FFCP PHASE1:Hg19::chr13:43636307..43636322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:43636307..43636322,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr13:43636307..43636322,+ | |||
|id=chr13:43636307..43636322,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.46e-11!3;CL:0002577!1.46e-11!3;CL:0002541!2.21e-11!3;CL:0000066!2.07e-08!254;CL:0002536!3.31e-08!2;CL:0002537!3.44e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.36e-52;19!CL:0002577;5.44e-31;3!CL:0002536;4.25e-21;2!CL:0002537;3.05e-19;5!CL:0002541;1.32e-14;3!CL:0002379;4.91e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.36e-52,19;CL:0002577,5.44e-31,3;CL:0002536,4.25e-21,2;CL:0002537,3.05e-19,5;CL:0002541,1.32e-14,3;CL:0002379,4.44e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.78e-08!106;DOID:114!2.09e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3620;4.91e-11;1!DOID:3565;4.91e-11;1!DOID:170;1.45e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.44e-11,1;DOID:3565,4.44e-11,1;DOID:170,1.47e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.40e-34!14;UBERON:0000158!1.40e-34!14;UBERON:0000478!1.11e-29!24;UBERON:0003124!2.84e-24!7;UBERON:0004923!7.54e-15!57;UBERON:0001987!1.24e-14!4;UBERON:0004340!1.24e-14!4;UBERON:0000305!6.35e-13!7;UBERON:0000476!2.21e-11!3;UBERON:0000920!2.21e-11!3;UBERON:0004871!2.98e-11!8;UBERON:0002075!5.81e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.68e-49;24!UBERON:0005631;3.31e-49;10!UBERON:0000158;3.31e-49;10!UBERON:0000305;2.30e-36;7!UBERON:0001987;2.01e-23;4!UBERON:0003124;1.32e-14;3!UBERON:0000920;1.32e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.38e-71,14;UBERON:0000158,5.38e-71,14;UBERON:0000478,2.81e-49,24;UBERON:0000305,2.30e-36,7;UBERON:0003124,3.81e-36,7;UBERON:0004871,7.92e-32,8;UBERON:0001987,2.01e-23,4;UBERON:0004340,2.01e-23,4;UBERON:0000920,1.32e-14,3;UBERON:0004923,5.29e-14,66 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.89791704751465,12.3970479767373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23852898652861,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,11.5188477149579,9.98612637062982,19.0505884797699,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,185.504464641185,32.3691502107576,153.580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8321484456857,0.824378340616761,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,1.18608451472249,0.247127877893006,0.730953646538188,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0.664653872707185,0,0.627865836814451,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0.19980960958213,1.72908500584927,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04501643855337,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,1.09726132484042,0.647428837187895,0,0,0,0,0,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46162355158329,0.61193297845189,0,2.02168778976659,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,6.10811374324791,0,0,0,0,0,0 | ||
|short_description=p@chr13:43636307..43636322,+ | |||
}} | }} |
Latest revision as of 16:08, 24 July 2015
Short description: | p@chr13:43636307..43636322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43636307..43636322, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.36e-52 | 19 |
placental epithelial cell | 5.44e-31 | 3 |
amniotic epithelial cell | 4.25e-21 | 2 |
amnion mesenchymal stem cell | 3.05e-19 | 5 |
chorionic membrane mesenchymal stem cell | 1.32e-14 | 3 |
meningothelial cell | 4.44e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.38e-71 | 14 |
membranous layer | 5.38e-71 | 14 |
extraembryonic structure | 2.81e-49 | 24 |
amnion | 2.30e-36 | 7 |
chorion | 3.81e-36 | 7 |
somatic layer of lateral plate mesoderm | 7.92e-32 | 8 |
placenta | 2.01e-23 | 4 |
allantois | 2.01e-23 | 4 |
egg chorion | 1.32e-14 | 3 |
organ component layer | 5.29e-14 | 66 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.44e-11 | 1 |
meningioma | 4.44e-11 | 1 |
endocrine gland cancer | 1.47e-07 | 6 |