FFCP PHASE1:Hg19::chr12:122459724..122459737,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:122459724..122459737,- to FFCP PHASE1:Hg19::chr12:122459724..122459737,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:122459724..122459737,- | |||
|description=CAGE_peak_at_chr12:122459724..122459737,- | |||
|id=chr12:122459724..122459737,- | |||
|ontology_enrichment_celltype=CL:0000236!6.64e-09!14;CL:0000945!1.41e-08!24;CL:0000826!1.41e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.13e-32;24!CL:0000236;1.96e-29;13!CL:0000542;4.87e-15;53!CL:0000784;1.59e-11;3!CL:0000785;1.16e-09;1!CL:0002581;1.16e-09;1!CL:0000819;1.16e-09;1!CL:0000511;2.88e-09;1!CL:0002625;2.88e-09;1!CL:0000216;2.88e-09;1!CL:0000313;2.88e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.08e-32,24;CL:0000826,8.08e-32,24;CL:0000236,3.98e-27,14;CL:0000542,8.57e-20,53;CL:0000051,8.57e-20,53;CL:0000838,7.29e-17,52;CL:0000784,8.83e-12,3;CL:0002581,1.03e-09,1;CL:0000819,1.12e-09,1;CL:0002087,1.99e-09,115;CL:0000511,2.16e-09,1;CL:0002625,2.16e-09,1;CL:0000216,2.16e-09,1;CL:0000313,2.35e-09,1;CL:0000738,5.21e-09,136;CL:0000037,5.34e-08,168;CL:0002031,1.71e-07,120;CL:0000988,1.86e-07,177;CL:0002032,3.23e-07,161;CL:0000837,3.23e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;4.87e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.88e-13;10!DOID:0060073;1.16e-09;1!DOID:8675;1.16e-09;1!DOID:12603;1.16e-09;1!DOID:2152;2.88e-09;1!DOID:6193;2.88e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.15e-13,10;DOID:0060073,1.12e-09,1;DOID:8675,1.12e-09,1;DOID:12603,1.32e-09,1;DOID:2152,2.35e-09,1;DOID:6193,5.28e-09,1;DOID:2531,4.51e-07,51;DOID:0060083,4.51e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002780!9.16e-09!41;UBERON:0001890!9.16e-09!41;UBERON:0006240!9.16e-09!41;UBERON:0007023!1.01e-08!115;UBERON:0003080!2.25e-08!42;UBERON:0001893!1.23e-07!34;UBERON:0002020!1.65e-07!34;UBERON:0003528!1.65e-07!34;UBERON:0001049!2.36e-07!57;UBERON:0005068!2.36e-07!57;UBERON:0006241!2.36e-07!57;UBERON:0007135!2.36e-07!57;UBERON:0002791!3.86e-07!33;UBERON:0002616!8.03e-07!59;UBERON:0000955!8.12e-07!69;UBERON:0006238!8.12e-07!69;UBERON:0001869!9.67e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.37e-17;2!UBERON:0005058;3.37e-17;2!UBERON:0009113;3.37e-17;2!UBERON:0004909;8.22e-17;2!UBERON:0001136;2.88e-09;1!UBERON:0001343;2.88e-09;1!UBERON:0004911;2.88e-09;1!UBERON:0004910;2.88e-09;1!UBERON:0004813;2.88e-09;1!UBERON:0004177;2.07e-07;5!UBERON:0005057;2.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,5.08e-17,2;UBERON:0001136,2.16e-09,1;UBERON:0001343,2.16e-09,1;UBERON:0004910,2.16e-09,1;UBERON:0005154,2.16e-09,1;UBERON:0005295,2.16e-09,1;UBERON:0004813,2.16e-09,1;UBERON:0005297,2.16e-09,1;UBERON:0005294,2.16e-09,1;UBERON:0010141,2.16e-09,1;UBERON:0005891,2.16e-09,1;UBERON:0004911,2.35e-09,1;UBERON:0002370,3.84e-09,4;UBERON:0005058,3.84e-09,4;UBERON:0009113,3.84e-09,4;UBERON:0003295,3.84e-09,4;UBERON:0005562,3.84e-09,4 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,5.65510564236202,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36910889009705,0.889509253863555,1.28019066769952,1.20118796110804,1.14950487990897,1.32208974556972,1.90810750907073,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.664789802594326,1.66943437013739,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,2.96836132889982,0,0,0.164254312027618,0,0.348631135379878,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,2.04383492638291,0.577076851905779,1.9919716137556,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.500547425135725,0,0,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.828851746593443,0,0.102268682502155,0.123084805461069,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0,0,0,0.361789315876224,0,0.221158519862449,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.337005664903385,0,0.702793337176017,2.73682183823499,0,0.242780379534093,0,0,0,0,0.150323419414493,0.414752765588989,0,0,0,0,0.853828638089378,0.416024019039416,0.173559738335131,0,0.0870592065804026,0.34945333648406,1.0319161948297,0,0,0,0.0969890164884194,0.0882561266915003,0,0.274083849293502,0,0.633107959558787,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0.343609788497747,0.171594997861965,0,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.268733889946905,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.196854963029498,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0,0.546746009922222,0,0.0788057072991982,0.367182116944987,0.316801009558219,0,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0,0,0,0.496166021811951,0.197611631897944,6.45500771418748,0,0,0.2506898940227,0,0,0.785270481251171,0,0.122026264901963,0.500763722825999,0,0,0.310482014706917,0.138348634936231,0.249960815924213,0.303298235083296,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0,0.157265941855896,0.327628914576042,0.509197589862076,0,0.123935764259002,0,0,0.315446980005013,0,0,0,0.899209151350433,1.41696576325585,0.319267718114302,0.205116364240755,0,0.691572524642179,0.322951291263702,0,0,0.11796972334774,0,0.346576998451015,0,0,0.397832444232549,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0.672567444437648,0,0.455324382702595,0,0.691403925334676,0,0.339848664884159,0.131545547125698,0.354581522651905,0.333694205676207,0.235479278551542,0.314231179832004,0,0,0.21592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| 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| ||
|short_description=p@chr12:122459724..122459737,- | |||
}} | }} |
Latest revision as of 06:03, 24 July 2015
Short description: | p@chr12:122459724..122459737, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122459724..122459737, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.08e-32 | 24 |
pro-B cell | 8.08e-32 | 24 |
B cell | 3.98e-27 | 14 |
lymphocyte | 8.57e-20 | 53 |
common lymphoid progenitor | 8.57e-20 | 53 |
lymphoid lineage restricted progenitor cell | 7.29e-17 | 52 |
plasmacytoid dendritic cell | 8.83e-12 | 3 |
perirenal preadipocyte | 1.03e-09 | 1 |
B-1 B cell | 1.12e-09 | 1 |
nongranular leukocyte | 1.99e-09 | 115 |
androgen binding protein secreting cell | 2.16e-09 | 1 |
seminiferous tubule epithelial cell | 2.16e-09 | 1 |
Sertoli cell | 2.16e-09 | 1 |
serous secreting cell | 2.35e-09 | 1 |
leukocyte | 5.21e-09 | 136 |
hematopoietic stem cell | 5.34e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 1.71e-07 | 120 |
hematopoietic cell | 1.86e-07 | 177 |
hematopoietic oligopotent progenitor cell | 3.23e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 5.08e-17 | 2 |
mesothelium | 2.16e-09 | 1 |
seminiferous tubule of testis | 2.16e-09 | 1 |
epithelium of male gonad | 2.16e-09 | 1 |
epithelial cord | 2.16e-09 | 1 |
sex cord | 2.16e-09 | 1 |
seminiferous tubule epithelium | 2.16e-09 | 1 |
testis sex cord | 2.16e-09 | 1 |
genital ridge | 2.16e-09 | 1 |
primitive sex cord of indifferent gonad | 2.16e-09 | 1 |
coelomic epithelium | 2.16e-09 | 1 |
epithelium of female gonad | 2.35e-09 | 1 |
thymus | 3.84e-09 | 4 |
hemolymphoid system gland | 3.84e-09 | 4 |
thymic region | 3.84e-09 | 4 |
pharyngeal gland | 3.84e-09 | 4 |
thymus primordium | 3.84e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.15e-13 | 10 |
lymphatic system cancer | 1.12e-09 | 1 |
lymphosarcoma | 1.12e-09 | 1 |
acute leukemia | 1.32e-09 | 1 |
ovary epithelial cancer | 2.35e-09 | 1 |
epithelioid sarcoma | 5.28e-09 | 1 |
hematologic cancer | 4.51e-07 | 51 |
immune system cancer | 4.51e-07 | 51 |