FFCP PHASE1:Hg19::chr13:49070828..49070853,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:49070828..49070853,- | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_at_chr13:49070828..49070853,- | |description=CAGE_peak_at_chr13:49070828..49070853,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!1.72e-14!25;CL:0000827!1.72e-14!25;CL:0000838!4.74e-14!52;CL:0000542!1.01e-13!53;CL:0000051!1.01e-13!53;CL:0000623!1.18e-12!3;CL:0000825!1.18e-12!3;CL:0000791!5.15e-10!18;CL:0000789!5.15e-10!18;CL:0002420!5.15e-10!18;CL:0002419!5.15e-10!18;CL:0000790!5.15e-10!18;CL:0000893!1.60e-09!2;CL:0002489!1.60e-09!2;CL:0000809!1.60e-09!2;CL:0000808!1.60e-09!2;CL:0000894!1.60e-09!2;CL:0000806!1.60e-09!2;CL:0000807!1.60e-09!2;CL:0000805!1.60e-09!2;CL:0002425!1.60e-09!2 | |ontology_enrichment_celltype=CL:0000084!1.72e-14!25;CL:0000827!1.72e-14!25;CL:0000838!4.74e-14!52;CL:0000542!1.01e-13!53;CL:0000051!1.01e-13!53;CL:0000623!1.18e-12!3;CL:0000825!1.18e-12!3;CL:0000791!5.15e-10!18;CL:0000789!5.15e-10!18;CL:0002420!5.15e-10!18;CL:0002419!5.15e-10!18;CL:0000790!5.15e-10!18;CL:0000893!1.60e-09!2;CL:0002489!1.60e-09!2;CL:0000809!1.60e-09!2;CL:0000808!1.60e-09!2;CL:0000894!1.60e-09!2;CL:0000806!1.60e-09!2;CL:0000807!1.60e-09!2;CL:0000805!1.60e-09!2;CL:0002425!1.60e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.16e-18;1!CL:0000911;3.16e-18;1!CL:0000814;3.16e-18;1!CL:0000084;5.27e-11;25 | |ontology_enrichment_celltype_v019=CL:0002127;3.16e-18;1!CL:0000911;3.16e-18;1!CL:0000814;3.16e-18;1!CL:0000084;5.27e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.16e-18,1;CL:0000914,3.16e-18,1;CL:0000911,3.16e-18,1;CL:0000814,3.16e-18,1;CL:0002042,3.16e-18,1;CL:0002039,3.16e-18,1;CL:0002040,3.16e-18,1;CL:0002041,3.16e-18,1;CL:0000084,5.48e-11,25;CL:0000827,5.48e-11,25;CL:0000893,8.69e-10,2;CL:0002489,8.69e-10,2;CL:0000809,8.69e-10,2;CL:0000808,8.69e-10,2;CL:0000894,8.69e-10,2;CL:0000806,8.69e-10,2;CL:0000807,8.69e-10,2;CL:0000805,8.69e-10,2;CL:0002425,8.69e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002425;8.69e-10;2 | |ontology_enrichment_development_v019=CL:0002425;8.69e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;1.46e-08;39!DOID:2531;2.93e-07;51!DOID:0060083;2.93e-07;51 | |ontology_enrichment_disease_v019=DOID:1240;1.46e-08;39!DOID:2531;2.93e-07;51!DOID:0060083;2.93e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,9.63e-11,39;DOID:2531,3.24e-08,51;DOID:0060083,3.24e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!9.37e-17!4;UBERON:0005058!9.37e-17!4;UBERON:0009113!9.37e-17!4;UBERON:0003295!9.37e-17!4;UBERON:0005562!9.37e-17!4;UBERON:0004177!3.27e-14!7;UBERON:0003351!3.39e-11!6;UBERON:0000974!5.10e-10!10 | |ontology_enrichment_uberon=UBERON:0002370!9.37e-17!4;UBERON:0005058!9.37e-17!4;UBERON:0009113!9.37e-17!4;UBERON:0003295!9.37e-17!4;UBERON:0005562!9.37e-17!4;UBERON:0004177!3.27e-14!7;UBERON:0003351!3.39e-11!6;UBERON:0000974!5.10e-10!10 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr13:49070828..49070853,- | |short_description=p@chr13:49070828..49070853,- | ||
}} | }} |
Latest revision as of 16:31, 24 July 2015
Short description: | p@chr13:49070828..49070853, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:49070828..49070853, - |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.16e-18 | 1 |
immature NK T cell | 3.16e-18 | 1 |
effector T cell | 3.16e-18 | 1 |
mature NK T cell | 3.16e-18 | 1 |
immature NK T cell stage IV | 3.16e-18 | 1 |
immature NK T cell stage I | 3.16e-18 | 1 |
immature NK T cell stage II | 3.16e-18 | 1 |
immature NK T cell stage III | 3.16e-18 | 1 |
T cell | 5.48e-11 | 25 |
pro-T cell | 5.48e-11 | 25 |
thymocyte | 8.69e-10 | 2 |
double negative thymocyte | 8.69e-10 | 2 |
double-positive, alpha-beta thymocyte | 8.69e-10 | 2 |
DN4 thymocyte | 8.69e-10 | 2 |
DN1 thymic pro-T cell | 8.69e-10 | 2 |
DN2 thymocyte | 8.69e-10 | 2 |
DN3 thymocyte | 8.69e-10 | 2 |
immature single positive thymocyte | 8.69e-10 | 2 |
early T lineage precursor | 8.69e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.63e-11 | 39 |
hematologic cancer | 3.24e-08 | 51 |
immune system cancer | 3.24e-08 | 51 |