FFCP PHASE1:Hg19::chr12:118542383..118542415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:118542383..118542415,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr12:118542383..118542415,- | |description=CAGE_peak_at_chr12:118542383..118542415,- | ||
Latest revision as of 05:32, 24 July 2015
| Short description: | p@chr12:118542383..118542415, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr12:118542383..118542415, - |
| Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr12:118542383..118542415- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 3.52e-90 | 7 |
| germ cell | 3.52e-90 | 7 |
| vein endothelial cell | 7.25e-08 | 6 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 4.74e-79 | 8 |
| male reproductive organ | 8.62e-58 | 11 |
| gonad | 9.67e-31 | 21 |
| indifferent external genitalia | 9.67e-31 | 21 |
| indifferent gonad | 9.67e-31 | 21 |
| gonad primordium | 9.67e-31 | 21 |
| external genitalia | 2.19e-29 | 22 |
| male organism | 2.19e-29 | 22 |
| male reproductive system | 2.19e-29 | 22 |
| body cavity | 1.76e-14 | 46 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 2.19e-29 | 22 |
| germ cell cancer | 2.19e-29 | 22 |
Showing 1 to 2 of 2 entries
