FFCP PHASE1:Hg19::chr12:31804978..31804996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:31804978..31804996,- | |||
|description=CAGE_peak_at_chr12:31804978..31804996,- | |description=CAGE_peak_at_chr12:31804978..31804996,- | ||
|id=chr12:31804978..31804996,- | |id=chr12:31804978..31804996,- | ||
|ontology_enrichment_celltype=CL:0002570!1.37e-07!8;CL:0002322!8.70e-07!5;CL:0002334!9.27e-07!12 | |ontology_enrichment_celltype=CL:0002570!1.37e-07!8;CL:0002322!8.70e-07!5;CL:0002334!9.27e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.46e-12;5!CL:0002321;2.94e-11;15!CL:0002570;6.74e-08;8!CL:0000333;7.16e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.13e-12,5;CL:0002570,7.47e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!2.94e-08!14;DOID:169!3.32e-07!6;DOID:3095!8.83e-07!22;DOID:2994!8.83e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.76e-11;14!DOID:169;8.93e-10;6!DOID:3095;1.72e-09;22!DOID:2994;1.72e-09;22!DOID:0060084;9.83e-09;3!DOID:127;9.83e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.34e-11,14;DOID:169,8.50e-10,6;DOID:3095,1.60e-09,22;DOID:2994,1.60e-09,22;DOID:0060084,6.46e-09,3;DOID:127,6.46e-09,3;DOID:0050687,4.30e-08,143;DOID:14566,9.28e-07,239;DOID:0060072,9.32e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001013!2.32e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.16e-08;5!UBERON:0002410;7.16e-08;5!UBERON:0001013;7.75e-08;14!UBERON:0002072;1.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.33e-08,5;UBERON:0002410,5.33e-08,5;UBERON:0001013,1.11e-07,14;UBERON:0002072,1.17e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,1.26343974685366,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.597794722207204,0.23486899728753,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0.37223371266318,1.35021065793013,1.55899208257918,0.252433774244115,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,1.09776335516636,1.72288698817931,2.67246068599892,1.45125477021519,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93907573636667,0,0.845302752556,1.59562869950922,0,0,0,0,0,0,2.46972101034231,0.977208552881205,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,1.04260337361699,0,0,0,0,0.213455115606889,0,0,0,0.744323423456331,0.460385919864187,1.12264037773229,0.128139149255701,1.53512174720011,0,0,1.69630663182921,1.77561725313127,2.29956036838666,0,1.74315567689939,0,0.601519410909855,0.276242966807689,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0,0.551346289938122,0.966782203814463,0.435050081742686,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.719489830333259,2.47083326762449,0.824686816419805,0,0,0,0,2.43713489631284,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0.655894752046633,0.811641507850816,0,0,1.72093622644862,1.57198465620994,0.7133421029625,0.709522128141196,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0.439524537815682,2.79129200023881,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,3.79217710565611,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.434589487688032,3.19001159731919,0.549585560411174,2.13213910407454,5.10966490978682,0,0,0,0,0,0,0,0,0,0,19.2585889370461,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,1.90915712168644,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,3.91102765469606,0,0,4.19600180122473,0.576361668616424,0.916292769327325,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,1.47641222272123,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.157363764404994,0,0,1.91915197319445,0,0,2.5426853765475,4.88699641578341,1.72844298240254,6.53174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0027595760908,1.22538230705385,1.63936315354902,4.71162288750703,0,0.122026264901963,0,0,0,0.0620964029413835,6.91743174681154,0,0,0,0,0,3.33318365804898,2.68658645196373,2.33713309847224,3.32883516901568,0,0,0,0,0,0,0.295710299979268,0,0,0.621051827505038,1.65882483136342,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.363697318405119,0,0,1.59238355479446,0,1.37358282073117,2.35724642136143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,2.30209868346573,1.72519698234691,0.157265941855896,1.41972529649618,0,0,0,1.67593475391973,0,0,0.80057074828547,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0.546974809018219,0,0,0,0,3.21421101526972,3.36283722218824,0,0.682986574053893,0.975726071789027,0,0,0,0,0,0,0.156986185701028,0,4.48435461302062,0,0,0,0.0714765441766563,5.68849002237816,4.64965701472501,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,2.7482065412268,0,0,0.102662806856247,1.1598144313382,0,0,3.58111395290463,2.14056163399623,0,1.53916723443601,0,0,0,6.58444214906132,0.735444965261716,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,1.48798007266701,0.462175628631418,0.865253124247578,0,2.18531143927391,4.81454303843461,3.3656313814854,0,1.65410819162721,11.7832543467416,1.21245917149183,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0.733448665097199,0,0,0,0 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|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,1.26343974685366,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.597794722207204,0.23486899728753,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0.37223371266318,1.35021065793013,1.55899208257918,0.252433774244115,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,1.09776335516636,1.72288698817931,2.67246068599892,1.45125477021519,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93907573636667,0,0.845302752556,1.59562869950922,0,0,0,0,0,0,2.46972101034231,0.977208552881205,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,1.04260337361699,0,0,0,0,0.213455115606889,0,0,0,0.744323423456331,0.460385919864187,1.12264037773229,0.128139149255701,1.53512174720011,0,0,1.69630663182921,1.77561725313127,2.29956036838666,0,1.74315567689939,0,0.601519410909855,0.276242966807689,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0,0.551346289938122,0.966782203814463,0.435050081742686,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.719489830333259,2.47083326762449,0.824686816419805,0,0,0,0,2.43713489631284,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0.655894752046633,0.811641507850816,0,0,1.72093622644862,1.57198465620994,0.7133421029625,0.709522128141196,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0.439524537815682,2.79129200023881,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,3.79217710565611,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.434589487688032,3.19001159731919,0.549585560411174,2.13213910407454,5.10966490978682,0,0,0,0,0,0,0,0,0,0,19.2585889370461,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,1.90915712168644,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,3.91102765469606,0,0,4.19600180122473,0.576361668616424,0.916292769327325,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,1.47641222272123,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.157363764404994,0,0,1.91915197319445,0,0,2.5426853765475,4.88699641578341,1.72844298240254,6.53174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0027595760908,1.22538230705385,1.63936315354902,4.71162288750703,0,0.122026264901963,0,0,0,0.0620964029413835,6.91743174681154,0,0,0,0,0,3.33318365804898,2.68658645196373,2.33713309847224,3.32883516901568,0,0,0,0,0,0,0.295710299979268,0,0,0.621051827505038,1.65882483136342,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.363697318405119,0,0,1.59238355479446,0,1.37358282073117,2.35724642136143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,2.30209868346573,1.72519698234691,0.157265941855896,1.41972529649618,0,0,0,1.67593475391973,0,0,0.80057074828547,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0.546974809018219,0,0,0,0,3.21421101526972,3.36283722218824,0,0.682986574053893,0.975726071789027,0,0,0,0,0,0,0.156986185701028,0,4.48435461302062,0,0,0,0.0714765441766563,5.68849002237816,4.64965701472501,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,2.7482065412268,0,0,0.102662806856247,1.1598144313382,0,0,3.58111395290463,2.14056163399623,0,1.53916723443601,0,0,0,6.58444214906132,0.735444965261716,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,1.48798007266701,0.462175628631418,0.865253124247578,0,2.18531143927391,4.81454303843461,3.3656313814854,0,1.65410819162721,11.7832543467416,1.21245917149183,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0.733448665097199,0,0,0,0 | ||
|short_description=p@chr12:31804978..31804996,- | |short_description=p@chr12:31804978..31804996,- | ||
}} | }} |
Latest revision as of 08:07, 24 July 2015
Short description: | p@chr12:31804978..31804996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31804978..31804996, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.13e-12 | 5 |
mesenchymal stem cell of adipose | 7.47e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.33e-08 | 5 |
autonomic nervous system | 5.33e-08 | 5 |
adipose tissue | 1.11e-07 | 14 |
hypodermis | 1.17e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.34e-11 | 14 |
neuroendocrine tumor | 8.50e-10 | 6 |
germ cell and embryonal cancer | 1.60e-09 | 22 |
germ cell cancer | 1.60e-09 | 22 |
cell type benign neoplasm | 6.46e-09 | 3 |
leiomyoma | 6.46e-09 | 3 |
cell type cancer | 4.30e-08 | 143 |
disease of cellular proliferation | 9.28e-07 | 239 |
benign neoplasm | 9.32e-07 | 4 |