FFCP PHASE1:Hg19::chr16:86546627..86546642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86546627..86546642,+ | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_at_chr16:86546627..86546642,+ | |description=CAGE_peak_at_chr16:86546627..86546642,+ | ||
|id=chr16:86546627..86546642,+ | |id=chr16:86546627..86546642,+ | ||
|ontology_enrichment_celltype=CL:0000192!2.87e-14!42;CL:0000514!2.87e-14!42;CL:0000055!9.82e-11!180;CL:0000187!2.35e-10!54;CL:0000183!1.69e-09!59;CL:0000680!2.63e-09!57;CL:0000056!2.63e-09!57;CL:0000355!2.63e-09!57;CL:0000057!2.08e-08!75;CL:0000393!2.23e-08!60;CL:0000211!2.23e-08!60;CL:0000222!6.83e-08!119;CL:0000359!5.10e-07!32;CL:0002556!9.55e-07!6 | |ontology_enrichment_celltype=CL:0000192!2.87e-14!42;CL:0000514!2.87e-14!42;CL:0000055!9.82e-11!180;CL:0000187!2.35e-10!54;CL:0000183!1.69e-09!59;CL:0000680!2.63e-09!57;CL:0000056!2.63e-09!57;CL:0000355!2.63e-09!57;CL:0000057!2.08e-08!75;CL:0000393!2.23e-08!60;CL:0000211!2.23e-08!60;CL:0000222!6.83e-08!119;CL:0000359!5.10e-07!32;CL:0002556!9.55e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002622;3.91e-11;3!CL:0002552;1.02e-10;5!CL:0002504;2.51e-10;3!CL:1000279;2.51e-10;3!CL:1000280;2.51e-10;3!CL:0002556;3.67e-08;6!CL:0002195;9.53e-08;2!CL:0002571;9.53e-08;2!CL:1000487;2.41e-07;2!CL:0000192;3.13e-07;43!CL:0002367;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,3.81e-11,3;CL:0000192,4.26e-11,43;CL:0000514,4.26e-11,43;CL:0002552,9.06e-11,5;CL:0002504,1.73e-10,3;CL:1000279,1.73e-10,3;CL:1000280,1.73e-10,3;CL:0002556,3.38e-08,6;CL:0000187,5.65e-08,55;CL:0002195,8.98e-08,2;CL:0002571,8.98e-08,2;CL:0000680,2.11e-07,58;CL:0000056,2.11e-07,58;CL:0000355,2.11e-07,58;CL:1000487,2.42e-07,2;CL:0000393,6.89e-07,61;CL:0000211,6.89e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.13e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.06e-15!347;UBERON:0000475!3.70e-12!365;UBERON:0000914!2.53e-11!83;UBERON:0002329!2.53e-11!83;UBERON:0003077!2.53e-11!83;UBERON:0003059!2.53e-11!83;UBERON:0007282!2.53e-11!83;UBERON:0009618!2.53e-11!83;UBERON:0007285!2.53e-11!83;UBERON:0005256!8.60e-11!143;UBERON:0000477!9.27e-11!286;UBERON:0001007!1.90e-09!155;UBERON:0001555!1.90e-09!155;UBERON:0007026!1.90e-09!155;UBERON:0001135!3.81e-09!15;UBERON:0002385!3.83e-09!63;UBERON:0001015!3.83e-09!63;UBERON:0000383!3.83e-09!63;UBERON:0004119!1.33e-08!169;UBERON:0000925!1.33e-08!169;UBERON:0006595!1.33e-08!169;UBERON:0003104!1.41e-08!238;UBERON:0009142!1.41e-08!238;UBERON:0001134!4.30e-08!61;UBERON:0002036!4.30e-08!61;UBERON:0003082!4.30e-08!61;UBERON:0002100!5.53e-08!216;UBERON:0004290!8.33e-08!70;UBERON:0000468!1.53e-07!659;UBERON:0000467!8.64e-07!625;UBERON:0001758!9.55e-07!6;UBERON:0003672!9.55e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;2.44e-12;15!UBERON:0002367;3.59e-10;11!UBERON:0010147;3.59e-10;11!UBERON:0003937;2.94e-09;12!UBERON:0005399;2.94e-09;12!UBERON:0001555;1.47e-08;54!UBERON:0001758;3.67e-08;6!UBERON:0003672;3.67e-08;6!UBERON:0000075;4.04e-08;16!UBERON:0000160;8.59e-08;17!UBERON:0000077;8.78e-08;27!UBERON:0005409;1.61e-07;22!UBERON:0003129;5.36e-07;7!UBERON:0005969;9.01e-07;2!UBERON:0003956;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.16e-18,145;UBERON:0001555,3.16e-18,145;UBERON:0007026,3.16e-18,145;UBERON:0004119,1.12e-15,160;UBERON:0000925,1.12e-15,160;UBERON:0006595,1.12e-15,160;UBERON:0000162,2.99e-13,14;UBERON:0001353,2.99e-13,14;UBERON:0000163,2.99e-13,14;UBERON:0006866,2.99e-13,14;UBERON:0000164,2.99e-13,14;UBERON:0000931,2.99e-13,14;UBERON:0001135,1.93e-12,15;UBERON:0004122,2.86e-12,15;UBERON:0000161,5.90e-12,36;UBERON:0005256,1.39e-11,122;UBERON:0004921,7.87e-11,118;UBERON:0003104,1.75e-10,160;UBERON:0009142,1.75e-10,160;UBERON:0002367,4.81e-10,11;UBERON:0010147,4.81e-10,11;UBERON:0009846,4.81e-10,11;UBERON:0003353,4.81e-10,11;UBERON:0004902,4.81e-10,11;UBERON:0003820,4.81e-10,11;UBERON:0009847,4.81e-10,11;UBERON:0001046,2.20e-09,19;UBERON:0003937,3.83e-09,12;UBERON:0005399,3.83e-09,12;UBERON:0000490,1.80e-08,148;UBERON:0011216,2.09e-08,223;UBERON:0003102,2.30e-08,99;UBERON:0001758,3.38e-08,6;UBERON:0003672,3.38e-08,6;UBERON:0000075,4.47e-08,16;UBERON:0000160,8.50e-08,17;UBERON:0002385,1.50e-07,64;UBERON:0001015,1.50e-07,64;UBERON:0000383,1.50e-07,64;UBERON:0007524,3.94e-07,73;UBERON:0000077,4.19e-07,29;UBERON:0002100,4.35e-07,199;UBERON:0000165,4.48e-07,29;UBERON:0000930,4.48e-07,29;UBERON:0011137,4.58e-07,14;UBERON:0003129,5.00e-07,7;UBERON:0003929,6.23e-07,54;UBERON:0001134,9.95e-07,62;UBERON:0002036,9.95e-07,62;UBERON:0003082,9.95e-07,62 | |||
|phase1_expression=0,0.856402095563933,0,0,1.78784437770915,0,0,0,0.261185628199839,1.47440361900905,0,0,0,1.11389717664042,0.331397375727916,4.03395087871065,3.61616716814386,1.46062018077475,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0.323745888736263,0.280901613404497,0.816616685019573,2.21101771161182,1.65321249881225,9.50402285825643,6.18167323196392,0,2.87447256726495,1.5150250255866,2.75260743718321,0.277064115484183,0.877955241761676,1.83892677479412,1.05166641234618,0,0,0.213557388818567,0.635795703478686,0.300091096084402,1.23663035086127,0,0.18611685633159,0,0,0,0.368199594569197,1.2931684545505,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0,0.392442930250692,0,0,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0.231860809950154,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,3.43147184779554,1.08524321078289,0,0,4.97548728239564,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,0,0.831883446123229,0.713715955188647,0.788512075169673,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,1.23367755042124,0.177561725313127,0.328508624055237,4.67328986265259,0.116210378459959,0,0,0,6.08516575272416,10.3791965763829,6.81846957789005,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0.762520775695299,0.511795582622668,0.42793898803392,0.318203247925937,2.35484592059769,1.79872457583315,5.76527762445715,3.18093486333353,0.202182481573316,0,1.68503382495592,1.95053495635836,0.731140468893853,2.11300293513511,1.50149902548784,6.08043357400965,0,0,0.66343897524122,0.876901770507525,2.31510213706675,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0.294747123039363,0,0.709522128141196,0.422215270595328,0,1.13841952129715,1.39973888097993,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,1.73856760253663,0,0,0,0,0,1.97286811273867,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0.21787692703798,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,2.4441205797345,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.580537987734511,0.146178634172371,0.0821154570532092,0.775912131907355,0,0.225980740780532,0,0,0,0,0,1.70762395791482,1.19885765749278,0,0,0,0,0,0,0,0.104602846312333,1.93796613509011,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,2.5926644736038,2.28611152076586,0,0,0,0.906496732161005,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,1.06787412567695,0.943225830597996,2.07119527673598,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,4.23478475456709,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.450772826991655,2.66563648518157,0,0.545545977607678,0.107410557042488,0,0.796191777397232,0,0,0,0,0.385239660814607,0,1.30497145982606,0,0,0.97894681802587,0,0,0.657852148736121,0.353378291891762,0,0,0.256241518587947,0,1.51929978088691,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,39.1994211012096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0.171488009437418,0.0679697329768317,0,0,0,1.02041020705668,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0,0,0.385870790539723,1.09279780251979,0,3.18692818280077,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286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| ||
|short_description=p@chr16:86546627..86546642,+ | |short_description=p@chr16:86546627..86546642,+ | ||
}} | }} |
Latest revision as of 13:06, 25 July 2015
Short description: | p@chr16:86546627..86546642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86546627..86546642, + |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 3.81e-11 | 3 |
smooth muscle cell | 4.26e-11 | 43 |
smooth muscle myoblast | 4.26e-11 | 43 |
fibroblast of gingiva | 9.06e-11 | 5 |
enteric smooth muscle cell | 1.73e-10 | 3 |
smooth muscle cell of large intestine | 1.73e-10 | 3 |
smooth muscle cell of colon | 1.73e-10 | 3 |
fibroblast of periodontium | 3.38e-08 | 6 |
muscle cell | 5.65e-08 | 55 |
hepatic stem cell | 8.98e-08 | 2 |
hepatic mesenchymal stem cell | 8.98e-08 | 2 |
muscle precursor cell | 2.11e-07 | 58 |
myoblast | 2.11e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.11e-07 | 58 |
smooth muscle cell of prostate | 2.42e-07 | 2 |
electrically responsive cell | 6.89e-07 | 61 |
electrically active cell | 6.89e-07 | 61 |