FFCP PHASE1:Hg19::chr12:103353295..103353316,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:103353295..103353316,- | |||
|coexpression_cluster_id=C740 | |coexpression_cluster_id=C740 | ||
|description=CAGE_peak_at_chr12:103353295..103353316,- | |description=CAGE_peak_at_chr12:103353295..103353316,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!8.94e-07!8 | |ontology_enrichment_celltype=CL:0000047!8.94e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.23e-18;1!CL:0000164;6.23e-18;1!CL:0000502;6.23e-18;1!CL:0000172;6.23e-18;1!CL:0000173;6.23e-18;1 | |ontology_enrichment_celltype_v019=CL:0000167;6.23e-18;1!CL:0000164;6.23e-18;1!CL:0000502;6.23e-18;1!CL:0000172;6.23e-18;1!CL:0000173;6.23e-18;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.23e-18,1;CL:0000164,6.23e-18,1;CL:0000502,6.23e-18,1;CL:0000172,6.23e-18,1;CL:0000173,6.23e-18,1;CL:0002351,6.23e-18,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.23e-18;1 | |ontology_enrichment_development_v019=CL:0002351;6.23e-18;1 | ||
|ontology_enrichment_disease=DOID:169!4.83e-09!6 | |ontology_enrichment_disease=DOID:169!4.83e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:4430;6.23e-18;1!DOID:169;4.55e-12;6!DOID:171;1.33e-07;10 | |ontology_enrichment_disease_v019=DOID:4430;6.23e-18;1!DOID:169;4.55e-12;6!DOID:171;1.33e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,6.23e-18,1;DOID:169,4.55e-12,6;DOID:171,1.33e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.94e-19!94;UBERON:0001016!3.94e-19!94;UBERON:0001017!7.33e-18!82;UBERON:0005743!9.56e-17!86;UBERON:0001049!1.09e-15!57;UBERON:0005068!1.09e-15!57;UBERON:0006241!1.09e-15!57;UBERON:0007135!1.09e-15!57;UBERON:0000955!7.08e-12!69;UBERON:0006238!7.08e-12!69;UBERON:0002616!1.07e-11!59;UBERON:0003075!3.41e-11!86;UBERON:0007284!3.41e-11!86;UBERON:0007023!4.83e-11!115;UBERON:0002780!1.00e-10!41;UBERON:0001890!1.00e-10!41;UBERON:0006240!1.00e-10!41;UBERON:0002346!1.80e-10!90;UBERON:0003080!2.10e-10!42;UBERON:0004121!3.73e-10!169;UBERON:0000924!9.41e-10!173;UBERON:0006601!9.41e-10!173;UBERON:0001893!6.39e-08!34;UBERON:0000200!8.58e-08!6;UBERON:0000007!2.22e-07!2;UBERON:0003056!2.39e-07!61;UBERON:0000153!3.49e-07!129;UBERON:0007811!3.49e-07!129;UBERON:0002619!5.18e-07!22;UBERON:0001869!5.96e-07!32;UBERON:0003076!7.92e-07!15;UBERON:0003057!7.92e-07!15;UBERON:0002791!8.61e-07!33 | |ontology_enrichment_uberon=UBERON:0000073!3.94e-19!94;UBERON:0001016!3.94e-19!94;UBERON:0001017!7.33e-18!82;UBERON:0005743!9.56e-17!86;UBERON:0001049!1.09e-15!57;UBERON:0005068!1.09e-15!57;UBERON:0006241!1.09e-15!57;UBERON:0007135!1.09e-15!57;UBERON:0000955!7.08e-12!69;UBERON:0006238!7.08e-12!69;UBERON:0002616!1.07e-11!59;UBERON:0003075!3.41e-11!86;UBERON:0007284!3.41e-11!86;UBERON:0007023!4.83e-11!115;UBERON:0002780!1.00e-10!41;UBERON:0001890!1.00e-10!41;UBERON:0006240!1.00e-10!41;UBERON:0002346!1.80e-10!90;UBERON:0003080!2.10e-10!42;UBERON:0004121!3.73e-10!169;UBERON:0000924!9.41e-10!173;UBERON:0006601!9.41e-10!173;UBERON:0001893!6.39e-08!34;UBERON:0000200!8.58e-08!6;UBERON:0000007!2.22e-07!2;UBERON:0003056!2.39e-07!61;UBERON:0000153!3.49e-07!129;UBERON:0007811!3.49e-07!129;UBERON:0002619!5.18e-07!22;UBERON:0001869!5.96e-07!32;UBERON:0003076!7.92e-07!15;UBERON:0003057!7.92e-07!15;UBERON:0002791!8.61e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-15;10!UBERON:0000178;1.91e-10;15!UBERON:0000179;1.91e-10;15!UBERON:0000463;1.91e-10;15!UBERON:0000478;9.79e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-15;10!UBERON:0000178;1.91e-10;15!UBERON:0000179;1.91e-10;15!UBERON:0000463;1.91e-10;15!UBERON:0000478;9.79e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.34e-15,10;UBERON:0000358,2.34e-15,10;UBERON:0000307,2.34e-15,10;UBERON:0000091,2.34e-15,10;UBERON:0000087,2.34e-15,10;UBERON:0007010,2.34e-15,10;UBERON:0007806,2.34e-15,10;UBERON:0008780,2.34e-15,10;UBERON:0005728,2.34e-15,10;UBERON:0000178,1.88e-10,15;UBERON:0000179,1.88e-10,15;UBERON:0000463,1.88e-10,15;UBERON:0000478,9.69e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.656804715599566,1.02324015707783,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,1.97702302314405,1.67075119208729,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,8.57974989309823,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0.895260599125562,3.88169321028054,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9309126365674,0,0,0,0.109940516745429,9.05777061400041,0,0.218559560503957,20.693961039907,0,2.12108892391463,0.588925401344836,0.297046400327086,0,0,0,0,0.699588091474503,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.656804715599566,1.02324015707783,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,1.97702302314405,1.67075119208729,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,8.57974989309823,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0.895260599125562,3.88169321028054,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9309126365674,0,0,0,0.109940516745429,9.05777061400041,0,0.218559560503957,20.693961039907,0,2.12108892391463,0.588925401344836,0.297046400327086,0,0,0,0,0.699588091474503,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr12:103353295..103353316,- | |short_description=p@chr12:103353295..103353316,- | ||
}} | }} |
Latest revision as of 04:11, 24 July 2015
Short description: | p@chr12:103353295..103353316, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:103353295..103353316, - |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.23e-18 | 1 |
enteroendocrine cell | 6.23e-18 | 1 |
type D enteroendocrine cell | 6.23e-18 | 1 |
somatostatin secreting cell | 6.23e-18 | 1 |
pancreatic D cell | 6.23e-18 | 1 |
progenitor cell of endocrine pancreas | 6.23e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.34e-15 | 10 |
blastocyst | 2.34e-15 | 10 |
blastula | 2.34e-15 | 10 |
bilaminar disc | 2.34e-15 | 10 |
inner cell mass | 2.34e-15 | 10 |
cleaving embryo | 2.34e-15 | 10 |
connecting stalk | 2.34e-15 | 10 |
inner cell mass derived epiblast | 2.34e-15 | 10 |
extraembryonic mesoderm | 2.34e-15 | 10 |
blood | 1.88e-10 | 15 |
haemolymphatic fluid | 1.88e-10 | 15 |
organism substance | 1.88e-10 | 15 |
extraembryonic structure | 9.69e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.23e-18 | 1 |
neuroendocrine tumor | 4.55e-12 | 6 |
neuroectodermal tumor | 1.33e-07 | 10 |