FFCP PHASE1:Hg19::chr18:28621487..28621504,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:28621487..28621504,+ | |||
|description=CAGE_peak_at_chr18:28621487..28621504,+ | |||
|id=chr18:28621487..28621504,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.05e-11!19;CL:0000066!1.32e-10!254;CL:0000076!8.63e-09!62 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.83e-23;3!CL:0002588;4.07e-16;2!CL:0002623;1.31e-11;3!CL:0000077;4.66e-10;19!CL:0000349;6.54e-10;19!CL:0002557;2.82e-09;1!CL:0002568;6.46e-09;1!CL:0000150;1.38e-08;9!CL:0000622;2.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.73e-23,3;CL:0002588,6.98e-16,2;CL:0002623,1.34e-11,3;CL:0000077,4.90e-10,19;CL:0000349,5.51e-10,19;CL:0002557,3.31e-09,1;CL:0002568,3.88e-09,1;CL:0000150,1.40e-08,9;CL:0000622,2.70e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.81e-09;1!DOID:3151;6.46e-09;1!DOID:3149;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.74e-09,1;DOID:3151,1.16e-08,1;DOID:3149,1.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.10e-09!14;UBERON:0000158!2.10e-09!14;UBERON:0000481!2.30e-08!347;UBERON:0000478!2.42e-08!24;UBERON:0007625!8.82e-08!11;UBERON:0000064!1.79e-07!219;UBERON:0001444!2.41e-07!48;UBERON:0000019!2.74e-07!19;UBERON:0000047!2.74e-07!19;UBERON:0004088!2.74e-07!19;UBERON:0003072!2.74e-07!19;UBERON:0003071!2.74e-07!19;UBERON:0004128!2.74e-07!19;UBERON:0001987!4.19e-07!4;UBERON:0004340!4.19e-07!4;UBERON:0005085!4.89e-07!29;UBERON:0000020!8.34e-07!23;UBERON:0000970!8.43e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.28e-17;4!UBERON:0000478;8.31e-08;24!UBERON:0000077;5.62e-07;27!UBERON:0002066;5.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.25e-17,4;UBERON:0004340,1.25e-17,4;UBERON:0003124,2.57e-10,7;UBERON:0005631,5.66e-09,14;UBERON:0000158,5.66e-09,14;UBERON:0000478,7.27e-08,24;UBERON:0002066,6.97e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.933633106199299,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04177929688038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.6462960453256,0,0,0,0,0,0,0.171567810298526,0.768251997860379,0,0.100528972411631,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.985143749731331,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68053230485111,0,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.656029291399411,1.95227036798582,0,0,0,0,0.650060246036521,0,0,0,0,0.413509717453592,0.429680979473094,0.145016693914229,0,0,0.330569830721956,0.192190067365106,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0.38126038784765,0.255897791311334,0,0,0,0.719489830333259,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,1.29070216983646,1.3754865741837,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.307160702099232,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0,0.979923974143776,0.0870592065804026,0,4.29965081179041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916292769327325,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.599037001496973,0,0,0.403100834920358,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,4.11841312425685,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0.829412415681711,0,0,0.300515217994437,0.761610424337591,0,0,0.644463342254931,0,0.796191777397232,0,0,0,0,0,8.14878047224718,1.56596575179127,0.226705925512272,0.926089897295336,0,0.179088841081487,0,1.31570429747224,0.353378291891762,2.12205442098006,0,0,1.38172136692479,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.462102664601353,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,2.11339663594931,0.078493092850514,0,3.08299379645168,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,3.414369541879,2.07377898544228,0,0,0,0,1.60374807980835,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.248298857183432,0.33639558774184,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,1.3874554964103,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:28621487..28621504,+ | |||
}} |
Latest revision as of 00:17, 26 July 2015
Short description: | p@chr18:28621487..28621504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:28621487..28621504, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.73e-23 | 3 |
smooth muscle cell of the umbilical vein | 6.98e-16 | 2 |
acinar cell of salivary gland | 1.34e-11 | 3 |
mesothelial cell | 4.90e-10 | 19 |
extraembryonic cell | 5.51e-10 | 19 |
fibroblast of pulmonary artery | 3.31e-09 | 1 |
mesenchymal stem cell of Wharton's jelly | 3.88e-09 | 1 |
glandular epithelial cell | 1.40e-08 | 9 |
acinar cell | 2.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.25e-17 | 4 |
allantois | 1.25e-17 | 4 |
chorion | 2.57e-10 | 7 |
extraembryonic membrane | 5.66e-09 | 14 |
membranous layer | 5.66e-09 | 14 |
extraembryonic structure | 7.27e-08 | 24 |
umbilical vein | 6.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.74e-09 | 1 |
skin squamous cell carcinoma | 1.16e-08 | 1 |
keratoacanthoma | 1.16e-08 | 1 |