FFCP PHASE1:Hg19::chr12:131476821..131476831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:131476821..131476831,- | |||
|coexpression_cluster_id=C3257 | |coexpression_cluster_id=C3257 | ||
|description=CAGE_peak_at_chr12:131476821..131476831,- | |description=CAGE_peak_at_chr12:131476821..131476831,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.92e-53;3!CL:0000153;1.18e-18;9!CL:0000447;1.18e-18;9!CL:0000135;1.71e-14;3!CL:0000388;1.71e-14;3!CL:0000499;1.46e-13;28!CL:0000327;1.24e-11;15 | |ontology_enrichment_celltype_v019=CL:0000214;1.92e-53;3!CL:0000153;1.18e-18;9!CL:0000447;1.18e-18;9!CL:0000135;1.71e-14;3!CL:0000388;1.71e-14;3!CL:0000499;1.46e-13;28!CL:0000327;1.24e-11;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.87e-53,3;CL:0000153,1.35e-18,9;CL:0000447,1.35e-18,9;CL:0000135,1.60e-14,3;CL:0000388,1.60e-14,3;CL:0000499,1.53e-13,28;CL:0000327,1.34e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.26e-11;4!UBERON:0007284;3.26e-11;4 | |ontology_enrichment_development_v019=UBERON:0005062;3.26e-11;4!UBERON:0007284;3.26e-11;4 | ||
|ontology_enrichment_disease=DOID:114!7.58e-09!2 | |ontology_enrichment_disease=DOID:114!7.58e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.60e-11!115;UBERON:0000369!2.68e-08!4;UBERON:0002435!2.68e-08!4;UBERON:0000204!2.68e-08!4;UBERON:0010082!2.68e-08!4 | |ontology_enrichment_uberon=UBERON:0007023!4.60e-11!115;UBERON:0000369!2.68e-08!4;UBERON:0002435!2.68e-08!4;UBERON:0000204!2.68e-08!4;UBERON:0010082!2.68e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.92e-53;3!UBERON:0007616;1.92e-53;3!UBERON:0002217;1.92e-53;3!UBERON:0002018;1.92e-53;3!UBERON:0002135;1.81e-40;1!UBERON:0002133;5.15e-21;2!UBERON:0004905;7.72e-21;8!UBERON:0000982;7.72e-21;8!UBERON:0004770;7.72e-21;8!UBERON:0004457;1.18e-18;9!UBERON:0000042;1.18e-18;9!UBERON:0007846;1.71e-14;3!UBERON:0003978;1.71e-14;3!UBERON:0000946;1.71e-14;3!UBERON:0000043;1.71e-14;3!UBERON:0007845;1.71e-14;3!UBERON:0000486;2.84e-14;12!UBERON:0006914;2.24e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0006915;1.92e-53;3!UBERON:0007616;1.92e-53;3!UBERON:0002217;1.92e-53;3!UBERON:0002018;1.92e-53;3!UBERON:0002135;1.81e-40;1!UBERON:0002133;5.15e-21;2!UBERON:0004905;7.72e-21;8!UBERON:0000982;7.72e-21;8!UBERON:0004770;7.72e-21;8!UBERON:0004457;1.18e-18;9!UBERON:0000042;1.18e-18;9!UBERON:0007846;1.71e-14;3!UBERON:0003978;1.71e-14;3!UBERON:0000946;1.71e-14;3!UBERON:0000043;1.71e-14;3!UBERON:0007845;1.71e-14;3!UBERON:0000486;2.84e-14;12!UBERON:0006914;2.24e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.87e-53,3;UBERON:0007616,2.87e-53,3;UBERON:0002217,2.87e-53,3;UBERON:0002018,2.87e-53,3;UBERON:0002135,9.91e-41,1;UBERON:0002133,3.81e-21,2;UBERON:0004905,8.98e-21,8;UBERON:0000982,8.98e-21,8;UBERON:0004770,8.98e-21,8;UBERON:0003978,1.40e-14,3;UBERON:0009751,1.40e-14,3;UBERON:0000946,1.40e-14,3;UBERON:0002523,1.40e-14,3;UBERON:0005983,1.40e-14,3;UBERON:0002165,1.40e-14,3;UBERON:0002062,1.40e-14,3;UBERON:0007280,1.40e-14,3;UBERON:0007846,1.60e-14,3;UBERON:0000043,1.60e-14,3;UBERON:0007845,1.60e-14,3;UBERON:0004457,3.14e-14,12;UBERON:0000042,3.14e-14,12;UBERON:0006914,2.35e-07,25;UBERON:0004797,5.38e-07,7 | |||
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| ||
|short_description=p@chr12:131476821..131476831,- | |short_description=p@chr12:131476821..131476831,- | ||
}} | }} |
Latest revision as of 06:47, 24 July 2015
Short description: | p@chr12:131476821..131476831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:131476821..131476831, - |
Coexpression cluster: | C3257_Synoviocyte_tenocyte_left_heart_gall_mesenchymal_Astrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.87e-53 | 3 |
GAG secreting cell | 1.35e-18 | 9 |
carbohydrate secreting cell | 1.35e-18 | 9 |
fibrocyte | 1.60e-14 | 3 |
tendon cell | 1.60e-14 | 3 |
stromal cell | 1.53e-13 | 28 |
extracellular matrix secreting cell | 1.34e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.87e-53 | 3 |
layer of synovial tissue | 2.87e-53 | 3 |
synovial joint | 2.87e-53 | 3 |
synovial membrane of synovial joint | 2.87e-53 | 3 |
mitral valve | 9.91e-41 | 1 |
atrioventricular valve | 3.81e-21 | 2 |
articulation | 8.98e-21 | 8 |
skeletal joint | 8.98e-21 | 8 |
articular system | 8.98e-21 | 8 |
valve | 1.40e-14 | 3 |
cardiac mesenchyme | 1.40e-14 | 3 |
cardial valve | 1.40e-14 | 3 |
tunica intima | 1.40e-14 | 3 |
heart layer | 1.40e-14 | 3 |
endocardium | 1.40e-14 | 3 |
endocardial cushion | 1.40e-14 | 3 |
presumptive endocardium | 1.40e-14 | 3 |
dense regular connective tissue | 1.60e-14 | 3 |
tendon | 1.60e-14 | 3 |
regular connective tissue | 1.60e-14 | 3 |
cavity lining | 3.14e-14 | 12 |
serous membrane | 3.14e-14 | 12 |
squamous epithelium | 2.35e-07 | 25 |
blood vessel layer | 5.38e-07 | 7 |