FFCP PHASE1:Hg19::chr17:48264096..48264115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48264096..48264115,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr17:48264096..48264115,+ | |description=CAGE_peak_at_chr17:48264096..48264115,+ | ||
|id=chr17:48264096..48264115,+ | |id=chr17:48264096..48264115,+ | ||
|ontology_enrichment_celltype=CL:0002569;5.89e-09;6!CL:0000134;6.42e-09;55!CL:0000057;1.09e-08;73!CL:0000135;3.90e-08;3!CL:0000388;3.90e-08;3!CL:0002620;6.49e-08;23!CL:0000048;1.43e-07;58!CL:0002334;1.88e-07;12!CL:0000349;2.39e-07;19!CL:0002580;3.59e-07;3!CL:0002615;6.09e-07;3 | |ontology_enrichment_celltype=CL:0000055!2.51e-27!180;CL:0000057!1.17e-25!75;CL:0000048!6.93e-14!430;CL:0000723!4.10e-13!436;CL:0000034!1.79e-12!444;CL:0000144!5.45e-11!625;CL:0002371!8.44e-11!591;CL:0002320!7.07e-10!365;CL:0002620!3.32e-09!23;CL:0000183!2.48e-08!59;CL:0000134!6.42e-08!358;CL:0000187!2.31e-07!54;CL:0000680!3.31e-07!57;CL:0000056!3.31e-07!57;CL:0000355!3.31e-07!57;CL:0002569!5.93e-07!6;CL:0000499!7.19e-07!27;CL:0000393!7.23e-07!60;CL:0000211!7.23e-07!60 | ||
| | |ontology_enrichment_celltype_v019=CL:0002569;5.89e-09;6!CL:0000134;6.42e-09;55!CL:0000057;1.09e-08;73!CL:0000135;3.90e-08;3!CL:0000388;3.90e-08;3!CL:0002620;6.49e-08;23!CL:0000048;1.43e-07;58!CL:0002334;1.88e-07;12!CL:0000349;2.39e-07;19!CL:0002580;3.59e-07;3!CL:0002615;6.09e-07;3 | ||
|ontology_enrichment_disease=DOID:17;9.69e-07;5!DOID:450;9.69e-07;5!DOID:66;9.69e-07;5!DOID:423;9.69e-07;5!DOID:0080000;9.69e-07;5!DOID:11722;9.69e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0000057,2.80e-24,76;CL:0000048,6.28e-14,427;CL:0000723,1.90e-13,433;CL:0002320,2.02e-13,361;CL:0000034,7.93e-13,441;CL:0000134,1.14e-12,354;CL:0000219,5.41e-10,386;CL:0002569,3.59e-09,6;CL:0000135,3.99e-08,3;CL:0000388,3.99e-08,3;CL:0002620,9.65e-08,23;CL:0002334,1.37e-07,12;CL:0000349,1.40e-07,19;CL:0002580,2.54e-07,3;CL:0002615,8.08e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0003104;7.36e-11;7!UBERON:0009142;7.36e-11;7!UBERON:0004457;3.65e-10;9!UBERON:0000042;3.65e-10;9!UBERON:0003422;5.89e-09;6!UBERON:0003688;1.33e-08;6!UBERON:0002358;1.33e-08;6!UBERON:0003684;1.33e-08;6!UBERON:0001178;1.33e-08;6!UBERON:0007846;3.90e-08;3!UBERON:0000043;3.90e-08;3!UBERON:0007845;3.90e-08;3!UBERON:0002384;9.76e-08;198!UBERON:0002331;2.10e-07;10!UBERON:0000478;6.85e-07;24 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.69e-07;5!DOID:450;9.69e-07;5!DOID:66;9.69e-07;5!DOID:423;9.69e-07;5!DOID:0080000;9.69e-07;5!DOID:11722;9.69e-07;5 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.64e-10!375;UBERON:0000914!7.51e-08!83;UBERON:0002329!7.51e-08!83;UBERON:0003077!7.51e-08!83;UBERON:0003059!7.51e-08!83;UBERON:0007282!7.51e-08!83;UBERON:0009618!7.51e-08!83;UBERON:0007285!7.51e-08!83;UBERON:0003422!5.93e-07!6;UBERON:0001134!8.06e-07!61;UBERON:0002036!8.06e-07!61;UBERON:0003082!8.06e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;7.36e-11;7!UBERON:0009142;7.36e-11;7!UBERON:0004457;3.65e-10;9!UBERON:0000042;3.65e-10;9!UBERON:0003422;5.89e-09;6!UBERON:0003688;1.33e-08;6!UBERON:0002358;1.33e-08;6!UBERON:0003684;1.33e-08;6!UBERON:0001178;1.33e-08;6!UBERON:0007846;3.90e-08;3!UBERON:0000043;3.90e-08;3!UBERON:0007845;3.90e-08;3!UBERON:0002384;9.76e-08;198!UBERON:0002331;2.10e-07;10!UBERON:0000478;6.85e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.44e-13,371;UBERON:0003422,3.59e-09,6;UBERON:0003688,1.59e-08,6;UBERON:0002358,1.59e-08,6;UBERON:0003684,1.59e-08,6;UBERON:0001178,1.59e-08,6;UBERON:0007846,3.99e-08,3;UBERON:0000043,3.99e-08,3;UBERON:0007845,3.99e-08,3;UBERON:0002331,1.51e-07,10;UBERON:0000358,1.51e-07,10;UBERON:0000307,1.51e-07,10;UBERON:0000091,1.51e-07,10;UBERON:0000087,1.51e-07,10;UBERON:0007010,1.51e-07,10;UBERON:0007806,1.51e-07,10;UBERON:0008780,1.51e-07,10;UBERON:0005728,1.51e-07,10;UBERON:0004457,2.90e-07,12;UBERON:0000042,2.90e-07,12;UBERON:0000478,4.37e-07,24 | |||
|phase1_expression=1.2717486548939,0.642301571672949,1.12763523276777,3.00219895059391,2.68176656656373,3.48935409640147,0,0,0.261185628199839,0,1.39560233594486,0.218441372130172,1.58260186937072,0.990130823680373,0.331397375727916,0,0.602694528023977,0,0.975865597581014,0,0.816002764977012,0.940364164434263,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,3.58015173161885,2.1686349143074,0,2.462390822334,0,0.973269740605272,0.567208902984407,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,1.01304409331664,1.05927344650575,3.72887606973458,0.354668382198357,0.560677600142307,2.1349799145941,4.19334832309172,0,0.269421344139376,0.490385709340376,0.454072282934794,1.72852777344,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0,0.491337269247072,0.206651562351531,1.18800285728205,5.19260551484969,0.910161361938026,2.15585442544872,0,0.250237039743928,0,0.877955241761676,3.67785354958824,1.20190447125277,1.47461838108027,1.61450672119976,2.77624605464138,1.05965950579781,3.00091096084402,0.412210116953756,2.06112432036503,1.67505170698431,1.18143432568886,0.584622030967192,1.7670364197088,1.10459878370759,0.80823028409406,1.06502877754984,0.806016785821122,1.01736355386293,0,0,0,0,0,0.116193942869518,0,0,0,0,3.21620469096443,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.2933531432838,0.517086863031111,7.15312891703765,0,1.86156681609409,0,0.514414748524284,0,0.532844358032199,4.14636181608628,5.96883765930587,1.64648067356154,1.95441710576241,7.10783897485092,3.95975936466715,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,2.87549826589899,2.29723871668228,0,0.723906533337896,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,12.6862225533792,11.5978842718155,6.46579901639132,0.937131319941706,0,0,1.03473071292505,1.99267679560631,0.368738337083406,0.521301686808497,2.34961388955289,2.05886054286514,0,0,0,0,4.99306318531491,2.41912234663744,1.73675465473144,3.37616341233737,4.49056151092918,1.40953064181271,0,3.86049410744658,0,0.308419387605311,1.9531789784444,0.246381468041427,0,1.16210378459959,0,0,0,0.918515585316854,1.63882051206045,0.524497659837696,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.330037999682352,0,0,1.6068392984416,0,0.462145851343933,0.15350367472613,0.413509717453592,0.214840489736547,0.870100163485371,0.255679882248303,3.20515328328254,0.165284915360978,0,0,0,0.464845549297286,3.77774816196768,0,0,0,0,0.18532421910392,0,0,0.316379424718726,1.33441135746677,0.511795582622668,0,0.318203247925937,0.78494864019923,0.719489830333259,2.19629623788844,0.471249609382746,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.272999822815972,1.55545975149084,0,1.10273068709225,0,0,0,1.9676842561399,0,0,0,1.00387946542836,2.94747123039363,0,0,1.47775344708365,1.31717957183961,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0.429226048136571,0,0.403100834920358,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,2.57084640831947,0.554805861502613,0,0.50313580350515,1.77962244319307,0.228840068396924,1.66354016139563,0.932623203496683,0.147855149989634,0.318593534327405,0.449803112163605,1.55262956876259,2.07353103920428,1.86089200190596,2.08698024724694,2.55437935295271,0.761610424337591,0,0.363697318405119,0.859284456339908,0,1.59238355479446,0,1.37358282073117,0.673498977531838,0,0,0,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,3.87943538059752,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0.397832444232549,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr17:48264096..48264115,+ | |short_description=p@chr17:48264096..48264115,+ | ||
}} | }} |
Latest revision as of 18:32, 25 July 2015
Short description: | p@chr17:48264096..48264115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48264096..48264115, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.80e-24 | 76 |
multi fate stem cell | 6.28e-14 | 427 |
somatic stem cell | 1.90e-13 | 433 |
connective tissue cell | 2.02e-13 | 361 |
stem cell | 7.93e-13 | 441 |
mesenchymal cell | 1.14e-12 | 354 |
motile cell | 5.41e-10 | 386 |
mesenchymal stem cell of umbilical cord | 3.59e-09 | 6 |
fibrocyte | 3.99e-08 | 3 |
tendon cell | 3.99e-08 | 3 |
skin fibroblast | 9.65e-08 | 23 |
preadipocyte | 1.37e-07 | 12 |
extraembryonic cell | 1.40e-07 | 19 |
preadipocyte of the breast | 2.54e-07 | 3 |
adipocyte of omentum tissue | 8.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.44e-13 | 371 |
mesenchyme of umbilical cord | 3.59e-09 | 6 |
omentum | 1.59e-08 | 6 |
peritoneum | 1.59e-08 | 6 |
abdominal cavity | 1.59e-08 | 6 |
visceral peritoneum | 1.59e-08 | 6 |
dense regular connective tissue | 3.99e-08 | 3 |
tendon | 3.99e-08 | 3 |
regular connective tissue | 3.99e-08 | 3 |
umbilical cord | 1.51e-07 | 10 |
blastocyst | 1.51e-07 | 10 |
blastula | 1.51e-07 | 10 |
bilaminar disc | 1.51e-07 | 10 |
inner cell mass | 1.51e-07 | 10 |
cleaving embryo | 1.51e-07 | 10 |
connecting stalk | 1.51e-07 | 10 |
inner cell mass derived epiblast | 1.51e-07 | 10 |
extraembryonic mesoderm | 1.51e-07 | 10 |
cavity lining | 2.90e-07 | 12 |
serous membrane | 2.90e-07 | 12 |
extraembryonic structure | 4.37e-07 | 24 |