FFCP PHASE1:Hg19::chr17:80858468..80858488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80858468..80858488,+ | |||
|description=CAGE_peak_at_chr17:80858468..80858488,+ | |description=CAGE_peak_at_chr17:80858468..80858488,+ | ||
|id=chr17:80858468..80858488,+ | |id=chr17:80858468..80858488,+ | ||
|ontology_enrichment_celltype=CL:0000153!7.21e-11!9;CL:0000447!7.21e-11!9;CL:0002594!7.84e-09!4;CL:0000667!8.39e-09!6;CL:0000058!8.39e-09!6;CL:0000138!8.39e-09!6;CL:0002540!3.57e-08!6;CL:0000135!8.74e-08!3;CL:0000386!8.74e-08!3;CL:0000388!8.74e-08!3;CL:0000349!2.55e-07!3;CL:0002577!2.55e-07!3;CL:0002580!7.28e-07!3;CL:0002564!7.58e-07!3 | |ontology_enrichment_celltype=CL:0000153!7.21e-11!9;CL:0000447!7.21e-11!9;CL:0002594!7.84e-09!4;CL:0000667!8.39e-09!6;CL:0000058!8.39e-09!6;CL:0000138!8.39e-09!6;CL:0002540!3.57e-08!6;CL:0000135!8.74e-08!3;CL:0000386!8.74e-08!3;CL:0000388!8.74e-08!3;CL:0000349!2.55e-07!3;CL:0002577!2.55e-07!3;CL:0002580!7.28e-07!3;CL:0002564!7.58e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.70e-20;19!CL:0000135;5.40e-20;3!CL:0000388;5.40e-20;3!CL:0000153;1.37e-16;9!CL:0000447;1.37e-16;9!CL:0000138;4.35e-16;6!CL:0002594;4.84e-14;4!CL:0002536;1.66e-13;2!CL:0000499;6.03e-13;28!CL:0002537;3.91e-12;5!CL:0000327;7.03e-10;15!CL:0002577;2.06e-09;3!CL:0000222;8.00e-08;1 | |ontology_enrichment_celltype_v019=CL:0000349;3.70e-20;19!CL:0000135;5.40e-20;3!CL:0000388;5.40e-20;3!CL:0000153;1.37e-16;9!CL:0000447;1.37e-16;9!CL:0000138;4.35e-16;6!CL:0002594;4.84e-14;4!CL:0002536;1.66e-13;2!CL:0000499;6.03e-13;28!CL:0002537;3.91e-12;5!CL:0000327;7.03e-10;15!CL:0002577;2.06e-09;3!CL:0000222;8.00e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.00e-20,19;CL:0000135,5.08e-20,3;CL:0000388,5.08e-20,3;CL:0000153,1.42e-16,9;CL:0000447,1.42e-16,9;CL:0000058,4.71e-16,6;CL:0000138,4.71e-16,6;CL:0002594,4.13e-14,4;CL:0002536,1.33e-13,2;CL:0000499,6.04e-13,28;CL:0002537,4.46e-12,5;CL:0000327,7.17e-10,15;CL:0002577,2.24e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.66e-07;1 | |ontology_enrichment_development_v019=UBERON:0010115;1.66e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;1.66e-07;1!DOID:4235;1.66e-07;1 | |ontology_enrichment_disease_v019=DOID:3369;1.66e-07;1!DOID:4235;1.66e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,1.33e-07,1;DOID:4235,1.83e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.40e-16!14;UBERON:0000158!1.40e-16!14;UBERON:0000478!4.75e-12!24;UBERON:0003124!3.93e-10!7;UBERON:0001987!5.69e-09!4;UBERON:0004340!5.69e-09!4;UBERON:0001310!7.84e-09!4;UBERON:0000305!3.81e-08!7;UBERON:0000043!8.74e-08!3;UBERON:0004905!4.39e-07!5;UBERON:0000982!4.39e-07!5;UBERON:0004770!4.39e-07!5;UBERON:0004871!4.81e-07!8;UBERON:0002242!7.58e-07!3;UBERON:0003068!7.58e-07!3;UBERON:0002328!7.58e-07!3;UBERON:0004880!7.58e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!1.40e-16!14;UBERON:0000158!1.40e-16!14;UBERON:0000478!4.75e-12!24;UBERON:0003124!3.93e-10!7;UBERON:0001987!5.69e-09!4;UBERON:0004340!5.69e-09!4;UBERON:0001310!7.84e-09!4;UBERON:0000305!3.81e-08!7;UBERON:0000043!8.74e-08!3;UBERON:0004905!4.39e-07!5;UBERON:0000982!4.39e-07!5;UBERON:0004770!4.39e-07!5;UBERON:0004871!4.81e-07!8;UBERON:0002242!7.58e-07!3;UBERON:0003068!7.58e-07!3;UBERON:0002328!7.58e-07!3;UBERON:0004880!7.58e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.60e-22;7!UBERON:0007846;5.40e-20;3!UBERON:0000043;5.40e-20;3!UBERON:0007845;5.40e-20;3!UBERON:0005631;1.03e-15;10!UBERON:0000158;1.03e-15;10!UBERON:0000478;1.04e-15;24!UBERON:0001310;4.84e-14;4!UBERON:0002363;1.66e-07;1!UBERON:0001987;2.92e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000305;1.60e-22;7!UBERON:0007846;5.40e-20;3!UBERON:0000043;5.40e-20;3!UBERON:0007845;5.40e-20;3!UBERON:0005631;1.03e-15;10!UBERON:0000158;1.03e-15;10!UBERON:0000478;1.04e-15;24!UBERON:0001310;4.84e-14;4!UBERON:0002363;1.66e-07;1!UBERON:0001987;2.92e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.60e-22,7;UBERON:0005631,2.62e-21,14;UBERON:0000158,2.62e-21,14;UBERON:0007846,5.08e-20,3;UBERON:0000043,5.08e-20,3;UBERON:0007845,5.08e-20,3;UBERON:0004871,1.10e-19,8;UBERON:0000478,1.10e-15,24;UBERON:0001310,4.13e-14,4;UBERON:0002363,1.61e-07,1;UBERON:0007645,1.61e-07,1;UBERON:0007647,1.61e-07,1;UBERON:0010115,1.61e-07,1;UBERON:0001987,3.11e-07,4;UBERON:0004340,3.11e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,3.9319446983431,2.63766978228454,0.866364470720326,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.15877215168659,2.3858578411533,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,1.80054657650641,0.309157587715317,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11512312139057,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,1.08506009479894,0,0,0,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0,0.195801157462741,0,0,0,0,3.03127571446259,3.32870879020994,0.604780586659361,0.496215615637554,1.38115775959256,0.841980283299221,0,0,0,0,0,0.710246901252508,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63783490051515,0.30982349809975,1.12678241012897,0,0,1.78335525740625,0,3.37772216476263,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,6.83018765915069,7.37185685038157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.63599316893057,0.554805861502613,0.189403005275089,1.25783950876288,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.686791410365586,0.673498977531838,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.436350690340377,0,4.46394021800102,5.0839319149456,5.62414530760926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,3.9319446983431,2.63766978228454,0.866364470720326,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.15877215168659,2.3858578411533,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,1.80054657650641,0.309157587715317,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11512312139057,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,1.08506009479894,0,0,0,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0,0.195801157462741,0,0,0,0,3.03127571446259,3.32870879020994,0.604780586659361,0.496215615637554,1.38115775959256,0.841980283299221,0,0,0,0,0,0.710246901252508,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63783490051515,0.30982349809975,1.12678241012897,0,0,1.78335525740625,0,3.37772216476263,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,6.83018765915069,7.37185685038157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.63599316893057,0.554805861502613,0.189403005275089,1.25783950876288,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.686791410365586,0.673498977531838,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.436350690340377,0,4.46394021800102,5.0839319149456,5.62414530760926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:80858468..80858488,+ | |short_description=p@chr17:80858468..80858488,+ | ||
}} | }} |
Latest revision as of 23:16, 25 July 2015
Short description: | p@chr17:80858468..80858488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80858468..80858488, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.00e-20 | 19 |
fibrocyte | 5.08e-20 | 3 |
tendon cell | 5.08e-20 | 3 |
GAG secreting cell | 1.42e-16 | 9 |
carbohydrate secreting cell | 1.42e-16 | 9 |
chondroblast | 4.71e-16 | 6 |
chondrocyte | 4.71e-16 | 6 |
smooth muscle cell of the umbilical artery | 4.13e-14 | 4 |
amniotic epithelial cell | 1.33e-13 | 2 |
stromal cell | 6.04e-13 | 28 |
amnion mesenchymal stem cell | 4.46e-12 | 5 |
extracellular matrix secreting cell | 7.17e-10 | 15 |
placental epithelial cell | 2.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.60e-22 | 7 |
extraembryonic membrane | 2.62e-21 | 14 |
membranous layer | 2.62e-21 | 14 |
dense regular connective tissue | 5.08e-20 | 3 |
tendon | 5.08e-20 | 3 |
regular connective tissue | 5.08e-20 | 3 |
somatic layer of lateral plate mesoderm | 1.10e-19 | 8 |
extraembryonic structure | 1.10e-15 | 24 |
umbilical artery | 4.13e-14 | 4 |
dura mater | 1.61e-07 | 1 |
future meninx | 1.61e-07 | 1 |
ectomeninx | 1.61e-07 | 1 |
future dura mater | 1.61e-07 | 1 |
placenta | 3.11e-07 | 4 |
allantois | 3.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.33e-07 | 1 |
spindle cell sarcoma | 1.83e-07 | 1 |