FFCP PHASE1:Hg19::chr12:52698999..52699008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52698999..52699008,+ | |||
|description=CAGE_peak_at_chr12:52698999..52699008,+ | |description=CAGE_peak_at_chr12:52698999..52699008,+ | ||
|id=chr12:52698999..52699008,+ | |id=chr12:52698999..52699008,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.54e-10!3;CL:1000615!2.54e-10!3;CL:0002306!2.54e-10!3;CL:0002195!5.59e-07!2;CL:0002571!5.59e-07!2 | |ontology_enrichment_celltype=CL:0000239!2.54e-10!3;CL:1000615!2.54e-10!3;CL:0002306!2.54e-10!3;CL:0002195!5.59e-07!2;CL:0002571!5.59e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.88e-50;1!CL:0000911;1.88e-50;1!CL:0002379;1.88e-50;1!CL:0000814;1.88e-50;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.46e-50,1;CL:0000914,1.46e-50,1;CL:0000911,1.46e-50,1;CL:0000814,1.46e-50,1;CL:0002042,1.46e-50,1;CL:0002039,1.46e-50,1;CL:0002040,1.46e-50,1;CL:0002041,1.46e-50,1;CL:0002379,2.42e-50,1;CL:0000893,4.32e-26,2;CL:0002489,4.32e-26,2;CL:0000809,4.32e-26,2;CL:0000808,4.32e-26,2;CL:0000894,4.32e-26,2;CL:0000806,4.32e-26,2;CL:0000807,4.32e-26,2;CL:0000805,4.32e-26,2;CL:0002425,4.32e-26,2 | |||
|ontology_enrichment_development_v019=CL:0002425;4.90e-26;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.88e-50;1!DOID:3565;1.88e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.42e-50,1;DOID:3565,2.42e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0006853!2.54e-10!3;UBERON:0007685!2.54e-10!3;UBERON:0004134!2.54e-10!3 | |ontology_enrichment_uberon=UBERON:0006853!2.54e-10!3;UBERON:0007685!2.54e-10!3;UBERON:0004134!2.54e-10!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.82e-14,4;UBERON:0005058,8.82e-14,4;UBERON:0009113,8.82e-14,4;UBERON:0003295,8.82e-14,4;UBERON:0005562,8.82e-14,4;UBERON:0003351,1.22e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31550323682941,0.552700035571697,0.869409257205157,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,2.4658731678576,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,1.03051603426729,0,0,0,0.976940477010201,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0.548167698587004,0,0,0,0.240476460754601,0,0.19980960958213,0,0,0,0.288109595976299,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.906496732161005,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0.827356886187777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:52698999..52699008,+ | |short_description=p@chr12:52698999..52699008,+ | ||
}} | }} |
Latest revision as of 09:31, 24 July 2015
Short description: | p@chr12:52698999..52699008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52698999..52699008, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.46e-50 | 1 |
immature NK T cell | 1.46e-50 | 1 |
effector T cell | 1.46e-50 | 1 |
mature NK T cell | 1.46e-50 | 1 |
immature NK T cell stage IV | 1.46e-50 | 1 |
immature NK T cell stage I | 1.46e-50 | 1 |
immature NK T cell stage II | 1.46e-50 | 1 |
immature NK T cell stage III | 1.46e-50 | 1 |
meningothelial cell | 2.42e-50 | 1 |
thymocyte | 4.32e-26 | 2 |
double negative thymocyte | 4.32e-26 | 2 |
double-positive, alpha-beta thymocyte | 4.32e-26 | 2 |
DN4 thymocyte | 4.32e-26 | 2 |
DN1 thymic pro-T cell | 4.32e-26 | 2 |
DN2 thymocyte | 4.32e-26 | 2 |
DN3 thymocyte | 4.32e-26 | 2 |
immature single positive thymocyte | 4.32e-26 | 2 |
early T lineage precursor | 4.32e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.82e-14 | 4 |
hemolymphoid system gland | 8.82e-14 | 4 |
thymic region | 8.82e-14 | 4 |
pharyngeal gland | 8.82e-14 | 4 |
thymus primordium | 8.82e-14 | 4 |
pharyngeal epithelium | 1.22e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.42e-50 | 1 |
meningioma | 2.42e-50 | 1 |