FFCP PHASE1:Hg19::chr17:67875049..67875058,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:67875049..67875058,+ | |||
|description=CAGE_peak_at_chr17:67875049..67875058,+ | |||
|id=chr17:67875049..67875058,+ | |||
|ontology_enrichment_celltype=CL:0000359!8.24e-25!32;CL:0000187!2.13e-22!54;CL:0000680!6.66e-21!57;CL:0000056!6.66e-21!57;CL:0000355!6.66e-21!57;CL:0000192!4.81e-20!42;CL:0000514!4.81e-20!42;CL:0000183!5.42e-20!59;CL:0000393!1.47e-19!60;CL:0000211!1.47e-19!60;CL:0000055!1.96e-17!180;CL:0002539!2.03e-14!10;CL:0002551!2.58e-12!6;CL:0000222!4.07e-12!119;CL:0002621!7.77e-11!3;CL:0002592!1.25e-10!3;CL:0002582!2.88e-09!3;CL:0000057!5.34e-08!75;CL:0002589!7.14e-08!2;CL:0002371!8.08e-08!591;CL:0002556!8.68e-08!6;CL:0000220!2.58e-07!246;CL:0000144!3.44e-07!625;CL:0002321!3.44e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002621;5.07e-27;3!CL:0002592;1.33e-26;3!CL:0000359;5.04e-24;32!CL:0002589;5.87e-19;2!CL:0002595;1.34e-16;5!CL:0000192;2.26e-15;43!CL:1000413;4.70e-09;9!CL:0002494;5.86e-09;16!CL:0000187;2.16e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.89e-27,3;CL:0002592,1.46e-26,3;CL:0000359,6.93e-26,32;CL:0002589,5.88e-19,2;CL:0000192,6.98e-19,43;CL:0000514,6.98e-19,43;CL:0002595,1.12e-16,5;CL:0000187,1.97e-14,55;CL:0000680,1.32e-13,58;CL:0000056,1.32e-13,58;CL:0000355,1.32e-13,58;CL:0000393,7.34e-13,61;CL:0000211,7.34e-13,61;CL:0000222,5.51e-10,121;CL:0002321,2.11e-09,250;CL:1000413,3.71e-09,9;CL:0002494,6.11e-09,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.26e-15;43!CL:0000355;2.00e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;7.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.82e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.12e-31!83;UBERON:0002329!1.12e-31!83;UBERON:0003077!1.12e-31!83;UBERON:0003059!1.12e-31!83;UBERON:0007282!1.12e-31!83;UBERON:0009618!1.12e-31!83;UBERON:0007285!1.12e-31!83;UBERON:0001637!4.52e-31!42;UBERON:0003509!4.52e-31!42;UBERON:0004572!4.52e-31!42;UBERON:0004573!3.85e-30!33;UBERON:0004571!3.85e-30!33;UBERON:0000486!1.82e-26!82;UBERON:0004290!3.13e-25!70;UBERON:0001981!6.43e-20!60;UBERON:0007500!6.43e-20!60;UBERON:0004537!6.43e-20!60;UBERON:0006965!6.43e-20!60;UBERON:0001134!3.84e-19!61;UBERON:0002036!3.84e-19!61;UBERON:0003082!3.84e-19!61;UBERON:0002385!2.40e-18!63;UBERON:0001015!2.40e-18!63;UBERON:0000383!2.40e-18!63;UBERON:0000055!2.70e-18!69;UBERON:0002049!9.75e-17!79;UBERON:0007798!9.75e-17!79;UBERON:0004872!1.72e-15!84;UBERON:0005256!9.79e-15!143;UBERON:0004237!2.03e-14!10;UBERON:0004695!2.03e-14!10;UBERON:0002111!2.03e-14!10;UBERON:0004178!2.03e-14!10;UBERON:0001828!2.44e-13!8;UBERON:0000947!1.09e-12!21;UBERON:0010191!1.09e-12!21;UBERON:0004535!1.34e-12!110;UBERON:0001009!4.35e-12!113;UBERON:0001949!7.77e-11!3;UBERON:0001621!1.25e-10!3;UBERON:0000490!1.65e-09!138;UBERON:0003914!2.90e-09!118;UBERON:0001135!3.03e-09!15;UBERON:0002100!3.82e-09!216;UBERON:0003129!5.44e-09!11;UBERON:0002204!9.92e-09!167;UBERON:0000165!1.16e-08!28;UBERON:0000930!1.16e-08!28;UBERON:0002067!4.27e-08!9;UBERON:0004016!4.27e-08!9;UBERON:0010083!4.27e-08!9;UBERON:0001529!7.14e-08!2;UBERON:0007204!7.14e-08!2;UBERON:0001758!8.68e-08!6;UBERON:0003672!8.68e-08!6;UBERON:0000075!1.67e-07!13;UBERON:0005944!1.67e-07!13;UBERON:0004288!1.67e-07!13;UBERON:0003089!1.67e-07!13;UBERON:0000119!3.79e-07!312;UBERON:0003104!7.16e-07!238;UBERON:0009142!7.16e-07!238;UBERON:0000481!9.39e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.69e-29;42!UBERON:0003509;1.69e-29;42!UBERON:0004572;1.69e-29;42!UBERON:0001949;5.07e-27;3!UBERON:0003498;1.33e-26;3!UBERON:0005985;1.33e-26;3!UBERON:0001621;1.33e-26;3!UBERON:0004573;3.74e-26;33!UBERON:0004571;3.74e-26;33!UBERON:0001529;5.87e-19;2!UBERON:0007204;5.87e-19;2!UBERON:0003834;1.34e-16;5!UBERON:0001533;1.34e-16;5!UBERON:0003513;5.11e-12;7!UBERON:0003929;6.28e-12;7!UBERON:0003350;1.67e-10;8!UBERON:0001828;1.67e-10;8!UBERON:0003914;8.11e-10;74!UBERON:0007500;2.23e-09;56!UBERON:0001981;2.23e-09;56!UBERON:0004537;2.23e-09;56!UBERON:0002049;3.49e-09;75!UBERON:0007798;3.49e-09;75!UBERON:0003915;4.70e-09;9!UBERON:0004700;4.70e-09;9!UBERON:0001917;4.70e-09;9!UBERON:0000055;8.30e-08;65!UBERON:0000486;3.68e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.25e-33,42;UBERON:0003509,7.25e-33,42;UBERON:0004572,7.25e-33,42;UBERON:0004573,2.72e-30,33;UBERON:0004571,2.72e-30,33;UBERON:0001949,3.89e-27,3;UBERON:0001621,1.46e-26,3;UBERON:0007500,8.77e-23,59;UBERON:0001981,8.77e-23,59;UBERON:0004537,8.77e-23,59;UBERON:0006965,8.77e-23,59;UBERON:0000055,1.76e-19,68;UBERON:0001529,5.88e-19,2;UBERON:0007204,5.88e-19,2;UBERON:0000486,2.83e-18,83;UBERON:0004872,3.08e-18,83;UBERON:0002049,1.05e-16,78;UBERON:0007798,1.05e-16,78;UBERON:0003834,1.12e-16,5;UBERON:0001533,1.12e-16,5;UBERON:0003498,3.36e-16,5;UBERON:0005985,3.36e-16,5;UBERON:0004535,2.57e-13,109;UBERON:0002329,4.09e-13,71;UBERON:0003059,4.09e-13,71;UBERON:0007282,4.09e-13,71;UBERON:0004290,4.09e-13,71;UBERON:0009618,4.09e-13,71;UBERON:0003077,6.58e-13,72;UBERON:0007285,6.58e-13,72;UBERON:0001009,6.77e-13,112;UBERON:0007524,1.05e-12,73;UBERON:0001134,1.25e-12,62;UBERON:0002036,1.25e-12,62;UBERON:0003082,1.25e-12,62;UBERON:0003914,3.05e-12,117;UBERON:0002385,3.47e-12,64;UBERON:0001015,3.47e-12,64;UBERON:0000383,3.47e-12,64;UBERON:0003513,4.49e-12,7;UBERON:0007503,8.86e-12,78;UBERON:0003350,1.52e-10,8;UBERON:0001828,1.52e-10,8;UBERON:0003915,3.71e-09,9;UBERON:0004700,3.71e-09,9;UBERON:0001917,3.71e-09,9;UBERON:0000490,4.05e-09,148;UBERON:0004111,1.35e-07,240;UBERON:0000119,5.53e-07,309;UBERON:0005256,6.83e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,1.92582629358047,0.417989933073621,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,1.1409436430889,0.597794722207204,0.23486899728753,0,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,2.45471508531751,4.58887352622406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,2.41017665312057,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,1.1734125731352,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,2.59627214591811,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0,0,0.767039646744908,0,0,0,2.04180339991335,0,0.464845549297286,0.31481234683064,0,0.308033580176089,3.72614221221915,0.869932992075073,5.37440235401368,4.57999637574372,0,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0,0,0,1.61745985258653,11.0957224821106,1.26377536871694,0,1.70599442741899,0,0,0,0,0,23.8838031086839,10.0843703608365,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0.686520205190771,0,0,4.28779934969938,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:67875049..67875058,+ | |||
}} |
Latest revision as of 20:23, 25 July 2015
Short description: | p@chr17:67875049..67875058, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:67875049..67875058, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.89e-27 | 3 |
smooth muscle cell of the coronary artery | 1.46e-26 | 3 |
vascular associated smooth muscle cell | 6.93e-26 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 5.88e-19 | 2 |
smooth muscle cell | 6.98e-19 | 43 |
smooth muscle myoblast | 6.98e-19 | 43 |
smooth muscle cell of the subclavian artery | 1.12e-16 | 5 |
muscle cell | 1.97e-14 | 55 |
muscle precursor cell | 1.32e-13 | 58 |
myoblast | 1.32e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-13 | 58 |
electrically responsive cell | 7.34e-13 | 61 |
electrically active cell | 7.34e-13 | 61 |
mesodermal cell | 5.51e-10 | 121 |
embryonic cell | 2.11e-09 | 250 |
endothelial cell of artery | 3.71e-09 | 9 |
cardiocyte | 6.11e-09 | 16 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.82e-10 | 1 |