FFCP PHASE1:Hg19::chr12:40623784..40623788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:40623784..40623788,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr12:40623784..40623788,+ | |description=CAGE_peak_at_chr12:40623784..40623788,+ | ||
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|ontology_enrichment_celltype=CL:0000766!1.44e-20!76;CL:0000738!1.48e-16!140;CL:0002009!1.94e-16!65;CL:0002194!4.52e-16!63;CL:0000576!4.52e-16!63;CL:0000040!4.52e-16!63;CL:0000559!4.52e-16!63;CL:0000557!5.21e-16!71;CL:0002057!7.95e-16!42;CL:0000860!2.96e-15!45;CL:0000839!2.99e-15!70;CL:0000763!1.97e-13!112;CL:0000049!1.97e-13!112;CL:0002087!3.20e-12!119;CL:0002032!5.44e-12!165;CL:0000837!5.44e-12!165;CL:0002031!1.08e-11!124;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000988!1.57e-10!182 | |ontology_enrichment_celltype=CL:0000766!1.44e-20!76;CL:0000738!1.48e-16!140;CL:0002009!1.94e-16!65;CL:0002194!4.52e-16!63;CL:0000576!4.52e-16!63;CL:0000040!4.52e-16!63;CL:0000559!4.52e-16!63;CL:0000557!5.21e-16!71;CL:0002057!7.95e-16!42;CL:0000860!2.96e-15!45;CL:0000839!2.99e-15!70;CL:0000763!1.97e-13!112;CL:0000049!1.97e-13!112;CL:0002087!3.20e-12!119;CL:0002032!5.44e-12!165;CL:0000837!5.44e-12!165;CL:0002031!1.08e-11!124;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000988!1.57e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.54e-19;3!CL:0000094;6.71e-19;8!CL:0000860;6.10e-18;33!CL:0002057;6.10e-18;33!CL:0000081;1.08e-13;11!CL:0000771;8.52e-13;2!CL:0000576;1.93e-12;48!CL:0000473;2.27e-12;39!CL:0000234;2.27e-12;39!CL:0000766;1.92e-07;69!CL:0000511;5.18e-07;1!CL:0002625;5.18e-07;1!CL:0000216;5.18e-07;1 | |ontology_enrichment_celltype_v019=CL:0000775;2.54e-19;3!CL:0000094;6.71e-19;8!CL:0000860;6.10e-18;33!CL:0002057;6.10e-18;33!CL:0000081;1.08e-13;11!CL:0000771;8.52e-13;2!CL:0000576;1.93e-12;48!CL:0000473;2.27e-12;39!CL:0000234;2.27e-12;39!CL:0000766;1.92e-07;69!CL:0000511;5.18e-07;1!CL:0002625;5.18e-07;1!CL:0000216;5.18e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.22e-22,72;CL:0000860,2.97e-21,42;CL:0002057,2.97e-21,42;CL:0000775,3.25e-19,3;CL:0000094,7.51e-19,8;CL:0000473,2.85e-18,48;CL:0000234,2.85e-18,48;CL:0002194,4.24e-14,59;CL:0000576,4.24e-14,59;CL:0000040,4.24e-14,59;CL:0000559,4.24e-14,59;CL:0000763,6.62e-14,108;CL:0000049,6.62e-14,108;CL:0000081,1.18e-13,11;CL:0002009,1.46e-13,61;CL:0000738,4.26e-13,136;CL:0000771,8.03e-13,2;CL:0000839,2.34e-12,66;CL:0000557,3.88e-12,67;CL:0002032,1.96e-10,161;CL:0000837,1.96e-10,161;CL:0000037,7.87e-10,168;CL:0000988,3.99e-09,177;CL:0002087,2.38e-08,115;CL:0002031,6.97e-08,120;CL:0000511,4.34e-07,1;CL:0002625,4.34e-07,1;CL:0000216,4.34e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-16;42 | |ontology_enrichment_development_v019=CL:0002057;4.69e-16;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-20!102;UBERON:0003061!1.19e-20!102;UBERON:0002193!4.35e-20!112;UBERON:0007023!3.89e-13!115;UBERON:0002371!6.44e-13!80;UBERON:0001474!3.01e-11!86;UBERON:0002405!1.32e-10!115;UBERON:0000178!2.66e-10!15;UBERON:0000179!2.66e-10!15;UBERON:0000463!2.66e-10!15;UBERON:0004765!3.19e-09!101;UBERON:0001434!3.19e-09!101;UBERON:0002020!9.40e-07!34;UBERON:0003528!9.40e-07!34 | |ontology_enrichment_uberon=UBERON:0002390!1.19e-20!102;UBERON:0003061!1.19e-20!102;UBERON:0002193!4.35e-20!112;UBERON:0007023!3.89e-13!115;UBERON:0002371!6.44e-13!80;UBERON:0001474!3.01e-11!86;UBERON:0002405!1.32e-10!115;UBERON:0000178!2.66e-10!15;UBERON:0000179!2.66e-10!15;UBERON:0000463!2.66e-10!15;UBERON:0004765!3.19e-09!101;UBERON:0001434!3.19e-09!101;UBERON:0002020!9.40e-07!34;UBERON:0003528!9.40e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.26e-24;15!UBERON:0000179;2.26e-24;15!UBERON:0000463;2.26e-24;15!UBERON:0002390;4.82e-10;32!UBERON:0002171;1.12e-07;1!UBERON:0006518;1.12e-07;1!UBERON:0008949;1.12e-07;1!UBERON:0000101;1.12e-07;1!UBERON:0002167;1.12e-07;1!UBERON:0001136;5.18e-07;1!UBERON:0001343;5.18e-07;1!UBERON:0004910;5.18e-07;1!UBERON:0004813;5.18e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.26e-24;15!UBERON:0000179;2.26e-24;15!UBERON:0000463;2.26e-24;15!UBERON:0002390;4.82e-10;32!UBERON:0002171;1.12e-07;1!UBERON:0006518;1.12e-07;1!UBERON:0008949;1.12e-07;1!UBERON:0000101;1.12e-07;1!UBERON:0002167;1.12e-07;1!UBERON:0001136;5.18e-07;1!UBERON:0001343;5.18e-07;1!UBERON:0004910;5.18e-07;1!UBERON:0004813;5.18e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.06e-24,15;UBERON:0000179,2.06e-24,15;UBERON:0000463,2.06e-24,15;UBERON:0002390,4.45e-22,98;UBERON:0003061,4.45e-22,98;UBERON:0002193,1.20e-19,108;UBERON:0002371,2.02e-10,76;UBERON:0003081,1.68e-09,203;UBERON:0001474,1.75e-09,82;UBERON:0004765,1.98e-08,90;UBERON:0002405,4.41e-08,93;UBERON:0002171,1.12e-07,1;UBERON:0006518,1.12e-07,1;UBERON:0008949,1.12e-07,1;UBERON:0000101,1.12e-07,1;UBERON:0002167,1.12e-07,1;UBERON:0001434,2.38e-07,100;UBERON:0001136,4.34e-07,1;UBERON:0001343,4.34e-07,1;UBERON:0004910,4.34e-07,1;UBERON:0005154,4.34e-07,1;UBERON:0005295,4.34e-07,1;UBERON:0004813,4.34e-07,1;UBERON:0005297,4.34e-07,1;UBERON:0005294,4.34e-07,1;UBERON:0010141,4.34e-07,1;UBERON:0005891,4.34e-07,1 | |||
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| ||
|short_description=p@chr12:40623784..40623788,+ | |short_description=p@chr12:40623784..40623788,+ | ||
}} | }} |
Latest revision as of 08:22, 24 July 2015
Short description: | p@chr12:40623784..40623788, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:40623784..40623788, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.22e-22 | 72 |
classical monocyte | 2.97e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-21 | 42 |
neutrophil | 3.25e-19 | 3 |
granulocyte | 7.51e-19 | 8 |
defensive cell | 2.85e-18 | 48 |
phagocyte | 2.85e-18 | 48 |
monopoietic cell | 4.24e-14 | 59 |
monocyte | 4.24e-14 | 59 |
monoblast | 4.24e-14 | 59 |
promonocyte | 4.24e-14 | 59 |
myeloid cell | 6.62e-14 | 108 |
common myeloid progenitor | 6.62e-14 | 108 |
blood cell | 1.18e-13 | 11 |
macrophage dendritic cell progenitor | 1.46e-13 | 61 |
leukocyte | 4.26e-13 | 136 |
eosinophil | 8.03e-13 | 2 |
myeloid lineage restricted progenitor cell | 2.34e-12 | 66 |
granulocyte monocyte progenitor cell | 3.88e-12 | 67 |
hematopoietic oligopotent progenitor cell | 1.96e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-10 | 161 |
hematopoietic stem cell | 7.87e-10 | 168 |
hematopoietic cell | 3.99e-09 | 177 |
nongranular leukocyte | 2.38e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 6.97e-08 | 120 |
androgen binding protein secreting cell | 4.34e-07 | 1 |
seminiferous tubule epithelial cell | 4.34e-07 | 1 |
Sertoli cell | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.06e-24 | 15 |
haemolymphatic fluid | 2.06e-24 | 15 |
organism substance | 2.06e-24 | 15 |
hematopoietic system | 4.45e-22 | 98 |
blood island | 4.45e-22 | 98 |
hemolymphoid system | 1.20e-19 | 108 |
bone marrow | 2.02e-10 | 76 |
lateral plate mesoderm | 1.68e-09 | 203 |
bone element | 1.75e-09 | 82 |
skeletal element | 1.98e-08 | 90 |
immune system | 4.41e-08 | 93 |
lower lobe of right lung | 1.12e-07 | 1 |
right lung lobe | 1.12e-07 | 1 |
lower lobe of lung | 1.12e-07 | 1 |
lobe of lung | 1.12e-07 | 1 |
right lung | 1.12e-07 | 1 |
skeletal system | 2.38e-07 | 100 |
mesothelium | 4.34e-07 | 1 |
seminiferous tubule of testis | 4.34e-07 | 1 |
epithelium of male gonad | 4.34e-07 | 1 |
epithelial cord | 4.34e-07 | 1 |
sex cord | 4.34e-07 | 1 |
seminiferous tubule epithelium | 4.34e-07 | 1 |
testis sex cord | 4.34e-07 | 1 |
genital ridge | 4.34e-07 | 1 |
primitive sex cord of indifferent gonad | 4.34e-07 | 1 |
coelomic epithelium | 4.34e-07 | 1 |