67e-18!63;CL:0000839!4.92e-17!70;CL:0000763!6.33e-14!112;CL:0000049!6.33e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-20;33!CL:0002057;6.02e-20;33!CL:0000473;4.08e-15;39!CL:0000234;4.08e-15;39!CL:0000576;1.25e-13;48!CL:0000766;4.29e-11;69!CL:0002087;1.09e-07;104!CL:0000738;2.92e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.89e-27,136;CL:0000860,7.72e-27,42;CL:0002057,7.72e-27,42;CL:0000473,1.66e-24,48;CL:0000234,1.66e-24,48;CL:0002031,3.30e-24,120;CL:0002087,8.79e-24,115;CL:0000037,2.32e-22,168;CL:0000557,3.01e-21,67;CL:0000988,6.51e-21,177;CL:0002009,1.17e-20,61;CL:0000766,1.60e-20,72;CL:0002032,1.32e-19,161;CL:0000837,1.32e-19,161;CL:0002194,1.90e-19,59;CL:0000576,1.90e-19,59;CL:0000040,1.90e-19,59;CL:0000559,1.90e-19,59;CL:0000839,7.22e-19,66;CL:0000763,2.01e-14,108;CL:0000049,2.01e-14,108;CL:0002393,9.27e-07,9;CL:0002397,9.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.76e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.08e-17!80;UBERON:0002390!8.31e-15!102;UBERON:0003061!8.31e-15!102;UBERON:0001474!5.65e-14!86;UBERON:0002193!5.38e-12!112;UBERON:0002405!2.70e-10!115;UBERON:0004765!7.23e-10!101;UBERON:0001434!7.23e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-18,76;UBERON:0002390,5.11e-16,98;UBERON:0003061,5.11e-16,98;UBERON:0001474,1.64e-15,82;UBERON:0002405,2.14e-14,93;UBERON:0004765,8.09e-14,90;UBERON:0002193,4.06e-13,108;UBERON:0001434,5.69e-10,100;UBERON:0003081,4.59e-07,203 | |||
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| |||
|short_description=p@chr11:9482656..9482660,+ | |||
}} |
Latest revision as of 03:42, 24 July 2015
Short description: | p@chr11:9482656..9482660, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9482656..9482660, + |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.89e-27 | 136 |
classical monocyte | 7.72e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.72e-27 | 42 |
defensive cell | 1.66e-24 | 48 |
phagocyte | 1.66e-24 | 48 |
hematopoietic lineage restricted progenitor cell | 3.30e-24 | 120 |
nongranular leukocyte | 8.79e-24 | 115 |
hematopoietic stem cell | 2.32e-22 | 168 |
granulocyte monocyte progenitor cell | 3.01e-21 | 67 |
hematopoietic cell | 6.51e-21 | 177 |
macrophage dendritic cell progenitor | 1.17e-20 | 61 |
myeloid leukocyte | 1.60e-20 | 72 |
hematopoietic oligopotent progenitor cell | 1.32e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-19 | 161 |
monopoietic cell | 1.90e-19 | 59 |
monocyte | 1.90e-19 | 59 |
monoblast | 1.90e-19 | 59 |
promonocyte | 1.90e-19 | 59 |
myeloid lineage restricted progenitor cell | 7.22e-19 | 66 |
myeloid cell | 2.01e-14 | 108 |
common myeloid progenitor | 2.01e-14 | 108 |
intermediate monocyte | 9.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-18 | 76 |
hematopoietic system | 5.11e-16 | 98 |
blood island | 5.11e-16 | 98 |
bone element | 1.64e-15 | 82 |
immune system | 2.14e-14 | 93 |
skeletal element | 8.09e-14 | 90 |
hemolymphoid system | 4.06e-13 | 108 |
skeletal system | 5.69e-10 | 100 |
lateral plate mesoderm | 4.59e-07 | 203 |