FFCP PHASE1:Hg19::chr16:49891062..49891082,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:49891062..49891082,- | |||
|coexpression_cluster_id=C2377 | |coexpression_cluster_id=C2377 | ||
|description=CAGE_peak_at_chr16:49891062..49891082,- | |description=CAGE_peak_at_chr16:49891062..49891082,- | ||
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|ontology_enrichment_celltype=CL:0000047!8.12e-09!8;CL:0000540!6.60e-07!6;CL:0000031!6.60e-07!6;CL:0000404!6.60e-07!6 | |ontology_enrichment_celltype=CL:0000047!8.12e-09!8;CL:0000540!6.60e-07!6;CL:0000031!6.60e-07!6;CL:0000404!6.60e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.89e-11;5!CL:0000540;7.63e-10;6!CL:0000404;7.63e-10;6!CL:0000047;2.31e-08;2!CL:0002575;2.31e-08;2!CL:0002321;7.64e-08;15!CL:0000710;1.16e-07;20!CL:0002319;2.21e-07;25!CL:0000075;4.91e-07;27 | |ontology_enrichment_celltype_v019=CL:0002322;1.89e-11;5!CL:0000540;7.63e-10;6!CL:0000404;7.63e-10;6!CL:0000047;2.31e-08;2!CL:0002575;2.31e-08;2!CL:0002321;7.64e-08;15!CL:0000710;1.16e-07;20!CL:0002319;2.21e-07;25!CL:0000075;4.91e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.83e-16,8;CL:0000133,6.88e-13,59;CL:0002322,1.13e-11,5;CL:0000540,3.55e-10,6;CL:0000031,3.55e-10,6;CL:0000404,3.55e-10,6;CL:0000221,6.30e-10,72;CL:0002575,1.87e-08,2;CL:0000710,1.00e-07,20;CL:0002319,1.42e-07,25;CL:0000075,4.90e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000031;7.63e-10;6!CL:0000133;1.62e-07;59 | |ontology_enrichment_development_v019=CL:0000031;7.63e-10;6!CL:0000133;1.62e-07;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.22e-12,89;UBERON:0001017,1.83e-11,81;UBERON:0001905,4.31e-09,2;UBERON:0002757,4.31e-09,2;UBERON:0010134,4.31e-09,2;UBERON:0005408,4.31e-09,2;UBERON:0001899,4.31e-09,2;UBERON:0004121,1.45e-08,171;UBERON:0000924,1.45e-08,171;UBERON:0006601,1.45e-08,171;UBERON:0002346,4.68e-08,86;UBERON:0011216,4.16e-07,223;UBERON:0001049,8.20e-07,56;UBERON:0005068,8.20e-07,56;UBERON:0006241,8.20e-07,56;UBERON:0007135,8.20e-07,56 | |||
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|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,1.47745269692145,0.612002073732759,5.01527554364941,0,0.547497700291537,0.502170558379211,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.13441780596881,0.886917589850256,1.58102614247627,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0.35576626268671,0,0.805658634218294,0,1.46437234528902,0.367663080345869,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0.622422070799533,0.538842688278752,0,0.454072282934794,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.731842236777572,1.59035721985782,1.2781333715647,1.24393266018445,1.26160425437814,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,1.15930404975077,0,0.433099343283221,0.925971025153221,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0.448524337381443,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.27047312111232,2.60279707715243,1.54657762555539,1.84267891867784,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,2.15381273209015,1.37257369524342,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0.580024309752732,0.154048617114644,1.07452572308291,0,0.537101224341368,0.725083469571143,0.511359764496605,0.712256285173899,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.636406495851874,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,1.31717957183961,0,0.349934720244983,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0.36408156524854,0,0,0,0.296964680832639,0,0.994147647766298,0.562677665642051,0,0,0.211125408127993,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,1.11136990144637,0.969332746095218,0.463840490809256,3.99227596002388,0,0.174919999992391,0,0,0,0,1.72371686620732,0.291604613383254,0.520874984799877,0,0.844175070377856,0,0.552896299656123,2.36438095162838,0.219385397153973,0,0,0.769502585037971,0,0,0.269272933229316,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0.370691816839509,0.104421949505455,0.337005664903385,4.81546588379273,1.1713222286267,0,0,0,0.394584402849391,0,0.61214552326098,0.695052375913368,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0.640358984218058,0,0.144090417154106,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0.399358000997982,0.858452096273142,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,1.22583065500418,0.803765742325096,0.962776056180637,1.24632101408756,0,0,0.850493793212345,0,0.157611414598396,0.891727998294968,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,0.52893040697076,0,0,0.640724475406168,1.25763444079733,1.65695622138878,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,0.157054096250234,0.886068179966986,0.488105059607853,0.625954653532499,0.573409195690071,0.665574309221114,0.683060432355218,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,1.15104934173287,1.1860729253635,0,0.982886743728125,0.33946505990805,2.12574920101683,0.991486114072017,0,0,0.23658523500376,0,0,0,0.642292250964595,0,0.478901577171454,0.41023272848151,3.02486035466062,0.691572524642179,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,0.902523940191087,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.380494861163441,3.82882366312754,0,0.992422356778588,1.23109871051734,0,14.4639495687137,9.41594422212707,0.606965604236632,0.227662191351298,0.266107110487916,0,0,0.815636795721981,0.789273282754189,0,0,0.706437835654626,0.314231179832004,0,3.65263488203798,0,0,0.7147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| ||
|short_description=p@chr16:49891062..49891082,- | |short_description=p@chr16:49891062..49891082,- | ||
}} | }} |
Latest revision as of 09:22, 25 July 2015
Short description: | p@chr16:49891062..49891082, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:49891062..49891082, - |
Coexpression cluster: | C2377_pineal_occipital_peripheral_Astrocyte_parietal_skeletal_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.83e-16 | 8 |
neurectodermal cell | 6.88e-13 | 59 |
embryonic stem cell | 1.13e-11 | 5 |
neuron | 3.55e-10 | 6 |
neuroblast | 3.55e-10 | 6 |
electrically signaling cell | 3.55e-10 | 6 |
ectodermal cell | 6.30e-10 | 72 |
central nervous system pericyte | 1.87e-08 | 2 |
neurecto-epithelial cell | 1.00e-07 | 20 |
neural cell | 1.42e-07 | 25 |
columnar/cuboidal epithelial cell | 4.90e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.22e-12 | 89 |
central nervous system | 1.83e-11 | 81 |
pineal body | 4.31e-09 | 2 |
regional part of epithalamus | 4.31e-09 | 2 |
secretory circumventricular organ | 4.31e-09 | 2 |
circumventricular organ | 4.31e-09 | 2 |
epithalamus | 4.31e-09 | 2 |
ectoderm-derived structure | 1.45e-08 | 171 |
ectoderm | 1.45e-08 | 171 |
presumptive ectoderm | 1.45e-08 | 171 |
neurectoderm | 4.68e-08 | 86 |
organ system subdivision | 4.16e-07 | 223 |
neural tube | 8.20e-07 | 56 |
neural rod | 8.20e-07 | 56 |
future spinal cord | 8.20e-07 | 56 |
neural keel | 8.20e-07 | 56 |