FFCP PHASE1:Hg19::chr18:21461943..21461955,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:21461943..21461955,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21461943..21461955,+ | |||
|id=chr18:21461943..21461955,+ | |||
|ontology_enrichment_celltype=CL:0002076!8.30e-33!43;CL:0000223!7.31e-24!59;CL:0000066!4.49e-21!254;CL:0002368!1.37e-15!13;CL:0002251!3.95e-13!21;CL:0002159!5.12e-10!13;CL:0002621!1.94e-09!3;CL:0000622!2.86e-09!5;CL:0002541!3.36e-09!3;CL:0000362!9.16e-09!8;CL:0002328!9.57e-09!3;CL:0000240!8.87e-08!6;CL:0000311!8.87e-08!6;CL:0000079!8.87e-08!6;CL:0000237!8.87e-08!6;CL:0000036!8.87e-08!6;CL:0000357!8.87e-08!6;CL:0000114!8.87e-08!6;CL:0000154!1.04e-07!6;CL:0002202!3.28e-07!9;CL:0002632!3.28e-07!9;CL:0002327!5.76e-07!4;CL:0000076!7.20e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.08e-27;3!CL:0002076;4.83e-17;42!CL:0002159;2.90e-16;14!CL:0002166;1.87e-13;3!CL:0002541;2.25e-13;3!CL:0002368;2.07e-11;13!CL:0002327;7.83e-10;4!CL:0000362;1.25e-09;9!CL:0000622;2.99e-08;5!CL:0000312;4.86e-08;5!CL:0000349;6.37e-08;19!CL:0002251;2.06e-07;20!CL:0000154;5.18e-07;6!CL:0000240;7.75e-07;6!CL:0000311;7.75e-07;6!CL:0000079;7.75e-07;6!CL:0000237;7.75e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.71e-27,3;CL:0002076,4.54e-20,42;CL:0002159,2.95e-16,14;CL:0000223,3.96e-14,58;CL:0002541,1.81e-13,3;CL:0002166,1.81e-13,3;CL:0002368,1.94e-11,13;CL:0000066,6.16e-10,253;CL:0002327,8.19e-10,4;CL:0000362,1.29e-09,9;CL:0000622,2.94e-08,5;CL:0000312,5.04e-08,5;CL:0000349,5.98e-08,19;CL:0002251,2.23e-07,20;CL:0000154,5.10e-07,6;CL:0000240,7.98e-07,6;CL:0000311,7.98e-07,6;CL:0000079,7.98e-07,6;CL:0000237,7.98e-07,6;CL:0000036,7.98e-07,6;CL:0000357,7.98e-07,6;CL:0000114,7.98e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.66e-07;58!CL:0000357;7.75e-07;6!CL:0000114;7.75e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!8.25e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.85e-14!14;UBERON:0000158!1.85e-14!14;UBERON:0004119!5.19e-11!169;UBERON:0000925!5.19e-11!169;UBERON:0006595!5.19e-11!169;UBERON:0001004!1.21e-10!72;UBERON:0000161!9.44e-10!35;UBERON:0003124!1.31e-09!7;UBERON:0001949!1.94e-09!3;UBERON:0000476!3.36e-09!3;UBERON:0000920!3.36e-09!3;UBERON:0004815!9.57e-09!3;UBERON:0002031!9.57e-09!3;UBERON:0003729!2.15e-08!5;UBERON:0007196!3.77e-08!14;UBERON:0001558!3.77e-08!14;UBERON:0000478!1.16e-07!24;UBERON:0001911!5.76e-07!4;UBERON:0005333!5.76e-07!4;UBERON:0008425!5.76e-07!4;UBERON:0005311!5.76e-07!4;UBERON:0000166!6.30e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.08e-27;3!UBERON:0005631;6.82e-15;10!UBERON:0000158;6.82e-15;10!UBERON:0003124;2.25e-13;3!UBERON:0000920;2.25e-13;3!UBERON:0003929;3.15e-12;7!UBERON:0003350;9.10e-11;8!UBERON:0001828;9.10e-11;8!UBERON:0001708;2.56e-10;4!UBERON:0008895;2.56e-10;4!UBERON:0001911;7.83e-10;4!UBERON:0010371;7.95e-10;31!UBERON:0011159;2.00e-08;5!UBERON:0000161;8.53e-08;19!UBERON:0000166;8.53e-08;19!UBERON:0000486;2.42e-07;12!UBERON:0003729;8.19e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.71e-27,3;UBERON:0000920,1.81e-13,3;UBERON:0005631,9.80e-11,14;UBERON:0000158,9.80e-11,14;UBERON:0003350,1.08e-10,8;UBERON:0001828,1.08e-10,8;UBERON:0001708,2.51e-10,4;UBERON:0008895,2.51e-10,4;UBERON:0001911,8.19e-10,4;UBERON:0005333,8.19e-10,4;UBERON:0008425,8.19e-10,4;UBERON:0005311,8.19e-10,4;UBERON:0011159,1.97e-08,5;UBERON:0003102,1.14e-07,99;UBERON:0010188,3.66e-07,6;UBERON:0002539,3.66e-07,6;UBERON:0008816,3.66e-07,6;UBERON:0001004,8.32e-07,74;UBERON:0003729,9.06e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.52908960491121,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,3.00020732649918,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,1.60846355858609,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2153387433578,2.55195175036296,1.07470227243418,1.74380363108377,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,1.98341898433174,3.84380134730212,0.382838137483752,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,2.17781969722645,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,2.3874448473769,0,0.921482106297696,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87101043758728,0.183195186803725,3.73124343213044,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.550285795565037,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,1.45051314914126,0.51215543128185,0,0,0,0,0.423387050190929,2.7492824225286,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,2.47026410200984,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:21461943..21461955,+ | |||
}} |
Latest revision as of 23:59, 25 July 2015
Short description: | p@chr18:21461943..21461955, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21461943..21461955, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.71e-27 | 3 |
endo-epithelial cell | 4.54e-20 | 42 |
general ecto-epithelial cell | 2.95e-16 | 14 |
endodermal cell | 3.96e-14 | 58 |
chorionic membrane mesenchymal stem cell | 1.81e-13 | 3 |
epithelial cell of Malassez | 1.81e-13 | 3 |
respiratory epithelial cell | 1.94e-11 | 13 |
epithelial cell | 6.16e-10 | 253 |
mammary gland epithelial cell | 8.19e-10 | 4 |
epidermal cell | 1.29e-09 | 9 |
acinar cell | 2.94e-08 | 5 |
keratinocyte | 5.04e-08 | 5 |
extraembryonic cell | 5.98e-08 | 19 |
epithelial cell of alimentary canal | 2.23e-07 | 20 |
protein secreting cell | 5.10e-07 | 6 |
stratified squamous epithelial cell | 7.98e-07 | 6 |
keratin accumulating cell | 7.98e-07 | 6 |
stratified epithelial cell | 7.98e-07 | 6 |
keratinizing barrier epithelial cell | 7.98e-07 | 6 |
epithelial fate stem cell | 7.98e-07 | 6 |
stratified epithelial stem cell | 7.98e-07 | 6 |
surface ectodermal cell | 7.98e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.71e-27 | 3 |
egg chorion | 1.81e-13 | 3 |
extraembryonic membrane | 9.80e-11 | 14 |
membranous layer | 9.80e-11 | 14 |
epithelium of mucosa | 1.08e-10 | 8 |
gingiva | 1.08e-10 | 8 |
jaw skeleton | 2.51e-10 | 4 |
splanchnocranium | 2.51e-10 | 4 |
mammary gland | 8.19e-10 | 4 |
mammary bud | 8.19e-10 | 4 |
mammary ridge | 8.19e-10 | 4 |
mammary placode | 8.19e-10 | 4 |
primary subdivision of cranial skeletal system | 1.97e-08 | 5 |
surface structure | 1.14e-07 | 99 |
protuberance | 3.66e-07 | 6 |
pharyngeal arch | 3.66e-07 | 6 |
embryonic head | 3.66e-07 | 6 |
respiratory system | 8.32e-07 | 74 |
mouth mucosa | 9.06e-07 | 13 |