FFCP PHASE1:Hg19::chr12:8869049..8869056,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:8869049..8869056,+ to FFCP PHASE1:Hg19::chr12:8869049..8869056,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:8869049..8869056,+ | |||
|description=CAGE_peak_at_chr12:8869049..8869056,+ | |||
|id=chr12:8869049..8869056,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;4.71e-15;1!CL:0002032;1.31e-14;1!CL:0000557;1.31e-14;1!CL:0000039;1.59e-08;7!CL:0000586;1.59e-08;7!CL:0000159;3.56e-08;2!CL:1000415;5.94e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.73e-15,1;CL:0000039,1.65e-08,7;CL:0000586,1.65e-08,7;CL:0000159,3.56e-08,2;CL:1000415,7.52e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.13e-12;10!UBERON:0005564;1.13e-12;10 | |||
|ontology_enrichment_disease=DOID:0050687!2.60e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.71e-15;1!DOID:4074;5.94e-08;2!DOID:4905;5.94e-08;2!DOID:3498;5.94e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.73e-15,1;DOID:4074,7.03e-08,2;DOID:4905,7.03e-08,2;DOID:3498,7.03e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.71e-15;1!UBERON:0002171;1.31e-14;1!UBERON:0006518;1.31e-14;1!UBERON:0008949;1.31e-14;1!UBERON:0000101;1.31e-14;1!UBERON:0002167;1.31e-14;1!UBERON:0000922;2.86e-10;49!UBERON:0002323;2.17e-09;45!UBERON:0004909;3.56e-08;2!UBERON:0000473;1.44e-07;8!UBERON:0002075;3.28e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.73e-15,1;UBERON:0002171,1.23e-14,1;UBERON:0006518,1.23e-14,1;UBERON:0008949,1.23e-14,1;UBERON:0000101,1.23e-14,1;UBERON:0002167,1.23e-14,1;UBERON:0002323,4.52e-10,46;UBERON:0004458,1.96e-09,49;UBERON:0003886,1.57e-08,54;UBERON:0004909,3.56e-08,2;UBERON:0000473,1.49e-07,8;UBERON:0002553,1.64e-07,61;UBERON:0002075,3.86e-07,18 | |||
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| |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.723033089650446,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0.192190067365106,0.765676274967505,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0.422250816255987,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0.697118721393016,0.0769502585037971,0,0.46112780877612,0.0897576444097721,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0,0,0,0.265372693510018,0,0.593042257361244,0.123563938946503,0,0,0,0.234264445725339,0.547364367646998,1.17398771359254,0,0,1.20990716048664,0.61214552326098,0.126373159256976,0,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0.0870592065804026,0.698906672968121,0,0.677294319023596,0.292357268344742,0.739039113478883,0,0,0,0,0,0,1.17330829640882,0,0,0,0,0.114536596165916,0,0.14405479798815,0,1.64985824231757,0,0.104602846312333,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0.429226048136571,0,0.335917362433631,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.121499113316049,0,0.157611414598396,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0.342173675768659,0,0.106787412567695,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.250381861413,1.72022758707021,0,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.643324774124777,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0.169732529954025,0.212574920101683,0.867550349813015,0,0.318004350653419,0.315446980005013,0,0,0,0.192687675289379,0,0.159633859057151,0.615349092722265,1.00828678488687,0,0.645902582527404,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.455324382702595,0.532214220975833,0,0,0,0.0657727735628491,0,0,0,0.628462359664008,0,0,0,0.47775168788705,0.0714765441766563,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,2.46081949955143,0,0.243835849964539,0.647428837187895,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0.356760272332706,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0.187967835959707,0.0644578879735772,0,1.07132363163395,0,0.0802413666891683,0,0,0.2866791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| ||
|short_description=p@chr12:8869049..8869056,+ | |||
}} | }} |
Latest revision as of 13:11, 24 July 2015
Short description: | p@chr12:8869049..8869056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8869049..8869056, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.73e-15 | 1 |
germ line cell | 1.65e-08 | 7 |
germ cell | 1.65e-08 | 7 |
seromucus secreting cell | 3.56e-08 | 2 |
epithelial cell of gall bladder | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 4.73e-15 | 1 |
lower lobe of right lung | 1.23e-14 | 1 |
right lung lobe | 1.23e-14 | 1 |
lower lobe of lung | 1.23e-14 | 1 |
lobe of lung | 1.23e-14 | 1 |
right lung | 1.23e-14 | 1 |
body cavity | 4.52e-10 | 46 |
body cavity or lining | 1.96e-09 | 49 |
body cavity precursor | 1.57e-08 | 54 |
epithelium of gonad | 3.56e-08 | 2 |
testis | 1.49e-07 | 8 |
anatomical cavity | 1.64e-07 | 61 |
viscus | 3.86e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.73e-15 | 1 |
pancreas adenocarcinoma | 7.03e-08 | 2 |
pancreatic carcinoma | 7.03e-08 | 2 |
pancreatic ductal adenocarcinoma | 7.03e-08 | 2 |