FFCP PHASE1:Hg19::chr12:125400956..125400967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125400956..125400967,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:125400956..125400967,- | |description=CAGE_peak_at_chr12:125400956..125400967,- | ||
|id=chr12:125400956..125400967,- | |id=chr12:125400956..125400967,- | ||
|ontology_enrichment_celltype=CL:0002057!2.58e-35!42;CL:0000860!1.66e-34!45;CL:0002009!8.36e-24!65;CL:0002194!5.47e-23!63;CL:0000576!5.47e-23!63;CL:0000040!5.47e-23!63;CL:0000559!5.47e-23!63;CL:0000557!5.44e-21!71;CL:0000766!1.99e-20!76;CL:0000839!8.91e-20!70;CL:0000763!7.57e-12!112;CL:0000049!7.57e-12!112;CL:0002087!2.40e-10!119;CL:0000738!1.04e-09!140;CL:0002031!1.16e-09!124 | |ontology_enrichment_celltype=CL:0002057!2.58e-35!42;CL:0000860!1.66e-34!45;CL:0002009!8.36e-24!65;CL:0002194!5.47e-23!63;CL:0000576!5.47e-23!63;CL:0000040!5.47e-23!63;CL:0000559!5.47e-23!63;CL:0000557!5.44e-21!71;CL:0000766!1.99e-20!76;CL:0000839!8.91e-20!70;CL:0000763!7.57e-12!112;CL:0000049!7.57e-12!112;CL:0002087!2.40e-10!119;CL:0000738!1.04e-09!140;CL:0002031!1.16e-09!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-42;33!CL:0002057;2.28e-42;33!CL:0000473;9.48e-30;39!CL:0000234;9.48e-30;39!CL:0000576;3.71e-24;48!CL:0002591;6.21e-15;1!CL:0000766;2.11e-12;69!CL:0002087;7.13e-09;104!CL:0000763;5.86e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.11e-44,42;CL:0002057,5.11e-44,42;CL:0000473,2.26e-38,48;CL:0000234,2.26e-38,48;CL:0002194,1.84e-30,59;CL:0000576,1.84e-30,59;CL:0000040,1.84e-30,59;CL:0000559,1.84e-30,59;CL:0002009,1.94e-29,61;CL:0000839,3.76e-27,66;CL:0000557,9.84e-27,67;CL:0000766,8.12e-25,72;CL:0000763,3.46e-16,108;CL:0000049,3.46e-16,108;CL:0002087,3.96e-15,115;CL:0002591,6.22e-15,1;CL:0002031,1.91e-14,120;CL:0000738,1.35e-12,136;CL:0002032,1.98e-10,161;CL:0000837,1.98e-10,161;CL:0000037,6.16e-10,168;CL:0000988,2.33e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-29;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.41e-17!80;UBERON:0001474!1.04e-15!86;UBERON:0002390!8.58e-13!102;UBERON:0003061!8.58e-13!102;UBERON:0002193!1.02e-12!112;UBERON:0004765!4.74e-12!101;UBERON:0001434!4.74e-12!101;UBERON:0002405!2.90e-11!115;UBERON:0003081!5.53e-10!216;UBERON:0002204!2.03e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.08e-08;2!UBERON:0002012;4.08e-08;2!UBERON:0008886;4.08e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-23,76;UBERON:0001474,1.13e-21,82;UBERON:0004765,1.18e-19,90;UBERON:0002405,5.52e-19,93;UBERON:0002390,5.86e-18,98;UBERON:0003061,5.86e-18,98;UBERON:0001434,1.41e-17,100;UBERON:0002193,3.46e-16,108;UBERON:0002204,6.30e-12,167;UBERON:0003081,3.09e-11,203;UBERON:0000078,4.09e-08,2;UBERON:0007497,4.09e-08,2;UBERON:0003643,4.09e-08,2;UBERON:0003504,4.09e-08,2;UBERON:0003469,4.09e-08,2;UBERON:0003496,4.09e-08,2;UBERON:0002012,4.09e-08,2;UBERON:0008886,4.09e-08,2;UBERON:0007303,4.09e-08,2;UBERON:0002061,4.09e-08,2;UBERON:0005432,4.09e-08,2;UBERON:0004363,4.09e-08,2 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,1.7261543539329,1.2808035326455,1.18241114944293,3.44745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,7.03992952453076,1.92557416245656,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,1.16083695451434,0,1.24564449799115,1.50749199154046,0,0.217188844705117,0,1.10483290796269,0.949387162322653,0.211255286311942,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26016233240486,0.551365343546124,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 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| ||
|short_description=p@chr12:125400956..125400967,- | |short_description=p@chr12:125400956..125400967,- | ||
}} | }} |
Latest revision as of 06:30, 24 July 2015
Short description: | p@chr12:125400956..125400967, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125400956..125400967, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.11e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-44 | 42 |
defensive cell | 2.26e-38 | 48 |
phagocyte | 2.26e-38 | 48 |
monopoietic cell | 1.84e-30 | 59 |
monocyte | 1.84e-30 | 59 |
monoblast | 1.84e-30 | 59 |
promonocyte | 1.84e-30 | 59 |
macrophage dendritic cell progenitor | 1.94e-29 | 61 |
myeloid lineage restricted progenitor cell | 3.76e-27 | 66 |
granulocyte monocyte progenitor cell | 9.84e-27 | 67 |
myeloid leukocyte | 8.12e-25 | 72 |
myeloid cell | 3.46e-16 | 108 |
common myeloid progenitor | 3.46e-16 | 108 |
nongranular leukocyte | 3.96e-15 | 115 |
smooth muscle cell of the pulmonary artery | 6.22e-15 | 1 |
hematopoietic lineage restricted progenitor cell | 1.91e-14 | 120 |
leukocyte | 1.35e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-10 | 161 |
hematopoietic stem cell | 6.16e-10 | 168 |
hematopoietic cell | 2.33e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-23 | 76 |
bone element | 1.13e-21 | 82 |
skeletal element | 1.18e-19 | 90 |
immune system | 5.52e-19 | 93 |
hematopoietic system | 5.86e-18 | 98 |
blood island | 5.86e-18 | 98 |
skeletal system | 1.41e-17 | 100 |
hemolymphoid system | 3.46e-16 | 108 |
musculoskeletal system | 6.30e-12 | 167 |
lateral plate mesoderm | 3.09e-11 | 203 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-08 | 2 |
developing epithelial placode | 4.09e-08 | 2 |
respiratory system arterial blood vessel | 4.09e-08 | 2 |
respiratory system blood vessel | 4.09e-08 | 2 |
respiratory system artery | 4.09e-08 | 2 |
head blood vessel | 4.09e-08 | 2 |
pulmonary artery | 4.09e-08 | 2 |
pulmonary vascular system | 4.09e-08 | 2 |
pharyngeal vasculature | 4.09e-08 | 2 |
truncus arteriosus | 4.09e-08 | 2 |
aortic sac | 4.09e-08 | 2 |
pharyngeal arch artery | 4.09e-08 | 2 |