FFCP PHASE1:Hg19::chr14:105493753..105493756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:105493753..105493756,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr14:105493753..105493756,+ | |description=CAGE_peak_at_chr14:105493753..105493756,+ | ||
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|ontology_enrichment_celltype=CL:0002057!4.98e-40!42;CL:0000860!1.39e-38!45;CL:0000766!1.77e-30!76;CL:0000839!6.86e-29!70;CL:0002194!1.40e-28!63;CL:0000576!1.40e-28!63;CL:0000040!1.40e-28!63;CL:0000559!1.40e-28!63;CL:0000557!2.67e-28!71;CL:0002009!2.49e-27!65;CL:0000763!1.63e-21!112;CL:0000049!1.63e-21!112;CL:0000738!1.25e-20!140;CL:0002031!8.85e-20!124;CL:0002087!2.65e-19!119;CL:0000037!7.15e-18!172;CL:0000566!7.15e-18!172;CL:0002032!1.42e-17!165;CL:0000837!1.42e-17!165;CL:0000988!8.86e-17!182;CL:0002393!2.17e-08!9;CL:0002397!2.17e-08!9 | |ontology_enrichment_celltype=CL:0002057!4.98e-40!42;CL:0000860!1.39e-38!45;CL:0000766!1.77e-30!76;CL:0000839!6.86e-29!70;CL:0002194!1.40e-28!63;CL:0000576!1.40e-28!63;CL:0000040!1.40e-28!63;CL:0000559!1.40e-28!63;CL:0000557!2.67e-28!71;CL:0002009!2.49e-27!65;CL:0000763!1.63e-21!112;CL:0000049!1.63e-21!112;CL:0000738!1.25e-20!140;CL:0002031!8.85e-20!124;CL:0002087!2.65e-19!119;CL:0000037!7.15e-18!172;CL:0000566!7.15e-18!172;CL:0002032!1.42e-17!165;CL:0000837!1.42e-17!165;CL:0000988!8.86e-17!182;CL:0002393!2.17e-08!9;CL:0002397!2.17e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-46;33!CL:0002057;2.24e-46;33!CL:0000473;1.62e-33;39!CL:0000234;1.62e-33;39!CL:0000576;1.15e-27;48!CL:0000766;1.56e-16;69!CL:0000317;1.36e-14;2!CL:1000448;1.36e-14;2!CL:0002308;1.36e-14;2!CL:0002140;1.36e-14;2!CL:0002087;3.69e-08;104!CL:0000763;3.60e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.24e-46;33!CL:0002057;2.24e-46;33!CL:0000473;1.62e-33;39!CL:0000234;1.62e-33;39!CL:0000576;1.15e-27;48!CL:0000766;1.56e-16;69!CL:0000317;1.36e-14;2!CL:1000448;1.36e-14;2!CL:0002308;1.36e-14;2!CL:0002140;1.36e-14;2!CL:0002087;3.69e-08;104!CL:0000763;3.60e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.71e-50,42;CL:0002057,2.71e-50,42;CL:0000473,1.41e-43,48;CL:0000234,1.41e-43,48;CL:0002194,3.61e-34,59;CL:0000576,3.61e-34,59;CL:0000040,3.61e-34,59;CL:0000559,3.61e-34,59;CL:0002009,5.91e-33,61;CL:0000839,3.10e-30,66;CL:0000557,9.72e-30,67;CL:0000766,1.84e-27,72;CL:0002087,5.54e-18,115;CL:0000763,3.15e-17,108;CL:0000049,3.15e-17,108;CL:0002031,4.37e-17,120;CL:0000738,1.17e-14,136;CL:0000317,2.07e-14,2;CL:1000448,2.07e-14,2;CL:0002308,2.07e-14,2;CL:0002140,2.07e-14,2;CL:0002032,8.05e-12,161;CL:0000837,8.05e-12,161;CL:0000037,3.54e-11,168;CL:0000988,2.01e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.56e-40;42!CL:0000049;9.37e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.56e-40;42!CL:0000049;9.37e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.02e-30!80;UBERON:0001474!5.33e-28!86;UBERON:0002390!5.51e-25!102;UBERON:0003061!5.51e-25!102;UBERON:0004765!3.85e-24!101;UBERON:0001434!3.85e-24!101;UBERON:0002193!1.98e-22!112;UBERON:0002405!3.20e-20!115;UBERON:0002204!9.50e-13!167;UBERON:0003081!1.57e-10!216 | |ontology_enrichment_uberon=UBERON:0002371!9.02e-30!80;UBERON:0001474!5.33e-28!86;UBERON:0002390!5.51e-25!102;UBERON:0003061!5.51e-25!102;UBERON:0004765!3.85e-24!101;UBERON:0001434!3.85e-24!101;UBERON:0002193!1.98e-22!112;UBERON:0002405!3.20e-20!115;UBERON:0002204!9.50e-13!167;UBERON:0003081!1.57e-10!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.36e-14;2!UBERON:0007771;1.36e-14;2!UBERON:0003297;1.36e-14;2!UBERON:0001821;1.36e-14;2!UBERON:0003487;1.36e-14;2!UBERON:0001820;1.36e-14;2 | |ontology_enrichment_uberon_v019=UBERON:0002419;1.36e-14;2!UBERON:0007771;1.36e-14;2!UBERON:0003297;1.36e-14;2!UBERON:0001821;1.36e-14;2!UBERON:0003487;1.36e-14;2!UBERON:0001820;1.36e-14;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.46e-26,76;UBERON:0001474,9.91e-24,82;UBERON:0004765,2.46e-21,90;UBERON:0002405,1.53e-20,93;UBERON:0002390,2.52e-19,98;UBERON:0003061,2.52e-19,98;UBERON:0001434,7.14e-19,100;UBERON:0002193,3.15e-17,108;UBERON:0002419,2.07e-14,2;UBERON:0007771,2.07e-14,2;UBERON:0003297,2.07e-14,2;UBERON:0001821,2.07e-14,2;UBERON:0003487,2.07e-14,2;UBERON:0001820,2.07e-14,2;UBERON:0005089,2.07e-14,2;UBERON:0005088,2.07e-14,2;UBERON:0002204,6.16e-10,167;UBERON:0003081,1.45e-07,203 | |||
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|short_description=p@chr14:105493753..105493756,+ | |short_description=p@chr14:105493753..105493756,+ | ||
}} | }} |
Latest revision as of 18:29, 24 July 2015
Short description: | p@chr14:105493753..105493756, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105493753..105493756, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.71e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-50 | 42 |
defensive cell | 1.41e-43 | 48 |
phagocyte | 1.41e-43 | 48 |
monopoietic cell | 3.61e-34 | 59 |
monocyte | 3.61e-34 | 59 |
monoblast | 3.61e-34 | 59 |
promonocyte | 3.61e-34 | 59 |
macrophage dendritic cell progenitor | 5.91e-33 | 61 |
myeloid lineage restricted progenitor cell | 3.10e-30 | 66 |
granulocyte monocyte progenitor cell | 9.72e-30 | 67 |
myeloid leukocyte | 1.84e-27 | 72 |
nongranular leukocyte | 5.54e-18 | 115 |
myeloid cell | 3.15e-17 | 108 |
common myeloid progenitor | 3.15e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 4.37e-17 | 120 |
leukocyte | 1.17e-14 | 136 |
sebum secreting cell | 2.07e-14 | 2 |
epithelial cell of sweat gland | 2.07e-14 | 2 |
epithelial cell of skin gland | 2.07e-14 | 2 |
acinar cell of sebaceous gland | 2.07e-14 | 2 |
hematopoietic oligopotent progenitor cell | 8.05e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.05e-12 | 161 |
hematopoietic stem cell | 3.54e-11 | 168 |
hematopoietic cell | 2.01e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.46e-26 | 76 |
bone element | 9.91e-24 | 82 |
skeletal element | 2.46e-21 | 90 |
immune system | 1.53e-20 | 93 |
hematopoietic system | 2.52e-19 | 98 |
blood island | 2.52e-19 | 98 |
skeletal system | 7.14e-19 | 100 |
hemolymphoid system | 3.15e-17 | 108 |
skin gland | 2.07e-14 | 2 |
epidermis gland | 2.07e-14 | 2 |
gland of integumental system | 2.07e-14 | 2 |
sebaceous gland | 2.07e-14 | 2 |
skin sebaceous gland | 2.07e-14 | 2 |
sweat gland | 2.07e-14 | 2 |
sweat gland placode | 2.07e-14 | 2 |
sebaceous gland placode | 2.07e-14 | 2 |
musculoskeletal system | 6.16e-10 | 167 |
lateral plate mesoderm | 1.45e-07 | 203 |