FFCP PHASE1:Hg19::chr14:105165705..105165720,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:105165705..105165720,+ | |||
|description=CAGE_peak_at_chr14:105165705..105165720,+ | |description=CAGE_peak_at_chr14:105165705..105165720,+ | ||
|id=chr14:105165705..105165720,+ | |id=chr14:105165705..105165720,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.01e-10;2!UBERON:0006241;3.89e-07;3!UBERON:0003057;3.89e-07;3!UBERON:0006601;8.53e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-94!115;UBERON:0001049!1.69e-27!57;UBERON:0005068!1.69e-27!57;UBERON:0006241!1.69e-27!57;UBERON:0007135!1.69e-27!57;UBERON:0003075!1.65e-23!86;UBERON:0007284!1.65e-23!86;UBERON:0002346!5.83e-22!90;UBERON:0005743!1.56e-21!86;UBERON:0001017!1.86e-21!82;UBERON:0002616!1.19e-20!59;UBERON:0003080!2.04e-19!42;UBERON:0000955!6.65e-19!69;UBERON:0006238!6.65e-19!69;UBERON:0000073!1.69e-18!94;UBERON:0001016!1.69e-18!94;UBERON:0002780!4.36e-18!41;UBERON:0001890!4.36e-18!41;UBERON:0006240!4.36e-18!41;UBERON:0001893!2.22e-15!34;UBERON:0002791!2.90e-14!33;UBERON:0002020!1.47e-13!34;UBERON:0003528!1.47e-13!34;UBERON:0000153!2.63e-13!129;UBERON:0007811!2.63e-13!129;UBERON:0001869!9.69e-13!32;UBERON:0003056!9.93e-13!61;UBERON:0002298!4.47e-12!8;UBERON:0000033!9.22e-12!123;UBERON:0004121!1.21e-10!169;UBERON:0002619!2.74e-10!22;UBERON:0000924!3.86e-10!173;UBERON:0006601!3.86e-10!173;UBERON:0000062!6.93e-10!511;UBERON:0001950!1.00e-09!20;UBERON:0004111!1.16e-09!241;UBERON:0000477!2.12e-09!286;UBERON:0003076!2.82e-09!15;UBERON:0003057!2.82e-09!15;UBERON:0000481!3.60e-09!347;UBERON:0000956!9.42e-09!25;UBERON:0000203!9.42e-09!25;UBERON:0000025!1.32e-08!194;UBERON:0001896!3.13e-07!3;UBERON:0005290!3.13e-07!3;UBERON:0010096!3.13e-07!3;UBERON:0002240!4.24e-07!3;UBERON:0006947!6.32e-07!3;UBERON:0004054!6.32e-07!3;UBERON:0003978!7.70e-07!3;UBERON:0009751!7.70e-07!3;UBERON:0000946!7.70e-07!3;UBERON:0002523!7.70e-07!3;UBERON:0005983!7.70e-07!3;UBERON:0002165!7.70e-07!3;UBERON:0002062!7.70e-07!3;UBERON:0007280!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.79e-14;3!UBERON:0005290;4.79e-14;3!UBERON:0007023;1.78e-10;114!UBERON:0003135;3.97e-10;11!UBERON:0002360;1.73e-09;2!UBERON:0000094;1.73e-09;2!UBERON:0010743;1.73e-09;2!UBERON:0002298;3.05e-07;6!UBERON:0002240;3.89e-07;3!UBERON:0005174;3.89e-07;3!UBERON:0001137;3.89e-07;3!UBERON:0003978;8.16e-07;3!UBERON:0000946;8.16e-07;3!UBERON:0003101;9.16e-07;22!UBERON:0000079;9.16e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.39e-40,114;UBERON:0001896,5.62e-14,3;UBERON:0005290,5.62e-14,3;UBERON:0010096,5.62e-14,3;UBERON:0003135,2.75e-10,11;UBERON:0002360,1.22e-09,2;UBERON:0000094,1.22e-09,2;UBERON:0010743,1.22e-09,2;UBERON:0003076,2.46e-07,15;UBERON:0003057,2.46e-07,15;UBERON:0002298,3.30e-07,6;UBERON:0002240,3.61e-07,3;UBERON:0005174,3.61e-07,3;UBERON:0001137,3.61e-07,3;UBERON:0003101,6.58e-07,22;UBERON:0000079,6.58e-07,22;UBERON:0003978,8.55e-07,3;UBERON:0009751,8.55e-07,3;UBERON:0000946,8.55e-07,3;UBERON:0002523,8.55e-07,3;UBERON:0005983,8.55e-07,3;UBERON:0006947,8.55e-07,3;UBERON:0002165,8.55e-07,3;UBERON:0004054,8.55e-07,3;UBERON:0002062,8.55e-07,3;UBERON:0007280,8.55e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,0.789147245095469,0,0,2.90799823828566,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,1.53569778007781,0,0,3.07801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,1.83309043480088,0,0,0,1.21322039365219,2.40773294189637,0.234264445725339,0,0,0,1.57833761139756,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.872901148395775,0,3.38971111170799,0,0,0.569797163602908,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,1.39641200636127,2.29160424011684,0.717873024576814,0.199679000498991,1.28767814440971,1.11585728720936,1.5452198671947,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,1.09349201984444,0,0.630445658393585,1.62609223218494,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.52893040697076,0,0,0.427149650270779,3.30129040709298,0.828478110694391,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0.886068179966986,0,0,1.14681839138014,2.44043913381075,2.91853093824502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.484100767249525,0.645902582527404,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0.261906694481422,0,0,0.540300676947157,0,0.206686796501184,1.07806877329642,0,0,2.97726707033577,0,0,0.535701835878287,0.336283722218824,0,0,0.266107110487916,0,0,0.815636795721981,0.986591603442736,0,0,1.72684804271131,0.157115589916002,0,0,0,0,5.86107662248582,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.615976841137482,0,0,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,0.980593287015622,0,0.785233868459781,3.56455680392503,2.5359343655004,0,0.0939839179798536,0.644578879735772,0,0,0,0,0,1.37618785021362,6.16360207551241,0,1.01987235286372,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,4.09204970378493,5.62724673327975,0,0.930896962757057,2.55880778281177,0.476128862927481,0,0.248298857183432,0,0.318235791390825,0.202117188958219,1.08858373948481,1.71116650542641,0.404112318087525,0.645499848534087,0.665320713092027,0,0,0,0,0,4.15620910221746,1.22068853494722,1.33151354837103,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,0.789147245095469,0,0,2.90799823828566,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,1.53569778007781,0,0,3.07801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,1.83309043480088,0,0,0,1.21322039365219,2.40773294189637,0.234264445725339,0,0,0,1.57833761139756,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.872901148395775,0,3.38971111170799,0,0,0.569797163602908,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,1.39641200636127,2.29160424011684,0.717873024576814,0.199679000498991,1.28767814440971,1.11585728720936,1.5452198671947,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,1.09349201984444,0,0.630445658393585,1.62609223218494,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.52893040697076,0,0,0.427149650270779,3.30129040709298,0.828478110694391,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0.886068179966986,0,0,1.14681839138014,2.44043913381075,2.91853093824502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.484100767249525,0.645902582527404,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0.261906694481422,0,0,0.540300676947157,0,0.206686796501184,1.07806877329642,0,0,2.97726707033577,0,0,0.535701835878287,0.336283722218824,0,0,0.266107110487916,0,0,0.815636795721981,0.986591603442736,0,0,1.72684804271131,0.157115589916002,0,0,0,0,5.86107662248582,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.615976841137482,0,0,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,0.980593287015622,0,0.785233868459781,3.56455680392503,2.5359343655004,0,0.0939839179798536,0.644578879735772,0,0,0,0,0,1.37618785021362,6.16360207551241,0,1.01987235286372,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,4.09204970378493,5.62724673327975,0,0.930896962757057,2.55880778281177,0.476128862927481,0,0.248298857183432,0,0.318235791390825,0.202117188958219,1.08858373948481,1.71116650542641,0.404112318087525,0.645499848534087,0.665320713092027,0,0,0,0,0,4.15620910221746,1.22068853494722,1.33151354837103,2.01273793591026,0 | ||
|short_description=p@chr14:105165705..105165720,+ | |short_description=p@chr14:105165705..105165720,+ | ||
}} | }} |
Latest revision as of 18:26, 24 July 2015
Short description: | p@chr14:105165705..105165720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105165705..105165720, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.39e-40 | 114 |
medulla oblongata | 5.62e-14 | 3 |
myelencephalon | 5.62e-14 | 3 |
future myelencephalon | 5.62e-14 | 3 |
male reproductive organ | 2.75e-10 | 11 |
meninx | 1.22e-09 | 2 |
membrane organ | 1.22e-09 | 2 |
meningeal cluster | 1.22e-09 | 2 |
posterior neural tube | 2.46e-07 | 15 |
chordal neural plate | 2.46e-07 | 15 |
brainstem | 3.30e-07 | 6 |
spinal cord | 3.61e-07 | 3 |
dorsal region element | 3.61e-07 | 3 |
dorsum | 3.61e-07 | 3 |
male organism | 6.58e-07 | 22 |
male reproductive system | 6.58e-07 | 22 |
valve | 8.55e-07 | 3 |
cardiac mesenchyme | 8.55e-07 | 3 |
cardial valve | 8.55e-07 | 3 |
tunica intima | 8.55e-07 | 3 |
heart layer | 8.55e-07 | 3 |
male genital duct | 8.55e-07 | 3 |
endocardium | 8.55e-07 | 3 |
internal male genitalia | 8.55e-07 | 3 |
endocardial cushion | 8.55e-07 | 3 |
presumptive endocardium | 8.55e-07 | 3 |