FFCP PHASE1:Hg19::chr17:74583031..74583040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:74583031..74583040,- | |||
|description=CAGE_peak_at_chr17:74583031..74583040,- | |description=CAGE_peak_at_chr17:74583031..74583040,- | ||
|id=chr17:74583031..74583040,- | |id=chr17:74583031..74583040,- | ||
|ontology_enrichment_celltype=CL:0002076!1.73e-18!43;CL:0002368!9.98e-16!13;CL:0000223!1.26e-13!59;CL:0000244!7.55e-12!4;CL:0000731!7.55e-12!4;CL:0000240!1.81e-11!6;CL:0000311!1.81e-11!6;CL:0000079!1.81e-11!6;CL:0000237!1.81e-11!6;CL:0000036!1.81e-11!6;CL:0000357!1.81e-11!6;CL:0000114!1.81e-11!6;CL:0002202!1.64e-10!9;CL:0002632!1.64e-10!9;CL:0002159!1.83e-09!13;CL:0002328!4.46e-09!3;CL:0000312!5.52e-09!5;CL:0000362!2.02e-08!8;CL:0000066!3.57e-08!254;CL:0002251!2.45e-07!21 | |ontology_enrichment_celltype=CL:0002076!1.73e-18!43;CL:0002368!9.98e-16!13;CL:0000223!1.26e-13!59;CL:0000244!7.55e-12!4;CL:0000731!7.55e-12!4;CL:0000240!1.81e-11!6;CL:0000311!1.81e-11!6;CL:0000079!1.81e-11!6;CL:0000237!1.81e-11!6;CL:0000036!1.81e-11!6;CL:0000357!1.81e-11!6;CL:0000114!1.81e-11!6;CL:0002202!1.64e-10!9;CL:0002632!1.64e-10!9;CL:0002159!1.83e-09!13;CL:0002328!4.46e-09!3;CL:0000312!5.52e-09!5;CL:0000362!2.02e-08!8;CL:0000066!3.57e-08!254;CL:0002251!2.45e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002251;1.04e-13;20!CL:0002076;5.80e-13;42!CL:0002336;2.75e-12;1!CL:0002261;2.75e-12;1!CL:0002252;2.75e-12;1!CL:0002170;2.75e-12;1!CL:0000244;3.97e-12;4!CL:0000731;3.97e-12;4!CL:0000240;3.13e-08;6!CL:0000311;3.13e-08;6!CL:0000079;3.13e-08;6!CL:0000237;3.13e-08;6!CL:0001014;6.07e-07;2!CL:0001016;6.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.91e-16,42;CL:0002251,9.48e-14,20;CL:0002252,2.20e-12,1;CL:0000244,3.27e-12,4;CL:0000731,3.27e-12,4;CL:0002336,4.31e-12,1;CL:0002261,4.31e-12,1;CL:0002170,4.31e-12,1;CL:0000223,3.18e-11,58;CL:0000240,3.90e-08,6;CL:0000311,3.90e-08,6;CL:0000079,3.90e-08,6;CL:0000237,3.90e-08,6;CL:0000036,3.90e-08,6;CL:0000357,3.90e-08,6;CL:0000114,3.90e-08,6;CL:0001014,6.42e-07,2;CL:0001016,6.42e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;9.76e-10;58!CL:0000357;3.13e-08;6!CL:0000114;3.13e-08;6!UBERON:0008814;9.01e-07;2!UBERON:0010056;9.01e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!1.66e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;7.88e-13;1!DOID:3149;7.88e-13;1!DOID:4362;6.22e-10;5!DOID:1749;1.07e-07;14!DOID:3451;4.82e-07;2!DOID:4159;4.82e-07;2!DOID:0060122;4.82e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.89e-13,1;DOID:3149,7.89e-13,1;DOID:4362,6.51e-10,5;DOID:1749,9.46e-08,14;DOID:3451,4.83e-07,2;DOID:4159,4.83e-07,2;DOID:0060122,4.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.67e-14!5;UBERON:0000365!8.54e-14!5;UBERON:0000974!1.05e-12!10;UBERON:0003343!6.76e-12!4;UBERON:0004785!6.76e-12!4;UBERON:0005910!1.98e-11!6;UBERON:0004119!2.25e-09!169;UBERON:0000925!2.25e-09!169;UBERON:0006595!2.25e-09!169;UBERON:0001723!4.34e-09!3;UBERON:0001033!4.34e-09!3;UBERON:0010056!4.34e-09!3;UBERON:0004815!4.46e-09!3;UBERON:0002031!4.46e-09!3;UBERON:0001004!1.00e-08!72;UBERON:0007196!1.36e-08!14;UBERON:0001558!1.36e-08!14;UBERON:0000065!7.30e-08!53;UBERON:0000344!7.92e-08!12;UBERON:0000161!5.53e-07!35;UBERON:0002185!6.87e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.74e-25;4!UBERON:0004785;1.74e-25;4!UBERON:0000974;3.22e-17;6!UBERON:0003729;7.57e-14;13!UBERON:0000365;6.95e-10;5!UBERON:0000344;4.43e-09;20!UBERON:0000002;2.02e-08;6!UBERON:0001560;2.02e-08;6!UBERON:0005910;2.21e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.10e-25,4;UBERON:0004785,1.10e-25,4;UBERON:0003729,7.21e-14,13;UBERON:0000974,1.20e-10,10;UBERON:0000365,5.95e-10,5;UBERON:0000344,4.29e-09,20;UBERON:0005910,1.94e-08,6;UBERON:0000002,2.09e-08,6;UBERON:0001560,2.09e-08,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.38121483403844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.893288987462089,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,0,0,0.43050537267123,3.36942951335251,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.796554137998498,0.254253650292766,0,2.41320361269025,0,0,0,0,0,0,0,0,0,7.25003470248737,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,5.36695500158826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0.37494122388632,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04257927353179,0.11796972334774,1.28400018965175,1.96393632455575,0,0,0,0.676892955143315,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0.485710993059139,1.16969731731053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4072715192173,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0,0,0,0,0.217716747896961,0.684466602170562,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:74583031..74583040,- | |short_description=p@chr17:74583031..74583040,- | ||
}} | }} |
Latest revision as of 21:30, 25 July 2015
Short description: | p@chr17:74583031..74583040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74583031..74583040, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.91e-16 | 42 |
epithelial cell of alimentary canal | 9.48e-14 | 20 |
epithelial cell of esophagus | 2.20e-12 | 1 |
transitional epithelial cell | 3.27e-12 | 4 |
urothelial cell | 3.27e-12 | 4 |
buccal mucosa cell | 4.31e-12 | 1 |
endothelial cell of viscerocranial mucosa | 4.31e-12 | 1 |
keratinized cell of the oral mucosa | 4.31e-12 | 1 |
endodermal cell | 3.18e-11 | 58 |
stratified squamous epithelial cell | 3.90e-08 | 6 |
keratin accumulating cell | 3.90e-08 | 6 |
stratified epithelial cell | 3.90e-08 | 6 |
keratinizing barrier epithelial cell | 3.90e-08 | 6 |
epithelial fate stem cell | 3.90e-08 | 6 |
stratified epithelial stem cell | 3.90e-08 | 6 |
surface ectodermal cell | 3.90e-08 | 6 |
CD1a-positive Langerhans cell | 6.42e-07 | 2 |
immature CD1a-positive Langerhans cell | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.10e-25 | 4 |
respiratory system mucosa | 1.10e-25 | 4 |
mouth mucosa | 7.21e-14 | 13 |
neck | 1.20e-10 | 10 |
urothelium | 5.95e-10 | 5 |
mucosa | 4.29e-09 | 20 |
transitional epithelium | 1.94e-08 | 6 |
uterine cervix | 2.09e-08 | 6 |
neck of organ | 2.09e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.89e-13 | 1 |
keratoacanthoma | 7.89e-13 | 1 |
cervical cancer | 6.51e-10 | 5 |
squamous cell carcinoma | 9.46e-08 | 14 |
skin carcinoma | 4.83e-07 | 2 |
skin cancer | 4.83e-07 | 2 |
integumentary system cancer | 4.83e-07 | 2 |