FFCP PHASE1:Hg19::chr17:73521518..73521532,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73521518..73521532,- | |||
|description=CAGE_peak_at_chr17:73521518..73521532,- | |description=CAGE_peak_at_chr17:73521518..73521532,- | ||
|id=chr17:73521518..73521532,- | |id=chr17:73521518..73521532,- | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-16!254;CL:0002076!4.42e-12!43;CL:0000223!8.63e-09!59;CL:0002322!1.60e-08!5;CL:0002251!2.20e-07!21;CL:0002327!8.16e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.18e-16!254;CL:0002076!4.42e-12!43;CL:0000223!8.63e-09!59;CL:0002322!1.60e-08!5;CL:0002251!2.20e-07!21;CL:0002327!8.16e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.43e-16;5!CL:0002252;5.06e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.03e-16,5;CL:0002252,4.44e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.72e-10;1 | |||
|ontology_enrichment_disease=DOID:305!5.27e-17!106;DOID:0050687!5.21e-12!143;DOID:1749!1.56e-08!14;DOID:5093!2.94e-08!4;DOID:1612!2.94e-08!4;DOID:299!8.88e-07!25 | |ontology_enrichment_disease=DOID:305!5.27e-17!106;DOID:0050687!5.21e-12!143;DOID:1749!1.56e-08!14;DOID:5093!2.94e-08!4;DOID:1612!2.94e-08!4;DOID:299!8.88e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.21e-35;4!DOID:1612;1.21e-35;4!DOID:0050619;5.06e-10;1!DOID:1357;5.06e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.69e-36,4;DOID:1612,3.69e-36,4;DOID:0050619,8.99e-10,1;DOID:1357,8.99e-10,1;DOID:7,9.51e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.60e-12!169;UBERON:0000925!1.60e-12!169;UBERON:0006595!1.60e-12!169;UBERON:0005153!2.26e-11!37;UBERON:0001007!1.83e-09!155;UBERON:0001555!1.83e-09!155;UBERON:0007026!1.83e-09!155;UBERON:0005631!2.99e-09!14;UBERON:0000158!2.99e-09!14;UBERON:0005157!1.54e-08!51;UBERON:0001004!1.79e-08!72;UBERON:0005911!3.35e-08!82;UBERON:0000974!5.95e-08!10;UBERON:0004921!2.05e-07!129;UBERON:0004185!2.05e-07!129;UBERON:0004175!2.29e-07!25;UBERON:0003729!3.10e-07!5;UBERON:0005156!4.24e-07!59;UBERON:0000990!4.24e-07!59;UBERON:0001911!8.16e-07!4;UBERON:0005333!8.16e-07!4;UBERON:0008425!8.16e-07!4;UBERON:0005311!8.16e-07!4 | |ontology_enrichment_uberon=UBERON:0004119!1.60e-12!169;UBERON:0000925!1.60e-12!169;UBERON:0006595!1.60e-12!169;UBERON:0005153!2.26e-11!37;UBERON:0001007!1.83e-09!155;UBERON:0001555!1.83e-09!155;UBERON:0007026!1.83e-09!155;UBERON:0005631!2.99e-09!14;UBERON:0000158!2.99e-09!14;UBERON:0005157!1.54e-08!51;UBERON:0001004!1.79e-08!72;UBERON:0005911!3.35e-08!82;UBERON:0000974!5.95e-08!10;UBERON:0004921!2.05e-07!129;UBERON:0004185!2.05e-07!129;UBERON:0004175!2.29e-07!25;UBERON:0003729!3.10e-07!5;UBERON:0005156!4.24e-07!59;UBERON:0000990!4.24e-07!59;UBERON:0001911!8.16e-07!4;UBERON:0005333!8.16e-07!4;UBERON:0008425!8.16e-07!4;UBERON:0005311!8.16e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.98e-14;10!UBERON:0001443;3.89e-13;11!UBERON:0001000;5.06e-10;1!UBERON:0001764;5.06e-10;1!UBERON:0001825;5.06e-10;1!UBERON:0005352;5.06e-10;1!UBERON:0000915;7.71e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.24e-14,10;UBERON:0001443,2.55e-13,11;UBERON:0001000,3.10e-10,1;UBERON:0005352,3.10e-10,1;UBERON:0001764,8.99e-10,1;UBERON:0001825,8.99e-10,1;UBERON:0000915,1.28e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,1.09776335516636,1.98794652482228,0.580969714347592,0.10366105501537,1.26160425437814,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.593929361665277,3.99308912729002,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0.449341755736634,1.43216939740487,0,0,0,0,0,0,0,1.82299432759663,3.67331999984022,0,0.1137934482855,0.254253650292766,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0.23056390438806,0.179515288819544,0.434589487688032,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0.391329237864179,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0.174118413160805,0.52418000472609,0,0,0.0730893170861856,0,0.290967049465258,0,0.451961481561065,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.643012593860077,0.825236619583403,0.415440338029185,0,0,0.0607495566580247,0.670869375198532,0.315222829196793,0.681909645754975,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,1.40963004463334,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0.266107110487916,0,0,0,0,0.236387681767936,0.111231401892069,0.313972371402056,0,1.12108865325516,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0.098150233615243,0.609589624911347,0,0,0,0.485710993059139,0.935757853848423,0.198950775161368,0,1.35535298446752,0,0.301925687133347,0.540219106755613,0.437119121007915,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,0,0.401206833445841,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,0.303114792872958,0,0,0,0.426467963801962,0.23806443146374,0,0.124149428591716,0,1.0820016907288,0.606351566874658,0,0,0,0.358611026963382,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,1.09776335516636,1.98794652482228,0.580969714347592,0.10366105501537,1.26160425437814,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.593929361665277,3.99308912729002,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0.449341755736634,1.43216939740487,0,0,0,0,0,0,0,1.82299432759663,3.67331999984022,0,0.1137934482855,0.254253650292766,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0.23056390438806,0.179515288819544,0.434589487688032,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0.391329237864179,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0.174118413160805,0.52418000472609,0,0,0.0730893170861856,0,0.290967049465258,0,0.451961481561065,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.643012593860077,0.825236619583403,0.415440338029185,0,0,0.0607495566580247,0.670869375198532,0.315222829196793,0.681909645754975,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,1.40963004463334,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0.266107110487916,0,0,0,0,0.236387681767936,0.111231401892069,0.313972371402056,0,1.12108865325516,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0.098150233615243,0.609589624911347,0,0,0,0.485710993059139,0.935757853848423,0.198950775161368,0,1.35535298446752,0,0.301925687133347,0.540219106755613,0.437119121007915,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,0,0.401206833445841,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,0.303114792872958,0,0,0,0.426467963801962,0.23806443146374,0,0.124149428591716,0,1.0820016907288,0.606351566874658,0,0,0,0.358611026963382,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p@chr17:73521518..73521532,- | |short_description=p@chr17:73521518..73521532,- | ||
}} | }} |
Latest revision as of 21:07, 25 July 2015
Short description: | p@chr17:73521518..73521532, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73521518..73521532, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.03e-16 | 5 |
epithelial cell of esophagus | 4.44e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
breast | 1.24e-14 | 10 |
chest | 2.55e-13 | 11 |
vas deferens | 3.10e-10 | 1 |
spermatic cord | 3.10e-10 | 1 |
maxillary sinus | 8.99e-10 | 1 |
paranasal sinus | 8.99e-10 | 1 |
thoracic segment of trunk | 1.28e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.69e-36 | 4 |
breast cancer | 3.69e-36 | 4 |
paranasal sinus cancer | 8.99e-10 | 1 |
maxillary sinus cancer | 8.99e-10 | 1 |
disease of anatomical entity | 9.51e-08 | 39 |