FFCP PHASE1:Hg19::chr17:73753856..73753871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-266bp_to_CU674593_5end | |association_with_transcript=-266bp_to_CU674593_5end | ||
|cluster_id=chr17:73753856..73753871,+ | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_1_at_CU674593_5end | |description=CAGE_peak_1_at_CU674593_5end | ||
|id=chr17:73753856..73753871,+ | |id=chr17:73753856..73753871,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.79e-12!254;CL:0002251!1.29e-11!21;CL:0000223!4.96e-11!59;CL:0002621!2.68e-10!3;CL:0002076!8.50e-10!43;CL:0000083!5.46e-07!4 | |ontology_enrichment_celltype=CL:0000066!2.79e-12!254;CL:0002251!1.29e-11!21;CL:0000223!4.96e-11!59;CL:0002621!2.68e-10!3;CL:0002076!8.50e-10!43;CL:0000083!5.46e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.52e-87;3!CL:0000312;1.40e-14;5!CL:0002251;2.76e-14;20!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0000362;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.52e-87,3;CL:0000312,1.40e-14,5;CL:0002251,2.76e-14,20;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000362,1.04e-08,9;CL:0002076,2.17e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6 | |||
|ontology_enrichment_disease=DOID:305!5.26e-08!106;DOID:170!6.59e-08!6;DOID:1793!5.46e-07!4;DOID:1749!8.05e-07!14 | |ontology_enrichment_disease=DOID:305!5.26e-08!106;DOID:170!6.59e-08!6;DOID:1793!5.46e-07!4;DOID:1749!8.05e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.15e-12!169;UBERON:0000925!1.15e-12!169;UBERON:0006595!1.15e-12!169;UBERON:0001949!2.68e-10!3;UBERON:0001007!6.93e-09!155;UBERON:0001555!6.93e-09!155;UBERON:0007026!6.93e-09!155;UBERON:0005910!1.09e-07!6;UBERON:0000344!1.41e-07!12;UBERON:0000161!1.42e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!1.15e-12!169;UBERON:0000925!1.15e-12!169;UBERON:0006595!1.15e-12!169;UBERON:0001949!2.68e-10!3;UBERON:0001007!6.93e-09!155;UBERON:0001555!6.93e-09!155;UBERON:0007026!6.93e-09!155;UBERON:0005910!1.09e-07!6;UBERON:0000344!1.41e-07!12;UBERON:0000161!1.42e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.52e-87;3!UBERON:0003929;2.18e-38;7!UBERON:0003350;9.08e-34;8!UBERON:0001828;9.08e-34;8!UBERON:0000486;5.74e-23;12!UBERON:0003729;2.66e-21;13!UBERON:0010371;8.88e-21;31!UBERON:0000161;5.66e-15;19!UBERON:0000166;5.66e-15;19!UBERON:0000344;2.76e-14;20!UBERON:0004807;4.26e-13;22!UBERON:0000165;1.54e-10;28!UBERON:0005911;2.59e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.52e-87,3;UBERON:0003350,9.08e-34,8;UBERON:0001828,9.08e-34,8;UBERON:0003729,2.66e-21,13;UBERON:0000344,2.76e-14,20;UBERON:0000166,4.26e-13,22;UBERON:0004807,1.54e-10,28;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000161,1.92e-08,36;UBERON:0003102,4.88e-07,99 | |||
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| ||
|short_description=p1@CU674593 | |short_description=p1@CU674593 | ||
}} | }} |
Latest revision as of 21:13, 25 July 2015
Short description: | p1@CU674593 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU674593_5end |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | -266bp_to_CU674593_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.52e-87 | 3 |
keratinocyte | 1.40e-14 | 5 |
epithelial cell of alimentary canal | 2.76e-14 | 20 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
epidermal cell | 1.04e-08 | 9 |
endo-epithelial cell | 2.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.52e-87 | 3 |
epithelium of mucosa | 9.08e-34 | 8 |
gingiva | 9.08e-34 | 8 |
mouth mucosa | 2.66e-21 | 13 |
mucosa | 2.76e-14 | 20 |
oral opening | 4.26e-13 | 22 |
respiratory system epithelium | 1.54e-10 | 28 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
orifice | 1.92e-08 | 36 |
surface structure | 4.88e-07 | 99 |