FFCP PHASE1:Hg19::chr17:7339530..7339542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7339530..7339542,+ | |||
|description=CAGE_peak_at_chr17:7339530..7339542,+ | |description=CAGE_peak_at_chr17:7339530..7339542,+ | ||
|id=chr17:7339530..7339542,+ | |id=chr17:7339530..7339542,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.35e-13!254;CL:0002076!8.14e-12!43;CL:0002368!4.02e-08!13;CL:0000990!4.49e-08!8;CL:0000223!8.95e-08!59;CL:0000063!3.20e-07!578 | |ontology_enrichment_celltype=CL:0000066!1.35e-13!254;CL:0002076!8.14e-12!43;CL:0002368!4.02e-08!13;CL:0000990!4.49e-08!8;CL:0000223!8.95e-08!59;CL:0000063!3.20e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.87e-19;13!CL:0000875;1.44e-17;3!CL:0002396;1.44e-17;3!CL:0002076;7.68e-15;42!CL:0001014;7.01e-12;2!CL:0001016;7.01e-12;2!CL:0002202;1.41e-09;9!CL:0002632;1.41e-09;9!CL:0002159;2.89e-09;14!CL:0000840;1.36e-08;5!CL:0002393;1.36e-08;6!CL:0002397;1.36e-08;6!CL:0002166;3.36e-08;3!CL:0000307;4.16e-08;3!CL:0002621;4.16e-08;3!CL:0002328;7.18e-08;3!CL:0002252;6.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.94e-21,9;CL:0002397,1.94e-21,9;CL:0002368,1.09e-18,13;CL:0002076,1.57e-18,42;CL:0000875,1.49e-17,3;CL:0002396,1.49e-17,3;CL:0000223,1.10e-12,58;CL:0001014,4.19e-12,2;CL:0001016,4.19e-12,2;CL:0002202,1.75e-09,9;CL:0002632,1.75e-09,9;CL:0002159,2.45e-09,14;CL:0000840,9.10e-09,5;CL:0001029,9.10e-09,5;CL:0000066,1.62e-08,253;CL:0002166,3.43e-08,3;CL:0002621,3.55e-08,3;CL:0000068,4.72e-08,3;CL:0000069,4.72e-08,3;CL:0000307,4.72e-08,3;CL:0000377,4.72e-08,3;CL:0002328,8.88e-08,3;CL:0002252,7.19e-07,1;CL:0000313,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;2.27e-08;58!CL:0000377;4.16e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.97e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.16e-08;3!UBERON:0004815;7.18e-08;3!UBERON:0002031;7.18e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.55e-08,3;UBERON:0004815,8.88e-08,3;UBERON:0002031,8.88e-08,3;UBERON:0004911,8.97e-07,1 | |||
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| ||
|short_description=p@chr17:7339530..7339542,+ | |short_description=p@chr17:7339530..7339542,+ | ||
}} | }} |
Latest revision as of 21:05, 25 July 2015
Short description: | p@chr17:7339530..7339542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7339530..7339542, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.94e-21 | 9 |
CD14-positive, CD16-positive monocyte | 1.94e-21 | 9 |
respiratory epithelial cell | 1.09e-18 | 13 |
endo-epithelial cell | 1.57e-18 | 42 |
non-classical monocyte | 1.49e-17 | 3 |
CD14-low, CD16-positive monocyte | 1.49e-17 | 3 |
endodermal cell | 1.10e-12 | 58 |
CD1a-positive Langerhans cell | 4.19e-12 | 2 |
immature CD1a-positive Langerhans cell | 4.19e-12 | 2 |
epithelial cell of tracheobronchial tree | 1.75e-09 | 9 |
epithelial cell of lower respiratory tract | 1.75e-09 | 9 |
general ecto-epithelial cell | 2.45e-09 | 14 |
immature conventional dendritic cell | 9.10e-09 | 5 |
common dendritic progenitor | 9.10e-09 | 5 |
epithelial cell | 1.62e-08 | 253 |
epithelial cell of Malassez | 3.43e-08 | 3 |
gingival epithelial cell | 3.55e-08 | 3 |
duct epithelial cell | 4.72e-08 | 3 |
branched duct epithelial cell | 4.72e-08 | 3 |
tracheal epithelial cell | 4.72e-08 | 3 |
tracheoblast | 4.72e-08 | 3 |
bronchial epithelial cell | 8.88e-08 | 3 |
epithelial cell of esophagus | 7.19e-07 | 1 |
serous secreting cell | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.55e-08 | 3 |
lower respiratory tract epithelium | 8.88e-08 | 3 |
epithelium of bronchus | 8.88e-08 | 3 |
epithelium of female gonad | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.97e-07 | 1 |