FFCP PHASE1:Hg19::chr18:3449633..3449649,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:3449633..3449649,- | |||
|coexpression_cluster_id=C3173 | |coexpression_cluster_id=C3173 | ||
|description=CAGE_peak_at_chr18:3449633..3449649,- | |description=CAGE_peak_at_chr18:3449633..3449649,- | ||
|id=chr18:3449633..3449649,- | |id=chr18:3449633..3449649,- | ||
|ontology_enrichment_celltype=CL:0002057!2.23e-17!42;CL:0000860!2.74e-17!45;CL:0002031!1.11e-14!124;CL:0002087!1.30e-12!119;CL:0000738!2.30e-12!140;CL:0000791!3.76e-10!18;CL:0000789!3.76e-10!18;CL:0002420!3.76e-10!18;CL:0002419!3.76e-10!18;CL:0000790!3.76e-10!18;CL:0000839!2.45e-08!70;CL:0000037!3.20e-08!172;CL:0000566!3.20e-08!172;CL:0000557!9.83e-08!71;CL:0002032!1.16e-07!165;CL:0000837!1.16e-07!165;CL:0000988!3.24e-07!182;CL:0002009!6.87e-07!65 | |ontology_enrichment_celltype=CL:0002057!2.23e-17!42;CL:0000860!2.74e-17!45;CL:0002031!1.11e-14!124;CL:0002087!1.30e-12!119;CL:0000738!2.30e-12!140;CL:0000791!3.76e-10!18;CL:0000789!3.76e-10!18;CL:0002420!3.76e-10!18;CL:0002419!3.76e-10!18;CL:0000790!3.76e-10!18;CL:0000839!2.45e-08!70;CL:0000037!3.20e-08!172;CL:0000566!3.20e-08!172;CL:0000557!9.83e-08!71;CL:0002032!1.16e-07!165;CL:0000837!1.16e-07!165;CL:0000988!3.24e-07!182;CL:0002009!6.87e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-23;33!CL:0002057;1.18e-23;33!CL:0000473;1.47e-15;39!CL:0000234;1.47e-15;39!CL:0000791;2.93e-13;18!CL:0000789;2.93e-13;18!CL:0002419;2.93e-13;18!CL:0000624;4.51e-13;6!CL:0000576;1.31e-12;48!CL:0000766;6.37e-09;69!CL:0000084;1.06e-08;25!CL:0002087;3.89e-08;104!CL:0000542;1.48e-07;53!CL:0000898;1.49e-07;3!CL:0000236;6.16e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.13e-31,120;CL:0002087,6.16e-26,115;CL:0000738,7.84e-26,136;CL:0000860,2.86e-24,42;CL:0002057,2.86e-24,42;CL:0000839,1.13e-20,66;CL:0002032,1.86e-20,161;CL:0000837,1.86e-20,161;CL:0000473,3.04e-20,48;CL:0000234,3.04e-20,48;CL:0000037,5.52e-20,168;CL:0000988,4.34e-19,177;CL:0000557,2.17e-17,67;CL:0000766,1.33e-15,72;CL:0002194,1.15e-14,59;CL:0000576,1.15e-14,59;CL:0000040,1.15e-14,59;CL:0000559,1.15e-14,59;CL:0002009,5.92e-14,61;CL:0000791,1.30e-13,18;CL:0000789,1.30e-13,18;CL:0002420,1.30e-13,18;CL:0002419,1.30e-13,18;CL:0000790,1.30e-13,18;CL:0000624,4.92e-13,6;CL:0000838,1.47e-11,52;CL:0000542,3.15e-11,53;CL:0000051,3.15e-11,53;CL:0000763,5.18e-10,108;CL:0000049,5.18e-10,108;CL:0000048,2.35e-09,427;CL:0000723,5.86e-09,433;CL:0000084,6.13e-09,25;CL:0000827,6.13e-09,25;CL:0000134,7.66e-09,354;CL:0000034,1.90e-08,441;CL:0002320,2.38e-08,361;CL:0000898,1.35e-07,3;CL:0000219,3.94e-07,386;CL:0000097,9.39e-07,5;CL:0002028,9.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-16;42!CL:0000790;2.93e-13;18!CL:0000051;1.48e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.78e-07!216 | |ontology_enrichment_uberon=UBERON:0003081!1.78e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-14,76;UBERON:0001474,8.02e-14,82;UBERON:0004765,7.47e-12,90;UBERON:0002405,2.61e-11,93;UBERON:0002390,3.15e-11,98;UBERON:0003061,3.15e-11,98;UBERON:0003081,3.84e-10,203;UBERON:0001434,7.31e-10,100;UBERON:0002193,2.00e-09,108;UBERON:0002204,7.63e-08,167;UBERON:0002384,1.10e-07,371 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0.662794751455832,0,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.940364164434263,0.85870796139317,0.547497700291537,0.125542639594803,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0,0.587200878669695,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0.872389432677388,0.755751887377619,1.21292030593908,1.85943229524548,1.23350366406548,1.54853185447552,1.1507695692886,1.7931249457037,4.49316236788312,1.72372840368309,5.80936215225443,8.12558919566051,0.941211697713023,1.91034305040492,2.24723484445085,3.97909060082173,4.49300637906531,5.11469700639233,0.329851300186716,1.19678194572979,1.27867425159808,0.870627715885752,1.70215567407342,3.73693349397345,3.26623264833766,2.60741459210101,3.9093992046921,0,0.736555271975129,2.53169909952708,0.422510572623884,1.06302149982522,0.628975936525128,0.112328631146495,0,0.16072558669708,2.28010194992999,0.79566670879636,0.730656615058536,5.27988733383968,2.18455444504853,0.889509253863555,2.98711155796555,2.80277190925209,3.4485146397269,2.64417949113945,3.81621501814146,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0.790152254325231,3.34406609193516,3.14408610199332,3.49522548299166,0.167186495390678,10.7554347989085,7.57516489175573,13.6378709885538,0.668462741311041,3.82987679717288,3.1014745241707,0.812411591295047,0,0.130059347559878,0,0.552700035571697,0.579606171470105,6.67289534229272,3.74557159325598,7.31748666634838,0.339928028092699,11.1133943144557,4.46715679127419,3.79529538029254,0.318565414324097,1.30216690771284,1.90090408889675,0.903450714466637,0.383959833463255,1.24930726552346,0.947109008176067,1.64225599384209,1.61285394579786,0.802320587350522,2.60683926989038,2.43806866313962,0,0.383587685530591,0,0,0,0,2.43317435151318,0.661743720148475,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0.79504962946682,0.860234595106124,0.694281003215189,0.56530794192401,0,0.550236083880135,1.25396979922086,0,0,0,0.402829317109147,0,0.732186172644509,1.10298924103761,0.81014194788176,0,1.12264686313085,0.225222960966644,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0.25326102332916,1.32409180813219,2.0078563452417,0.354668382198357,1.12135520028461,3.20246987189115,0.24666754841716,0,0.269421344139376,0.653847612453835,0.454072282934794,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,0.910161361938026,0,0.168336113954066,0.500474079487857,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.794025282120147,0.179389635688862,0.213557388818567,0,0.300091096084402,0.515262646192195,0.515281080091258,0,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0.72995471815166,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.463721619900307,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,2.46331618947972,0,1.65862492432618,4.32359860250884,2.39860623510122,0.063497894292169,0,0,3.4214489204541,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0.129271715757778,7.15312891703765,0.845302752556,0,0,0,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.716243852959582,0.560425719967636,0.985153801009636,2.15627574859517,2.56686072559497,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,0,0.157702415033935,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0.173767228936166,0,0,0.82707210449155,1.72571360654893,0.853820462427555,0.606255142892519,0,0.604780586659361,0,0.306923946576125,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0,0,0,0.519254429183621,0.116210378459959,0.483437798366489,0,0,0,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,1.46139224653261,0,2.27466768141793,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,1.53481913652154,1.3071772551245,0.512900250232778,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0.676695028044854,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,1.4245125703478,0,0,0.127612712494584,0,0,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0,0,0.316379424718726,0,1.02359116524534,0,2.22742273548156,0.78494864019923,0.359744915166629,0,0.353437207037059,0,3.17020642346017,0,0.48763373908959,0.487426979262569,1.05650146756755,0.272999822815972,0,1.13008116620243,1.65409603063837,0,0.438450885253763,0.578775534266688,1.31178950409327,0.608731130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| ||
|short_description=p@chr18:3449633..3449649,- | |short_description=p@chr18:3449633..3449649,- | ||
}} | }} |
Latest revision as of 00:42, 26 July 2015
Short description: | p@chr18:3449633..3449649, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3449633..3449649, - |
Coexpression cluster: | C3173_CD4_CD14_CD8_Natural_Peripheral_Chondrocyte_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-14 | 76 |
bone element | 8.02e-14 | 82 |
skeletal element | 7.47e-12 | 90 |
immune system | 2.61e-11 | 93 |
hematopoietic system | 3.15e-11 | 98 |
blood island | 3.15e-11 | 98 |
lateral plate mesoderm | 3.84e-10 | 203 |
skeletal system | 7.31e-10 | 100 |
hemolymphoid system | 2.00e-09 | 108 |
musculoskeletal system | 7.63e-08 | 167 |
connective tissue | 1.10e-07 | 371 |