FFCP PHASE1:Hg19::chr15:33446981..33446997,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:33446981..33446997,- | |||
|coexpression_cluster_id=C897 | |||
|description=CAGE_peak_at_chr15:33446981..33446997,- | |||
|id=chr15:33446981..33446997,- | |||
|ontology_enrichment_celltype=CL:0002194!9.08e-35!63;CL:0000576!9.08e-35!63;CL:0000040!9.08e-35!63;CL:0000559!9.08e-35!63;CL:0002009!3.34e-33!65;CL:0002057!1.40e-30!42;CL:0000839!1.10e-29!70;CL:0000557!4.80e-29!71;CL:0000766!8.00e-29!76;CL:0000860!1.06e-27!45;CL:0000763!1.48e-14!112;CL:0000049!1.48e-14!112;CL:0002087!1.29e-13!119;CL:0000738!1.05e-10!140;CL:0002031!1.99e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.70e-44;39!CL:0000234;1.70e-44;39!CL:0000860;5.15e-35;33!CL:0002057;5.15e-35;33!CL:0000576;1.13e-31;48!CL:0000766;2.80e-25;69!CL:0000235;3.93e-24;6!CL:0000148;3.67e-15;10!CL:0002619;3.79e-14;3!CL:0000147;1.26e-10;14!CL:0000763;6.32e-10;100!CL:0002087;2.12e-07;104!CL:0000710;3.17e-07;20!CL:0002567;7.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-58,48;CL:0000234,1.12e-58,48;CL:0002194,1.49e-57,59;CL:0000576,1.49e-57,59;CL:0000040,1.49e-57,59;CL:0000559,1.49e-57,59;CL:0002009,1.87e-55,61;CL:0000839,9.27e-51,66;CL:0000557,6.66e-50,67;CL:0000766,5.66e-46,72;CL:0000860,1.18e-40,42;CL:0002057,1.18e-40,42;CL:0000763,2.50e-28,108;CL:0000049,2.50e-28,108;CL:0002087,3.58e-26,115;CL:0002031,8.74e-25,120;CL:0000235,7.41e-24,6;CL:0000738,4.98e-21,136;CL:0002032,1.18e-16,161;CL:0000837,1.18e-16,161;CL:0000037,1.15e-15,168;CL:0000148,3.10e-15,10;CL:0000541,3.10e-15,10;CL:0000988,1.65e-14,177;CL:0002619,3.80e-14,3;CL:0000147,1.12e-10,14;CL:0000219,1.91e-09,386;CL:0000710,2.93e-07,20;CL:0002567,7.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-32;42!CL:0000049;1.70e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.45e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.85e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.82e-26!80;UBERON:0002390!5.23e-26!102;UBERON:0003061!5.23e-26!102;UBERON:0001474!6.16e-26!86;UBERON:0007023!1.64e-23!115;UBERON:0002193!3.19e-23!112;UBERON:0004765!1.70e-21!101;UBERON:0001434!1.70e-21!101;UBERON:0002405!6.31e-20!115;UBERON:0002204!3.24e-13!167;UBERON:0000062!1.06e-10!511;UBERON:0000467!4.56e-09!625;UBERON:0000922!5.14e-09!612;UBERON:0000480!5.41e-09!626;UBERON:0003081!5.43e-09!216;UBERON:0001049!7.78e-09!57;UBERON:0005068!7.78e-09!57;UBERON:0006241!7.78e-09!57;UBERON:0007135!7.78e-09!57;UBERON:0000923!9.63e-09!604;UBERON:0005291!9.63e-09!604;UBERON:0006598!9.63e-09!604;UBERON:0002532!9.63e-09!604;UBERON:0002050!1.14e-08!605;UBERON:0005423!1.14e-08!605;UBERON:0000468!5.04e-08!659;UBERON:0002308!2.55e-07!9;UBERON:0000125!2.55e-07!9;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.38e-43,76;UBERON:0001474,2.36e-42,82;UBERON:0004765,5.87e-38,90;UBERON:0002405,4.90e-34,93;UBERON:0001434,1.92e-33,100;UBERON:0002390,6.10e-32,98;UBERON:0003061,6.10e-32,98;UBERON:0002193,2.50e-28,108;UBERON:0002204,4.31e-17,167;UBERON:0003081,8.92e-13,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,1.66198622559563,1.40381113229099,1.08505435357926,13.8827594028753,12.9557466407592,11.07574940827,0.726991193897824,0.755751887377619,0.485168122375632,0.697287110717054,2.05583944010913,0.929119112685311,1.43846196161075,1.2808035326455,1.41889337933151,1.72372840368309,3.22742341791913,2.70852973188684,1.12945403725563,2.18324920046277,1.12361742222542,0,0.962787081228281,0.639337125799041,0.329851300186716,1.59570926097305,0.852449501065388,1.45104619314292,1.70215567407342,2.4912889959823,2.26123798731069,2.08593167368081,1.52032191293582,0,4.78760926783834,2.53169909952708,0,0,0,0.673971786878971,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.175669571386252,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,1.17002132569619,2.52672975890838,0,0,0,0,0,0,0,0,0,0,0,2.73040945456327,6.11181480893244,7.03304683260282,0,3.59896224461632,4.80548892550268,8.28896654628677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0.579125226670317,0,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0,0,0,0.461701551022782,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0,0,1.70859860108311,0.471612915298998,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0.751145584238999,0,0.998361463831671,0.620964029413834,0,0,3.63957882099955,22.2662960165075,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0.655219697692825,0,0,0,0,0,0,1.47284760201473,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,1.39241355481392,0.0752103283492573,0.80682027481408,0,0,0,0,0.270150338473579,0,0.620060389503552,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,1.13831095675649,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0,0,0,0,3.07349139959622,0,0,0,0,0,0,0,0.430227358820278,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.385870790539723,0,0,0.245148321753905,0,1.37415926980462,0.594092800654172,0,0.169927114687817,0.469919589899268,0.837952543656503,0,0,0,0,0,0,0.573358332605805,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.827463966895162,0,0.476128862927481,0.258355639344024,0.682821857254437,0,0.25458863311266,0,0,0,0,0.717222053926764,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p@chr15:33446981..33446997,- | |||
}} |
Latest revision as of 00:52, 25 July 2015
Short description: | p@chr15:33446981..33446997, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33446981..33446997, - |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.12e-58 | 48 |
phagocyte | 1.12e-58 | 48 |
monopoietic cell | 1.49e-57 | 59 |
monocyte | 1.49e-57 | 59 |
monoblast | 1.49e-57 | 59 |
promonocyte | 1.49e-57 | 59 |
macrophage dendritic cell progenitor | 1.87e-55 | 61 |
myeloid lineage restricted progenitor cell | 9.27e-51 | 66 |
granulocyte monocyte progenitor cell | 6.66e-50 | 67 |
myeloid leukocyte | 5.66e-46 | 72 |
classical monocyte | 1.18e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-40 | 42 |
myeloid cell | 2.50e-28 | 108 |
common myeloid progenitor | 2.50e-28 | 108 |
nongranular leukocyte | 3.58e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 8.74e-25 | 120 |
macrophage | 7.41e-24 | 6 |
leukocyte | 4.98e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.18e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-16 | 161 |
hematopoietic stem cell | 1.15e-15 | 168 |
melanocyte | 3.10e-15 | 10 |
melanoblast | 3.10e-15 | 10 |
hematopoietic cell | 1.65e-14 | 177 |
adult endothelial progenitor cell | 3.80e-14 | 3 |
pigment cell | 1.12e-10 | 14 |
motile cell | 1.91e-09 | 386 |
neurecto-epithelial cell | 2.93e-07 | 20 |
light melanocyte | 7.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.38e-43 | 76 |
bone element | 2.36e-42 | 82 |
skeletal element | 5.87e-38 | 90 |
immune system | 4.90e-34 | 93 |
skeletal system | 1.92e-33 | 100 |
hematopoietic system | 6.10e-32 | 98 |
blood island | 6.10e-32 | 98 |
hemolymphoid system | 2.50e-28 | 108 |
musculoskeletal system | 4.31e-17 | 167 |
lateral plate mesoderm | 8.92e-13 | 203 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.85e-10 | 2 |