FFCP PHASE1:Hg19::chr16:3107014..3107025,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:3107014..3107025,+ | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_at_chr16:3107014..3107025,+ | |description=CAGE_peak_at_chr16:3107014..3107025,+ | ||
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|ontology_enrichment_celltype=CL:0000775!9.59e-26!3;CL:0000094!5.31e-10!8;CL:0002127!7.98e-10!1;CL:0000914!7.98e-10!1;CL:0000911!7.98e-10!1;CL:0000814!7.98e-10!1;CL:0002042!7.98e-10!1;CL:0002039!7.98e-10!1;CL:0002040!7.98e-10!1;CL:0002041!7.98e-10!1;CL:0000081!2.14e-07!11 | |ontology_enrichment_celltype=CL:0000775!9.59e-26!3;CL:0000094!5.31e-10!8;CL:0002127!7.98e-10!1;CL:0000914!7.98e-10!1;CL:0000911!7.98e-10!1;CL:0000814!7.98e-10!1;CL:0002042!7.98e-10!1;CL:0002039!7.98e-10!1;CL:0002040!7.98e-10!1;CL:0002041!7.98e-10!1;CL:0000081!2.14e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.11e-98;3!CL:0000094;1.04e-37;8!CL:0002127;1.84e-34;1!CL:0000911;1.84e-34;1!CL:0000814;1.84e-34;1!CL:0000081;1.07e-27;11 | |ontology_enrichment_celltype_v019=CL:0000775;1.11e-98;3!CL:0000094;1.04e-37;8!CL:0002127;1.84e-34;1!CL:0000911;1.84e-34;1!CL:0000814;1.84e-34;1!CL:0000081;1.07e-27;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.11e-98,3;CL:0000094,1.04e-37,8;CL:0002127,1.84e-34,1;CL:0000914,1.84e-34,1;CL:0000911,1.84e-34,1;CL:0000814,1.84e-34,1;CL:0002042,1.84e-34,1;CL:0002039,1.84e-34,1;CL:0002040,1.84e-34,1;CL:0002041,1.84e-34,1;CL:0000081,1.07e-27,11;CL:0000893,5.48e-18,2;CL:0002489,5.48e-18,2;CL:0000809,5.48e-18,2;CL:0000808,5.48e-18,2;CL:0000894,5.48e-18,2;CL:0000806,5.48e-18,2;CL:0000807,5.48e-18,2;CL:0000805,5.48e-18,2;CL:0002425,5.48e-18,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.48e-18;2 | |ontology_enrichment_development_v019=CL:0002425;5.48e-18;2 | ||
|ontology_enrichment_disease=DOID:225!2.77e-09!1 | |ontology_enrichment_disease=DOID:225!2.77e-09!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004913!4.15e-09!1;UBERON:0003703!4.15e-09!1;UBERON:0001174!4.15e-09!1;UBERON:0004914!4.15e-09!1;UBERON:0002038!4.50e-09!1;UBERON:0009661!4.50e-09!1;UBERON:0000178!7.94e-09!15;UBERON:0000179!7.94e-09!15;UBERON:0000463!7.94e-09!15 | |ontology_enrichment_uberon=UBERON:0004913!4.15e-09!1;UBERON:0003703!4.15e-09!1;UBERON:0001174!4.15e-09!1;UBERON:0004914!4.15e-09!1;UBERON:0002038!4.50e-09!1;UBERON:0009661!4.50e-09!1;UBERON:0000178!7.94e-09!15;UBERON:0000179!7.94e-09!15;UBERON:0000463!7.94e-09!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.12e-09,4;UBERON:0005058,1.12e-09,4;UBERON:0009113,1.12e-09,4;UBERON:0003295,1.12e-09,4;UBERON:0005562,1.12e-09,4;UBERON:0003351,7.17e-07,6 | |||
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|short_description=p@chr16:3107014..3107025,+ | |short_description=p@chr16:3107014..3107025,+ | ||
}} | }} |
Latest revision as of 08:23, 25 July 2015
Short description: | p@chr16:3107014..3107025, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3107014..3107025, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.11e-98 | 3 |
granulocyte | 1.04e-37 | 8 |
innate effector T cell | 1.84e-34 | 1 |
immature NK T cell | 1.84e-34 | 1 |
effector T cell | 1.84e-34 | 1 |
mature NK T cell | 1.84e-34 | 1 |
immature NK T cell stage IV | 1.84e-34 | 1 |
immature NK T cell stage I | 1.84e-34 | 1 |
immature NK T cell stage II | 1.84e-34 | 1 |
immature NK T cell stage III | 1.84e-34 | 1 |
blood cell | 1.07e-27 | 11 |
thymocyte | 5.48e-18 | 2 |
double negative thymocyte | 5.48e-18 | 2 |
double-positive, alpha-beta thymocyte | 5.48e-18 | 2 |
DN4 thymocyte | 5.48e-18 | 2 |
DN1 thymic pro-T cell | 5.48e-18 | 2 |
DN2 thymocyte | 5.48e-18 | 2 |
DN3 thymocyte | 5.48e-18 | 2 |
immature single positive thymocyte | 5.48e-18 | 2 |
early T lineage precursor | 5.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.12e-09 | 4 |
hemolymphoid system gland | 1.12e-09 | 4 |
thymic region | 1.12e-09 | 4 |
pharyngeal gland | 1.12e-09 | 4 |
thymus primordium | 1.12e-09 | 4 |
pharyngeal epithelium | 7.17e-07 | 6 |