FFCP PHASE1:Hg19::chr12:22852866..22852887,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:22852866..22852887,+ to FFCP PHASE1:Hg19::chr12:22852866..22852887,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536744_5end | |||
|cluster_id=chr12:22852866..22852887,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_1_at_ENST00000536744_5end | |||
|id=chr12:22852866..22852887,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.27e-21!5;CL:0001014!3.47e-10!2;CL:0001016!3.47e-10!2;CL:0000540!2.23e-07!6;CL:0000031!2.23e-07!6;CL:0000404!2.23e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.94e-19;2!CL:0001016;3.94e-19;2!CL:0000540;3.52e-14;6!CL:0000404;3.52e-14;6!CL:0000453;3.33e-08;5!CL:0000840;5.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.13e-19,2;CL:0001016,3.13e-19,2;CL:0000540,3.29e-14,6;CL:0000031,3.29e-14,6;CL:0000404,3.29e-14,6;CL:0000047,8.51e-11,8;CL:0000453,3.05e-08,5;CL:0000840,5.26e-07,5;CL:0001029,5.26e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;3.52e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.19e-10;1!DOID:1357;1.19e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.30e-10,1;DOID:1357,1.30e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.84e-10!2;UBERON:0000341!9.21e-10!2;UBERON:0003127!1.25e-09!2;UBERON:0000974!1.99e-07!10;UBERON:0001042!2.87e-07!10;UBERON:0009145!2.87e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.41e-20;2!UBERON:0005058;7.41e-20;2!UBERON:0009113;7.41e-20;2!UBERON:0000007;9.82e-20;2!UBERON:0001764;1.19e-10;1!UBERON:0001825;1.19e-10;1!UBERON:0003296;2.45e-10;4!UBERON:0010133;2.45e-10;4!UBERON:0004177;1.73e-08;5!UBERON:0005057;1.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.54e-20,2;UBERON:0001764,1.30e-10,1;UBERON:0001825,1.30e-10,1;UBERON:0002370,2.18e-10,4;UBERON:0005058,2.18e-10,4;UBERON:0009113,2.18e-10,4;UBERON:0003295,2.18e-10,4;UBERON:0005562,2.18e-10,4;UBERON:0003296,2.28e-10,4;UBERON:0010133,2.28e-10,4;UBERON:0000974,7.04e-09,10;UBERON:0001042,7.43e-09,10;UBERON:0009145,7.43e-09,10;UBERON:0006562,4.29e-08,11;UBERON:0003351,3.34e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.232387885739037,0.10366105501537,1.00928340350251,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,2.73280352390533,1.78801267576404,3.32352270423348,1.799791132412,4.6428117273477,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,4.24046059875633,0,0,0,0,0,0,0,0,0,0,0,0,8.11557760220621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85572483389305,22.9938813264811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,1.87151570769685,0,0,0,0,2.71733118420012,0,0,26.8080858926068,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,1.77377901416012,0.917899467677836,0.26721740526556,1.37842349302267,0,0,0,0,0,0.639701945702943,1.42838658878244,11.1738814016291,22.0365235750296,0,0,0,0,1.36893320434112,0.0673520530145875,1.36272190246085,0.332660356546013,0,0,0,0,0,0,0,0,3.8242020782295,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.232387885739037,0.10366105501537,1.00928340350251,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,2.73280352390533,1.78801267576404,3.32352270423348,1.799791132412,4.6428117273477,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,4.24046059875633,0,0,0,0,0,0,0,0,0,0,0,0,8.11557760220621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85572483389305,22.9938813264811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,1.87151570769685,0,0,0,0,2.71733118420012,0,0,26.8080858926068,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,1.77377901416012,0.917899467677836,0.26721740526556,1.37842349302267,0,0,0,0,0,0.639701945702943,1.42838658878244,11.1738814016291,22.0365235750296,0,0,0,0,1.36893320434112,0.0673520530145875,1.36272190246085,0.332660356546013,0,0,0,0,0,0,0,0,3.8242020782295,0 | ||
|short_description=p1@ENST00000536744 | |||
}} | }} |
Latest revision as of 07:36, 24 July 2015
Short description: | p1@ENST00000536744 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000536744_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000536744_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.13e-19 | 2 |
immature CD1a-positive Langerhans cell | 3.13e-19 | 2 |
neuron | 3.29e-14 | 6 |
neuroblast | 3.29e-14 | 6 |
electrically signaling cell | 3.29e-14 | 6 |
neuronal stem cell | 8.51e-11 | 8 |
Langerhans cell | 3.05e-08 | 5 |
immature conventional dendritic cell | 5.26e-07 | 5 |
common dendritic progenitor | 5.26e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.54e-20 | 2 |
maxillary sinus | 1.30e-10 | 1 |
paranasal sinus | 1.30e-10 | 1 |
thymus | 2.18e-10 | 4 |
hemolymphoid system gland | 2.18e-10 | 4 |
thymic region | 2.18e-10 | 4 |
pharyngeal gland | 2.18e-10 | 4 |
thymus primordium | 2.18e-10 | 4 |
gland of diencephalon | 2.28e-10 | 4 |
neuroendocrine gland | 2.28e-10 | 4 |
neck | 7.04e-09 | 10 |
chordate pharynx | 7.43e-09 | 10 |
pharyngeal region of foregut | 7.43e-09 | 10 |
pharynx | 4.29e-08 | 11 |
pharyngeal epithelium | 3.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.30e-10 | 1 |
maxillary sinus cancer | 1.30e-10 | 1 |