FFCP PHASE1:Hg19::chr12:104681545..104681558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:104681545..104681558,+ | |||
|description=CAGE_peak_at_chr12:104681545..104681558,+ | |description=CAGE_peak_at_chr12:104681545..104681558,+ | ||
|id=chr12:104681545..104681558,+ | |id=chr12:104681545..104681558,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.87e-14!19;CL:0000860!3.73e-11!45;CL:0002057!1.57e-09!42;CL:0002009!2.37e-07!65;CL:0002194!4.72e-07!63;CL:0000576!4.72e-07!63;CL:0000040!4.72e-07!63;CL:0000559!4.72e-07!63 | |ontology_enrichment_celltype=CL:0000077!1.87e-14!19;CL:0000860!3.73e-11!45;CL:0002057!1.57e-09!42;CL:0002009!2.37e-07!65;CL:0002194!4.72e-07!63;CL:0000576!4.72e-07!63;CL:0000040!4.72e-07!63;CL:0000559!4.72e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000077;7.07e-18;19!CL:0000860;1.85e-10;33!CL:0002057;1.85e-10;33!CL:0000473;2.50e-08;39!CL:0000234;2.50e-08;39!CL:0000511;6.92e-07;1!CL:0002625;6.92e-07;1!CL:0002581;6.92e-07;1!CL:0000216;6.92e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.15e-17,19;CL:0000860,1.73e-09,42;CL:0002057,1.73e-09,42;CL:0000473,4.08e-08,48;CL:0000234,4.08e-08,48;CL:0002009,2.19e-07,61;CL:0000511,3.78e-07,1;CL:0002625,3.78e-07,1;CL:0000216,3.78e-07,1;CL:0002581,6.02e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.12e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.09e-08;3!DOID:127;1.09e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.21e-09,3;DOID:127,7.21e-09,3;DOID:0060072,7.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.09e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.92e-07;1!UBERON:0001343;6.92e-07;1!UBERON:0007195;6.92e-07;1!UBERON:0004910;6.92e-07;1!UBERON:0004813;6.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.78e-07,1;UBERON:0001343,3.78e-07,1;UBERON:0004910,3.78e-07,1;UBERON:0005154,3.78e-07,1;UBERON:0005295,3.78e-07,1;UBERON:0004813,3.78e-07,1;UBERON:0005297,3.78e-07,1;UBERON:0005294,3.78e-07,1;UBERON:0010141,3.78e-07,1;UBERON:0005891,3.78e-07,1;UBERON:0002371,8.24e-07,76 | |||
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| ||
|short_description=p@chr12:104681545..104681558,+ | |short_description=p@chr12:104681545..104681558,+ | ||
}} | }} |
Latest revision as of 04:17, 24 July 2015
Short description: | p@chr12:104681545..104681558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104681545..104681558, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.15e-17 | 19 |
classical monocyte | 1.73e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-09 | 42 |
defensive cell | 4.08e-08 | 48 |
phagocyte | 4.08e-08 | 48 |
macrophage dendritic cell progenitor | 2.19e-07 | 61 |
androgen binding protein secreting cell | 3.78e-07 | 1 |
seminiferous tubule epithelial cell | 3.78e-07 | 1 |
Sertoli cell | 3.78e-07 | 1 |
perirenal preadipocyte | 6.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.78e-07 | 1 |
seminiferous tubule of testis | 3.78e-07 | 1 |
epithelium of male gonad | 3.78e-07 | 1 |
epithelial cord | 3.78e-07 | 1 |
sex cord | 3.78e-07 | 1 |
seminiferous tubule epithelium | 3.78e-07 | 1 |
testis sex cord | 3.78e-07 | 1 |
genital ridge | 3.78e-07 | 1 |
primitive sex cord of indifferent gonad | 3.78e-07 | 1 |
coelomic epithelium | 3.78e-07 | 1 |
bone marrow | 8.24e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.21e-09 | 3 |
leiomyoma | 7.21e-09 | 3 |
benign neoplasm | 7.59e-07 | 4 |