FFCP PHASE1:Hg19::chr12:52473502..52473510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000546390,uc009zme.1_5end | |association_with_transcript=22bp_to_ENST00000546390,uc009zme.1_5end | ||
|cluster_id=chr12:52473502..52473510,+ | |||
|description=CAGE_peak_2_at_ENST00000546390_5end,CAGE_peak_2_at_uc009zme.1_5end | |description=CAGE_peak_2_at_ENST00000546390_5end,CAGE_peak_2_at_uc009zme.1_5end | ||
|id=chr12:52473502..52473510,+ | |id=chr12:52473502..52473510,+ | ||
|ontology_enrichment_celltype=CL:0002504!6.81e-17!3;CL:1000279!6.81e-17!3;CL:1000280!6.81e-17!3;CL:1000487!2.32e-11!2;CL:0002622!2.96e-08!3;CL:0000784!8.63e-08!3 | |ontology_enrichment_celltype=CL:0002504!6.81e-17!3;CL:1000279!6.81e-17!3;CL:1000280!6.81e-17!3;CL:1000487!2.32e-11!2;CL:0002622!2.96e-08!3;CL:0000784!8.63e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;1.92e-66;3!CL:1000279;1.92e-66;3!CL:1000280;1.92e-66;3!CL:0002622;3.59e-30;3!CL:0000214;1.17e-08;3!CL:0000499;9.99e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,4.71e-66,3;CL:1000279,4.71e-66,3;CL:1000280,4.71e-66,3;CL:0002622,1.47e-30,3;CL:0000214,1.51e-08,3;CL:0000499,9.43e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.17e-08;3!UBERON:0003353;1.17e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!1.83e-14!9;UBERON:0000162!5.17e-13!14;UBERON:0001353!5.17e-13!14;UBERON:0000163!5.17e-13!14;UBERON:0006866!5.17e-13!14;UBERON:0000164!5.17e-13!14;UBERON:0000931!5.17e-13!14;UBERON:0004921!1.20e-12!129;UBERON:0004185!1.20e-12!129;UBERON:0001046!1.29e-12!19;UBERON:0004122!4.20e-12!15;UBERON:0002367!5.67e-12!11;UBERON:0010147!5.67e-12!11;UBERON:0009846!5.67e-12!11;UBERON:0003353!5.67e-12!11;UBERON:0004902!5.67e-12!11;UBERON:0003820!5.67e-12!11;UBERON:0009847!5.67e-12!11;UBERON:0000059!8.73e-12!11;UBERON:0007023!1.69e-11!115;UBERON:0003937!5.98e-11!12;UBERON:0005399!5.98e-11!12;UBERON:0001007!6.26e-11!155;UBERON:0001555!6.26e-11!155;UBERON:0007026!6.26e-11!155;UBERON:0003101!6.41e-11!22;UBERON:0000079!6.41e-11!22;UBERON:0004119!1.24e-09!169;UBERON:0000925!1.24e-09!169;UBERON:0006595!1.24e-09!169;UBERON:0005153!6.54e-08!37;UBERON:0005409!6.89e-08!35;UBERON:0000077!1.37e-07!130;UBERON:0002106!1.48e-07!3;UBERON:0004854!1.48e-07!3;UBERON:0009034!1.48e-07!3;UBERON:0002095!1.48e-07!3;UBERON:0004782!1.48e-07!3;UBERON:0003281!1.48e-07!3;UBERON:0009664!1.48e-07!3;UBERON:0002296!1.48e-07!3;UBERON:0005602!1.48e-07!3;UBERON:0001179!1.48e-07!3;UBERON:0006293!1.48e-07!3;UBERON:0003104!5.26e-07!238;UBERON:0009142!5.26e-07!238;UBERON:0005157!8.63e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;9.34e-23;9!UBERON:0000059;9.20e-19;11!UBERON:0002367;1.21e-18;11!UBERON:0010147;1.21e-18;11!UBERON:0003937;3.73e-17;12!UBERON:0005399;3.73e-17;12!UBERON:0003101;2.16e-16;22!UBERON:0000079;2.16e-16;22!UBERON:0001135;5.89e-14;15!UBERON:0000160;9.58e-12;17!UBERON:0005409;2.48e-09;22!UBERON:0006915;1.17e-08;3!UBERON:0007616;1.17e-08;3!UBERON:0002217;1.17e-08;3!UBERON:0002018;1.17e-08;3!UBERON:0000077;5.43e-08;27!UBERON:0002385;6.04e-07;31!UBERON:0001015;6.04e-07;31!UBERON:0000383;6.04e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.26e-22,9;UBERON:0002367,7.68e-19,11;UBERON:0010147,7.68e-19,11;UBERON:0009846,7.68e-19,11;UBERON:0003353,7.68e-19,11;UBERON:0004902,7.68e-19,11;UBERON:0003820,7.68e-19,11;UBERON:0009847,7.68e-19,11;UBERON:0000059,1.17e-18,11;UBERON:0003937,2.46e-17,12;UBERON:0005399,2.46e-17,12;UBERON:0003101,1.57e-16,22;UBERON:0000079,1.57e-16,22;UBERON:0000162,5.79e-15,14;UBERON:0001353,5.79e-15,14;UBERON:0000163,5.79e-15,14;UBERON:0006866,5.79e-15,14;UBERON:0000164,5.79e-15,14;UBERON:0000931,5.79e-15,14;UBERON:0004122,5.16e-14,15;UBERON:0001135,7.03e-14,15;UBERON:0000160,1.11e-11,17;UBERON:0001046,3.31e-11,19;UBERON:0005153,5.47e-10,37;UBERON:0004921,5.76e-09,118;UBERON:0006915,1.51e-08,3;UBERON:0007616,1.51e-08,3;UBERON:0002217,1.51e-08,3;UBERON:0002018,1.51e-08,3;UBERON:0005409,2.79e-08,25;UBERON:0005157,6.16e-08,47;UBERON:0003064,8.40e-08,28;UBERON:0000077,1.49e-07,29;UBERON:0001007,2.90e-07,145;UBERON:0001555,2.90e-07,145;UBERON:0007026,2.90e-07,145 | |||
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|short_description=p2@ENST00000546390,p2@uc009zme.1 | |short_description=p2@ENST00000546390,p2@uc009zme.1 | ||
}} | }} |
Latest revision as of 09:28, 24 July 2015
Short description: | p2@ENST00000546390, p2@uc009zme.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000546390_5end, CAGE_peak_2_at_uc009zme.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000546390, uc009zme.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 4.71e-66 | 3 |
smooth muscle cell of large intestine | 4.71e-66 | 3 |
smooth muscle cell of colon | 4.71e-66 | 3 |
prostate stromal cell | 1.47e-30 | 3 |
synovial cell | 1.51e-08 | 3 |
stromal cell | 9.43e-08 | 28 |