FFCP PHASE1:Hg19::chr15:90346918..90346991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:90346918..90346991,- | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90346918..90346991,- | |description=CAGE_peak_at_chr15:90346918..90346991,- | ||
|id=chr15:90346918..90346991,- | |id=chr15:90346918..90346991,- | ||
|ontology_enrichment_celltype=CL:0000048!5.45e-26!430;CL:0000723!1.84e-24!436;CL:0000034!1.64e-22!444;CL:0002320!1.21e-18!365;CL:0002371!4.83e-17!591;CL:0000134!1.43e-16!358;CL:0000055!8.17e-16!180;CL:0000057!2.38e-15!75;CL:0000144!1.64e-12!625;CL:0000219!4.33e-12!390;CL:0002057!1.18e-10!42;CL:0000680!1.54e-10!57;CL:0000056!1.54e-10!57;CL:0000355!1.54e-10!57;CL:0000766!2.39e-10!76;CL:0000183!5.58e-10!59;CL:0002620!1.66e-09!23;CL:0002194!3.08e-09!63;CL:0000576!3.08e-09!63;CL:0000040!3.08e-09!63;CL:0000559!3.08e-09!63;CL:0000187!3.54e-09!54;CL:0000860!4.46e-09!45;CL:0002009!1.72e-08!65;CL:0000557!3.22e-08!71;CL:0000839!6.34e-08!70;CL:0000548!4.07e-07!679;CL:0000004!4.07e-07!679;CL:0000255!4.07e-07!679;CL:0000393!6.36e-07!60;CL:0000211!6.36e-07!60;CL:0000012!9.77e-07!682 | |ontology_enrichment_celltype=CL:0000048!5.45e-26!430;CL:0000723!1.84e-24!436;CL:0000034!1.64e-22!444;CL:0002320!1.21e-18!365;CL:0002371!4.83e-17!591;CL:0000134!1.43e-16!358;CL:0000055!8.17e-16!180;CL:0000057!2.38e-15!75;CL:0000144!1.64e-12!625;CL:0000219!4.33e-12!390;CL:0002057!1.18e-10!42;CL:0000680!1.54e-10!57;CL:0000056!1.54e-10!57;CL:0000355!1.54e-10!57;CL:0000766!2.39e-10!76;CL:0000183!5.58e-10!59;CL:0002620!1.66e-09!23;CL:0002194!3.08e-09!63;CL:0000576!3.08e-09!63;CL:0000040!3.08e-09!63;CL:0000559!3.08e-09!63;CL:0000187!3.54e-09!54;CL:0000860!4.46e-09!45;CL:0002009!1.72e-08!65;CL:0000557!3.22e-08!71;CL:0000839!6.34e-08!70;CL:0000548!4.07e-07!679;CL:0000004!4.07e-07!679;CL:0000255!4.07e-07!679;CL:0000393!6.36e-07!60;CL:0000211!6.36e-07!60;CL:0000012!9.77e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-17;33!CL:0002057;3.36e-17;33!CL:0000473;4.63e-15;39!CL:0000234;4.63e-15;39!CL:0000680;1.16e-07;7!CL:0000576;2.53e-07;48!CL:0002559;2.78e-07;5!CL:0002620;2.83e-07;23!CL:0000188;8.16e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.48e-20,427;CL:0000723,9.47e-20,433;CL:0000034,1.04e-18,441;CL:0002320,2.21e-14,361;CL:0000473,1.45e-13,48;CL:0000234,1.45e-13,48;CL:0000134,4.49e-13,354;CL:0000860,6.57e-13,42;CL:0002057,6.57e-13,42;CL:0002194,3.86e-10,59;CL:0000576,3.86e-10,59;CL:0000040,3.86e-10,59;CL:0000559,3.86e-10,59;CL:0000766,6.47e-10,72;CL:0000219,6.71e-10,386;CL:0000057,8.04e-10,76;CL:0002009,1.53e-09,61;CL:0000557,1.20e-08,67;CL:0000680,2.07e-08,58;CL:0000056,2.07e-08,58;CL:0000355,2.07e-08,58;CL:0000839,3.18e-08,66;CL:0002559,3.57e-07,5;CL:0002620,3.98e-07,23;CL:0000187,9.64e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.80e-19!167;UBERON:0002384!4.16e-18!375;UBERON:0004290!5.30e-14!70;UBERON:0000926!4.65e-13!448;UBERON:0004120!4.65e-13!448;UBERON:0006603!4.65e-13!448;UBERON:0000914!5.00e-13!83;UBERON:0002329!5.00e-13!83;UBERON:0003077!5.00e-13!83;UBERON:0003059!5.00e-13!83;UBERON:0007282!5.00e-13!83;UBERON:0009618!5.00e-13!83;UBERON:0007285!5.00e-13!83;UBERON:0005256!1.82e-11!143;UBERON:0000486!8.91e-11!82;UBERON:0002385!2.39e-10!63;UBERON:0001015!2.39e-10!63;UBERON:0000383!2.39e-10!63;UBERON:0001134!3.27e-10!61;UBERON:0002036!3.27e-10!61;UBERON:0003082!3.27e-10!61;UBERON:0003081!1.30e-09!216;UBERON:0002405!1.38e-09!115;UBERON:0002199!2.07e-09!45;UBERON:0002416!2.07e-09!45;UBERON:0002371!4.30e-09!80;UBERON:0001474!1.74e-08!86;UBERON:0004765!4.06e-08!101;UBERON:0001434!4.06e-08!101;UBERON:0000479!4.64e-08!787;UBERON:0002097!6.75e-08!40;UBERON:0002390!2.07e-07!102;UBERON:0003061!2.07e-07!102;UBERON:0002100!6.45e-07!216;UBERON:0002193!6.59e-07!112 | |ontology_enrichment_uberon=UBERON:0002204!3.80e-19!167;UBERON:0002384!4.16e-18!375;UBERON:0004290!5.30e-14!70;UBERON:0000926!4.65e-13!448;UBERON:0004120!4.65e-13!448;UBERON:0006603!4.65e-13!448;UBERON:0000914!5.00e-13!83;UBERON:0002329!5.00e-13!83;UBERON:0003077!5.00e-13!83;UBERON:0003059!5.00e-13!83;UBERON:0007282!5.00e-13!83;UBERON:0009618!5.00e-13!83;UBERON:0007285!5.00e-13!83;UBERON:0005256!1.82e-11!143;UBERON:0000486!8.91e-11!82;UBERON:0002385!2.39e-10!63;UBERON:0001015!2.39e-10!63;UBERON:0000383!2.39e-10!63;UBERON:0001134!3.27e-10!61;UBERON:0002036!3.27e-10!61;UBERON:0003082!3.27e-10!61;UBERON:0003081!1.30e-09!216;UBERON:0002405!1.38e-09!115;UBERON:0002199!2.07e-09!45;UBERON:0002416!2.07e-09!45;UBERON:0002371!4.30e-09!80;UBERON:0001474!1.74e-08!86;UBERON:0004765!4.06e-08!101;UBERON:0001434!4.06e-08!101;UBERON:0000479!4.64e-08!787;UBERON:0002097!6.75e-08!40;UBERON:0002390!2.07e-07!102;UBERON:0003061!2.07e-07!102;UBERON:0002100!6.45e-07!216;UBERON:0002193!6.59e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.36e-08;16!UBERON:0002036;7.36e-08;16!UBERON:0002385;1.70e-07;31!UBERON:0001015;1.70e-07;31!UBERON:0000383;1.70e-07;31!UBERON:0002073;2.78e-07;5 | |||
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| ||
|short_description=p@chr15:90346918..90346991,- | |short_description=p@chr15:90346918..90346991,- | ||
}} | }} |
Latest revision as of 05:22, 25 July 2015
Short description: | p@chr15:90346918..90346991, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90346918..90346991, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.48e-20 | 427 |
somatic stem cell | 9.47e-20 | 433 |
stem cell | 1.04e-18 | 441 |
connective tissue cell | 2.21e-14 | 361 |
defensive cell | 1.45e-13 | 48 |
phagocyte | 1.45e-13 | 48 |
mesenchymal cell | 4.49e-13 | 354 |
classical monocyte | 6.57e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.57e-13 | 42 |
monopoietic cell | 3.86e-10 | 59 |
monocyte | 3.86e-10 | 59 |
monoblast | 3.86e-10 | 59 |
promonocyte | 3.86e-10 | 59 |
myeloid leukocyte | 6.47e-10 | 72 |
motile cell | 6.71e-10 | 386 |
fibroblast | 8.04e-10 | 76 |
macrophage dendritic cell progenitor | 1.53e-09 | 61 |
granulocyte monocyte progenitor cell | 1.20e-08 | 67 |
muscle precursor cell | 2.07e-08 | 58 |
myoblast | 2.07e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-08 | 58 |
myeloid lineage restricted progenitor cell | 3.18e-08 | 66 |
hair follicle cell | 3.57e-07 | 5 |
skin fibroblast | 3.98e-07 | 23 |
muscle cell | 9.64e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.91e-18 | 167 |
connective tissue | 1.18e-13 | 371 |
dense mesenchyme tissue | 7.83e-12 | 73 |
somite | 1.49e-11 | 71 |
presomitic mesoderm | 1.49e-11 | 71 |
presumptive segmental plate | 1.49e-11 | 71 |
dermomyotome | 1.49e-11 | 71 |
trunk paraxial mesoderm | 1.49e-11 | 71 |
paraxial mesoderm | 2.98e-11 | 72 |
presumptive paraxial mesoderm | 2.98e-11 | 72 |
epithelial vesicle | 4.68e-11 | 78 |
mesoderm | 2.74e-10 | 315 |
mesoderm-derived structure | 2.74e-10 | 315 |
presumptive mesoderm | 2.74e-10 | 315 |
bone marrow | 1.52e-09 | 76 |
bone element | 1.54e-09 | 82 |
integument | 2.34e-09 | 46 |
integumental system | 2.34e-09 | 46 |
skeletal element | 2.61e-09 | 90 |
multilaminar epithelium | 3.26e-09 | 83 |
trunk mesenchyme | 7.31e-09 | 122 |
skeletal system | 1.45e-08 | 100 |
muscle tissue | 1.73e-08 | 64 |
musculature | 1.73e-08 | 64 |
musculature of body | 1.73e-08 | 64 |
skeletal muscle tissue | 4.79e-08 | 62 |
striated muscle tissue | 4.79e-08 | 62 |
myotome | 4.79e-08 | 62 |
immune system | 1.66e-07 | 93 |
hair follicle | 3.57e-07 | 5 |
hair follicle placode | 3.57e-07 | 5 |
skin of body | 5.50e-07 | 41 |
tissue | 8.46e-07 | 773 |