FFCP PHASE1:Hg19::chr17:60757353..60757384,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:60757353..60757384,+ to FFCP PHASE1:Hg19::chr17:60757353..60757384,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:60757353..60757384,+ | |||
|description=CAGE_peak_at_chr17:60757353..60757384,+ | |||
|id=chr17:60757353..60757384,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.17e-20!5;CL:0002150!5.83e-14!3;CL:0000861!5.83e-14!3;CL:0002535!4.85e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;5.86e-20;2!CL:0002322;1.70e-16;5!CL:0002252;3.45e-10;1!CL:0002563;5.21e-10;4!CL:0002251;1.89e-07;20!CL:0002076;3.43e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.87e-20,2;CL:0002322,1.49e-16,5;CL:0002252,3.29e-10,1;CL:0002563,5.46e-10,4;CL:0000066,8.92e-09,253;CL:0002251,1.97e-07,20;CL:0002076,2.46e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.11e-14;10!UBERON:0005564;1.11e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.57e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.50e-10,106;DOID:4362,1.57e-08,5;DOID:0050687,2.61e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.79e-13!11;UBERON:0000473!3.78e-13!8;UBERON:0006955!4.85e-10!2;UBERON:0004801!4.85e-10!2;UBERON:0003133!5.39e-10!48;UBERON:0005156!3.78e-09!59;UBERON:0000990!3.78e-09!59;UBERON:0003101!1.71e-08!22;UBERON:0000079!1.71e-08!22;UBERON:0002298!8.05e-08!8;UBERON:0000002!6.09e-07!6;UBERON:0001560!6.09e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.86e-20;2!UBERON:0004801;5.86e-20;2!UBERON:0000473;2.75e-18;8!UBERON:0003135;2.28e-13;11!UBERON:0003101;3.54e-10;22!UBERON:0000079;3.54e-10;22!UBERON:0001242;5.21e-10;4!UBERON:0001262;5.21e-10;4!UBERON:0004786;5.21e-10;4!UBERON:0004808;5.21e-10;4!UBERON:0001277;5.21e-10;4!UBERON:0000002;3.04e-07;6!UBERON:0001560;3.04e-07;6!UBERON:0000991;4.39e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.87e-20,2;UBERON:0004801,5.87e-20,2;UBERON:0000473,3.01e-18,8;UBERON:0003135,2.43e-13,11;UBERON:0003101,3.72e-10,22;UBERON:0000079,3.72e-10,22;UBERON:0001242,5.46e-10,4;UBERON:0001262,5.46e-10,4;UBERON:0004786,5.46e-10,4;UBERON:0004808,5.46e-10,4;UBERON:0001277,5.46e-10,4;UBERON:0000002,3.04e-07,6;UBERON:0001560,3.04e-07,6;UBERON:0000991,4.54e-07,21;UBERON:0009196,4.54e-07,21;UBERON:0009117,4.54e-07,21;UBERON:0005564,4.54e-07,21;UBERON:0005156,7.21e-07,59;UBERON:0000990,7.21e-07,59;UBERON:0004176,9.39e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.265059536642971,1.62671520017326,0.518305275076852,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82873408649161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,3.02148623979056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,13.4941770199624,0,0,4.45079123929792,4.09300175682639,4.84481196613934,0,0,0,0,0,0,11.7330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,4.02415957822496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.61193297845189,1.06886962106224,0,5.51556586443225,1.21245917149183,2.94760543171796,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,4.1623664892309,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.265059536642971,1.62671520017326,0.518305275076852,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82873408649161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,3.02148623979056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,13.4941770199624,0,0,4.45079123929792,4.09300175682639,4.84481196613934,0,0,0,0,0,0,11.7330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,4.02415957822496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.61193297845189,1.06886962106224,0,5.51556586443225,1.21245917149183,2.94760543171796,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,4.1623664892309,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:60757353..60757384,+ | |||
}} | }} |
Latest revision as of 19:39, 25 July 2015
Short description: | p@chr17:60757353..60757384, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:60757353..60757384, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.87e-20 | 2 |
embryonic stem cell | 1.49e-16 | 5 |
epithelial cell of esophagus | 3.29e-10 | 1 |
intestinal epithelial cell | 5.46e-10 | 4 |
epithelial cell | 8.92e-09 | 253 |
epithelial cell of alimentary canal | 1.97e-07 | 20 |
endo-epithelial cell | 2.46e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.87e-20 | 2 |
cervix epithelium | 5.87e-20 | 2 |
testis | 3.01e-18 | 8 |
male reproductive organ | 2.43e-13 | 11 |
male organism | 3.72e-10 | 22 |
male reproductive system | 3.72e-10 | 22 |
intestinal mucosa | 5.46e-10 | 4 |
wall of intestine | 5.46e-10 | 4 |
gastrointestinal system mucosa | 5.46e-10 | 4 |
gastrointestinal system epithelium | 5.46e-10 | 4 |
intestinal epithelium | 5.46e-10 | 4 |
uterine cervix | 3.04e-07 | 6 |
neck of organ | 3.04e-07 | 6 |
gonad | 4.54e-07 | 21 |
indifferent external genitalia | 4.54e-07 | 21 |
indifferent gonad | 4.54e-07 | 21 |
gonad primordium | 4.54e-07 | 21 |
reproductive structure | 7.21e-07 | 59 |
reproductive system | 7.21e-07 | 59 |
external genitalia | 9.39e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.50e-10 | 106 |
cervical cancer | 1.57e-08 | 5 |
cell type cancer | 2.61e-07 | 143 |