FFCP PHASE1:Hg19::chr17:39911909..39911929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39911909..39911929,- | |||
|description=CAGE_peak_at_chr17:39911909..39911929,- | |description=CAGE_peak_at_chr17:39911909..39911929,- | ||
|id=chr17:39911909..39911929,- | |id=chr17:39911909..39911929,- | ||
|ontology_enrichment_celltype=CL:0000066!7.17e-23!254;CL:0002076!3.41e-09!43;CL:0002251!3.42e-08!21;CL:0000223!2.19e-07!59 | |ontology_enrichment_celltype=CL:0000066!7.17e-23!254;CL:0002076!3.41e-09!43;CL:0002251!3.42e-08!21;CL:0000223!2.19e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002231;5.28e-21;3!CL:0000244;2.32e-15;4!CL:0000731;2.32e-15;4!CL:0000317;2.90e-14;2!CL:1000448;2.90e-14;2!CL:0002308;2.90e-14;2!CL:0002140;2.90e-14;2!CL:0002159;1.31e-11;14!CL:0002076;3.16e-10;42!CL:0002144;1.03e-09;3!CL:0002621;1.78e-09;3!CL:0002252;4.34e-08;1!CL:0000362;2.92e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,5.31e-21,3;CL:0000244,2.33e-15,4;CL:0000731,2.33e-15,4;CL:0000317,3.92e-14,2;CL:1000448,3.92e-14,2;CL:0002308,3.92e-14,2;CL:0002140,3.92e-14,2;CL:0002159,1.03e-11,14;CL:0000066,2.86e-11,253;CL:0002076,4.78e-11,42;CL:0002144,7.47e-10,3;CL:0002621,1.94e-09,3;CL:0002252,4.66e-08,1;CL:0000223,1.31e-07,58;CL:0000362,3.22e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.00e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.00e-07;1!DOID:3149;1.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.33e-08,1;DOID:3149,5.33e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.73e-15!169;UBERON:0000925!4.73e-15!169;UBERON:0006595!4.73e-15!169;UBERON:0006554!4.12e-13!44;UBERON:0001008!1.29e-12!45;UBERON:0000161!5.87e-11!35;UBERON:0001007!1.25e-10!155;UBERON:0001555!1.25e-10!155;UBERON:0007026!1.25e-10!155;UBERON:0003064!1.29e-09!37;UBERON:0000077!8.21e-09!130;UBERON:0000162!1.07e-08!14;UBERON:0001353!1.07e-08!14;UBERON:0000163!1.07e-08!14;UBERON:0006866!1.07e-08!14;UBERON:0000164!1.07e-08!14;UBERON:0000931!1.07e-08!14;UBERON:0004921!1.09e-08!129;UBERON:0004185!1.09e-08!129;UBERON:0002367!1.82e-08!11;UBERON:0010147!1.82e-08!11;UBERON:0009846!1.82e-08!11;UBERON:0003353!1.82e-08!11;UBERON:0004902!1.82e-08!11;UBERON:0003820!1.82e-08!11;UBERON:0009847!1.82e-08!11;UBERON:0005911!3.61e-08!82;UBERON:0004122!6.70e-08!15;UBERON:0003937!1.53e-07!12;UBERON:0005399!1.53e-07!12;UBERON:0003101!2.02e-07!22;UBERON:0000079!2.02e-07!22;UBERON:0005153!6.74e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.90e-14;2!UBERON:0007771;2.90e-14;2!UBERON:0003297;2.90e-14;2!UBERON:0001821;2.90e-14;2!UBERON:0003487;2.90e-14;2!UBERON:0001820;2.90e-14;2!UBERON:0000486;2.29e-13;12!UBERON:0000365;2.14e-12;5!UBERON:0005910;2.05e-10;6!UBERON:0001043;1.03e-09;3!UBERON:0010523;1.03e-09;3!UBERON:0001915;1.03e-09;3!UBERON:0001982;1.03e-09;3!UBERON:0001949;1.78e-09;3!UBERON:0004913;1.00e-07;1!UBERON:0003703;1.00e-07;1!UBERON:0001174;1.00e-07;1!UBERON:0004914;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,3.92e-14,2;UBERON:0007771,3.92e-14,2;UBERON:0003297,3.92e-14,2;UBERON:0001821,3.92e-14,2;UBERON:0003487,3.92e-14,2;UBERON:0001820,3.92e-14,2;UBERON:0005089,3.92e-14,2;UBERON:0005088,3.92e-14,2;UBERON:0000365,2.15e-12,5;UBERON:0005910,2.06e-10,6;UBERON:0006554,6.08e-10,47;UBERON:0010523,7.47e-10,3;UBERON:0001915,7.47e-10,3;UBERON:0001982,7.47e-10,3;UBERON:0001043,9.30e-10,3;UBERON:0009143,9.30e-10,3;UBERON:0001008,1.05e-09,48;UBERON:0001949,1.94e-09,3;UBERON:0004913,1.18e-07,1;UBERON:0003703,1.18e-07,1;UBERON:0001174,1.18e-07,1;UBERON:0004914,1.18e-07,1;UBERON:0003102,2.68e-07,99 | |||
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| ||
|short_description=p@chr17:39911909..39911929,- | |short_description=p@chr17:39911909..39911929,- | ||
}} | }} |
Latest revision as of 16:48, 25 July 2015
Short description: | p@chr17:39911909..39911929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39911909..39911929, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 5.31e-21 | 3 |
transitional epithelial cell | 2.33e-15 | 4 |
urothelial cell | 2.33e-15 | 4 |
sebum secreting cell | 3.92e-14 | 2 |
epithelial cell of sweat gland | 3.92e-14 | 2 |
epithelial cell of skin gland | 3.92e-14 | 2 |
acinar cell of sebaceous gland | 3.92e-14 | 2 |
general ecto-epithelial cell | 1.03e-11 | 14 |
epithelial cell | 2.86e-11 | 253 |
endo-epithelial cell | 4.78e-11 | 42 |
capillary endothelial cell | 7.47e-10 | 3 |
gingival epithelial cell | 1.94e-09 | 3 |
epithelial cell of esophagus | 4.66e-08 | 1 |
endodermal cell | 1.31e-07 | 58 |
epidermal cell | 3.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 3.92e-14 | 2 |
epidermis gland | 3.92e-14 | 2 |
gland of integumental system | 3.92e-14 | 2 |
sebaceous gland | 3.92e-14 | 2 |
skin sebaceous gland | 3.92e-14 | 2 |
sweat gland | 3.92e-14 | 2 |
sweat gland placode | 3.92e-14 | 2 |
sebaceous gland placode | 3.92e-14 | 2 |
urothelium | 2.15e-12 | 5 |
transitional epithelium | 2.06e-10 | 6 |
urinary system structure | 6.08e-10 | 47 |
microcirculatory vessel | 7.47e-10 | 3 |
endothelium of capillary | 7.47e-10 | 3 |
capillary | 7.47e-10 | 3 |
esophagus | 9.30e-10 | 3 |
esophageal region | 9.30e-10 | 3 |
renal system | 1.05e-09 | 48 |
gingival epithelium | 1.94e-09 | 3 |
hepatopancreatic ampulla | 1.18e-07 | 1 |
extrahepatic bile duct | 1.18e-07 | 1 |
common bile duct | 1.18e-07 | 1 |
duodenal papilla | 1.18e-07 | 1 |
surface structure | 2.68e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.33e-08 | 1 |
keratoacanthoma | 5.33e-08 | 1 |