FFCP PHASE1:Hg19::chr18:23751305..23751327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000307796_5end | |association_with_transcript=0bp_to_ENST00000307796_5end | ||
|cluster_id=chr18:23751305..23751327,- | |||
|coexpression_cluster_id=C600 | |coexpression_cluster_id=C600 | ||
|description=CAGE_peak_1_at_ENST00000307796_5end | |description=CAGE_peak_1_at_ENST00000307796_5end | ||
|id=chr18:23751305..23751327,- | |id=chr18:23751305..23751327,- | ||
|ontology_enrichment_celltype=CL:0000764;7.05e-18;2!CL:0000558;7.05e-18;2!CL:0000540;2.06e-12;6!CL:0000404;2.06e-12;6!CL:0000817;3.12e-09;1 | |ontology_enrichment_celltype=CL:0000012!2.06e-07!682;CL:0000548!3.55e-07!679;CL:0000004!3.55e-07!679;CL:0000255!3.55e-07!679 | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;7.05e-18;2!CL:0000558;7.05e-18;2!CL:0000540;2.06e-12;6!CL:0000404;2.06e-12;6!CL:0000817;3.12e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000764,7.07e-18,2;CL:0000765,7.07e-18,2;CL:0000050,7.07e-18,2;CL:0000038,7.07e-18,2;CL:0000558,7.07e-18,2;CL:0000547,7.07e-18,2;CL:0000549,7.07e-18,2;CL:0000550,7.07e-18,2;CL:0000552,7.07e-18,2;CL:0000540,1.60e-12,6;CL:0000031,1.60e-12,6;CL:0000404,1.60e-12,6;CL:0000047,1.60e-09,8 | ||
|ontology_enrichment_uberon=UBERON:0001737;5.20e-71;9!UBERON:0001557;5.20e-71;9!UBERON:0000072;2.18e-15;37!UBERON:0000065;5.90e-13;44!UBERON:0001004;6.53e-07;65 | |ontology_enrichment_development_v019=UBERON:0008947;3.40e-21;29!CL:0000031;2.06e-12;6 | ||
|ontology_enrichment_disease=DOID:162!2.47e-15!235;DOID:14566!5.88e-15!239;DOID:2531!1.33e-11!51;DOID:0060083!1.33e-11!51;DOID:1240!3.09e-11!39;DOID:8692!3.98e-10!31;DOID:305!2.67e-07!106;DOID:0050687!5.27e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.27e-11!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.20e-71;9!UBERON:0001557;5.20e-71;9!UBERON:0000072;2.18e-15;37!UBERON:0000065;5.90e-13;44!UBERON:0001004;6.53e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.86e-71,9;UBERON:0001557,3.89e-33,19;UBERON:0008947,6.35e-16,38;UBERON:0003258,6.35e-16,38;UBERON:0000072,1.28e-12,47;UBERON:0000065,8.24e-11,54;UBERON:0001004,1.58e-07,74 | |||
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| ||
|short_description=p1@ENST00000307796 | |short_description=p1@ENST00000307796 | ||
}} | }} |
Latest revision as of 00:06, 26 July 2015
Short description: | p1@ENST00000307796 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000307796_5end |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | 0bp_to_ENST00000307796_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.07e-18 | 2 |
erythroblast | 7.07e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 7.07e-18 | 2 |
erythroid progenitor cell | 7.07e-18 | 2 |
reticulocyte | 7.07e-18 | 2 |
proerythroblast | 7.07e-18 | 2 |
basophilic erythroblast | 7.07e-18 | 2 |
polychromatophilic erythroblast | 7.07e-18 | 2 |
orthochromatic erythroblast | 7.07e-18 | 2 |
neuron | 1.60e-12 | 6 |
neuroblast | 1.60e-12 | 6 |
electrically signaling cell | 1.60e-12 | 6 |
neuronal stem cell | 1.60e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.86e-71 | 9 |
upper respiratory tract | 3.89e-33 | 19 |
respiratory primordium | 6.35e-16 | 38 |
endoderm of foregut | 6.35e-16 | 38 |
segment of respiratory tract | 1.28e-12 | 47 |
respiratory tract | 8.24e-11 | 54 |
respiratory system | 1.58e-07 | 74 |