FFCP PHASE1:Hg19::chr15:33446981..33446997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33446981..33446997,- | |||
|coexpression_cluster_id=C897 | |||
|description=CAGE_peak_at_chr15:33446981..33446997,- | |description=CAGE_peak_at_chr15:33446981..33446997,- | ||
|id=chr15:33446981..33446997,- | |id=chr15:33446981..33446997,- | ||
|ontology_enrichment_celltype=CL:0002194!9.08e-35!63;CL:0000576!9.08e-35!63;CL:0000040!9.08e-35!63;CL:0000559!9.08e-35!63;CL:0002009!3.34e-33!65;CL:0002057!1.40e-30!42;CL:0000839!1.10e-29!70;CL:0000557!4.80e-29!71;CL:0000766!8.00e-29!76;CL:0000860!1.06e-27!45;CL:0000763!1.48e-14!112;CL:0000049!1.48e-14!112;CL:0002087!1.29e-13!119;CL:0000738!1.05e-10!140;CL:0002031!1.99e-10!124 | |ontology_enrichment_celltype=CL:0002194!9.08e-35!63;CL:0000576!9.08e-35!63;CL:0000040!9.08e-35!63;CL:0000559!9.08e-35!63;CL:0002009!3.34e-33!65;CL:0002057!1.40e-30!42;CL:0000839!1.10e-29!70;CL:0000557!4.80e-29!71;CL:0000766!8.00e-29!76;CL:0000860!1.06e-27!45;CL:0000763!1.48e-14!112;CL:0000049!1.48e-14!112;CL:0002087!1.29e-13!119;CL:0000738!1.05e-10!140;CL:0002031!1.99e-10!124 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.70e-44;39!CL:0000234;1.70e-44;39!CL:0000860;5.15e-35;33!CL:0002057;5.15e-35;33!CL:0000576;1.13e-31;48!CL:0000766;2.80e-25;69!CL:0000235;3.93e-24;6!CL:0000148;3.67e-15;10!CL:0002619;3.79e-14;3!CL:0000147;1.26e-10;14!CL:0000763;6.32e-10;100!CL:0002087;2.12e-07;104!CL:0000710;3.17e-07;20!CL:0002567;7.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-58,48;CL:0000234,1.12e-58,48;CL:0002194,1.49e-57,59;CL:0000576,1.49e-57,59;CL:0000040,1.49e-57,59;CL:0000559,1.49e-57,59;CL:0002009,1.87e-55,61;CL:0000839,9.27e-51,66;CL:0000557,6.66e-50,67;CL:0000766,5.66e-46,72;CL:0000860,1.18e-40,42;CL:0002057,1.18e-40,42;CL:0000763,2.50e-28,108;CL:0000049,2.50e-28,108;CL:0002087,3.58e-26,115;CL:0002031,8.74e-25,120;CL:0000235,7.41e-24,6;CL:0000738,4.98e-21,136;CL:0002032,1.18e-16,161;CL:0000837,1.18e-16,161;CL:0000037,1.15e-15,168;CL:0000148,3.10e-15,10;CL:0000541,3.10e-15,10;CL:0000988,1.65e-14,177;CL:0002619,3.80e-14,3;CL:0000147,1.12e-10,14;CL:0000219,1.91e-09,386;CL:0000710,2.93e-07,20;CL:0002567,7.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-32;42!CL:0000049;1.70e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.45e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.85e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.82e-26!80;UBERON:0002390!5.23e-26!102;UBERON:0003061!5.23e-26!102;UBERON:0001474!6.16e-26!86;UBERON:0007023!1.64e-23!115;UBERON:0002193!3.19e-23!112;UBERON:0004765!1.70e-21!101;UBERON:0001434!1.70e-21!101;UBERON:0002405!6.31e-20!115;UBERON:0002204!3.24e-13!167;UBERON:0000062!1.06e-10!511;UBERON:0000467!4.56e-09!625;UBERON:0000922!5.14e-09!612;UBERON:0000480!5.41e-09!626;UBERON:0003081!5.43e-09!216;UBERON:0001049!7.78e-09!57;UBERON:0005068!7.78e-09!57;UBERON:0006241!7.78e-09!57;UBERON:0007135!7.78e-09!57;UBERON:0000923!9.63e-09!604;UBERON:0005291!9.63e-09!604;UBERON:0006598!9.63e-09!604;UBERON:0002532!9.63e-09!604;UBERON:0002050!1.14e-08!605;UBERON:0005423!1.14e-08!605;UBERON:0000468!5.04e-08!659;UBERON:0002308!2.55e-07!9;UBERON:0000125!2.55e-07!9;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!1.82e-26!80;UBERON:0002390!5.23e-26!102;UBERON:0003061!5.23e-26!102;UBERON:0001474!6.16e-26!86;UBERON:0007023!1.64e-23!115;UBERON:0002193!3.19e-23!112;UBERON:0004765!1.70e-21!101;UBERON:0001434!1.70e-21!101;UBERON:0002405!6.31e-20!115;UBERON:0002204!3.24e-13!167;UBERON:0000062!1.06e-10!511;UBERON:0000467!4.56e-09!625;UBERON:0000922!5.14e-09!612;UBERON:0000480!5.41e-09!626;UBERON:0003081!5.43e-09!216;UBERON:0001049!7.78e-09!57;UBERON:0005068!7.78e-09!57;UBERON:0006241!7.78e-09!57;UBERON:0007135!7.78e-09!57;UBERON:0000923!9.63e-09!604;UBERON:0005291!9.63e-09!604;UBERON:0006598!9.63e-09!604;UBERON:0002532!9.63e-09!604;UBERON:0002050!1.14e-08!605;UBERON:0005423!1.14e-08!605;UBERON:0000468!5.04e-08!659;UBERON:0002308!2.55e-07!9;UBERON:0000125!2.55e-07!9;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.38e-43,76;UBERON:0001474,2.36e-42,82;UBERON:0004765,5.87e-38,90;UBERON:0002405,4.90e-34,93;UBERON:0001434,1.92e-33,100;UBERON:0002390,6.10e-32,98;UBERON:0003061,6.10e-32,98;UBERON:0002193,2.50e-28,108;UBERON:0002204,4.31e-17,167;UBERON:0003081,8.92e-13,203 | |||
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|short_description=p@chr15:33446981..33446997,- | |short_description=p@chr15:33446981..33446997,- | ||
}} | }} |
Latest revision as of 00:52, 25 July 2015
Short description: | p@chr15:33446981..33446997, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33446981..33446997, - |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.12e-58 | 48 |
phagocyte | 1.12e-58 | 48 |
monopoietic cell | 1.49e-57 | 59 |
monocyte | 1.49e-57 | 59 |
monoblast | 1.49e-57 | 59 |
promonocyte | 1.49e-57 | 59 |
macrophage dendritic cell progenitor | 1.87e-55 | 61 |
myeloid lineage restricted progenitor cell | 9.27e-51 | 66 |
granulocyte monocyte progenitor cell | 6.66e-50 | 67 |
myeloid leukocyte | 5.66e-46 | 72 |
classical monocyte | 1.18e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-40 | 42 |
myeloid cell | 2.50e-28 | 108 |
common myeloid progenitor | 2.50e-28 | 108 |
nongranular leukocyte | 3.58e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 8.74e-25 | 120 |
macrophage | 7.41e-24 | 6 |
leukocyte | 4.98e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.18e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-16 | 161 |
hematopoietic stem cell | 1.15e-15 | 168 |
melanocyte | 3.10e-15 | 10 |
melanoblast | 3.10e-15 | 10 |
hematopoietic cell | 1.65e-14 | 177 |
adult endothelial progenitor cell | 3.80e-14 | 3 |
pigment cell | 1.12e-10 | 14 |
motile cell | 1.91e-09 | 386 |
neurecto-epithelial cell | 2.93e-07 | 20 |
light melanocyte | 7.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.38e-43 | 76 |
bone element | 2.36e-42 | 82 |
skeletal element | 5.87e-38 | 90 |
immune system | 4.90e-34 | 93 |
skeletal system | 1.92e-33 | 100 |
hematopoietic system | 6.10e-32 | 98 |
blood island | 6.10e-32 | 98 |
hemolymphoid system | 2.50e-28 | 108 |
musculoskeletal system | 4.31e-17 | 167 |
lateral plate mesoderm | 8.92e-13 | 203 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.85e-10 | 2 |