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FFCP PHASE1:Hg19::chr18:5466317..5466374,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr18:5466317..5466374,-
|coexpression_cluster_id=C0
|description=CAGE_peak_at_chr18:5466317..5466374,-
|description=CAGE_peak_at_chr18:5466317..5466374,-
|id=chr18:5466317..5466374,-
|id=chr18:5466317..5466374,-
|ontology_enrichment_celltype=CL:0002009!7.12e-68!65;CL:0002057!6.23e-66!42;CL:0002194!2.45e-65!63;CL:0000576!2.45e-65!63;CL:0000040!2.45e-65!63;CL:0000559!2.45e-65!63;CL:0000557!1.01e-62!71;CL:0000860!1.81e-60!45;CL:0000766!3.35e-60!76;CL:0000839!4.23e-59!70;CL:0000763!4.82e-55!112;CL:0000049!4.82e-55!112;CL:0000738!9.07e-39!140;CL:0000037!1.15e-38!172;CL:0000566!1.15e-38!172;CL:0002087!8.33e-37!119;CL:0002032!5.17e-36!165;CL:0000837!5.17e-36!165;CL:0000988!3.38e-35!182;CL:0002031!3.28e-34!124;CL:0002393!6.80e-14!9;CL:0002397!6.80e-14!9;CL:0000134!4.36e-11!358;CL:0002320!1.90e-10!365;CL:0000990!1.35e-09!8;CL:0000840!5.86e-09!5;CL:0001029!5.86e-09!5;CL:0000219!1.23e-08!390;CL:0000451!1.49e-07!10
|ontology_enrichment_celltype=CL:0002009!7.12e-68!65;CL:0002057!6.23e-66!42;CL:0002194!2.45e-65!63;CL:0000576!2.45e-65!63;CL:0000040!2.45e-65!63;CL:0000559!2.45e-65!63;CL:0000557!1.01e-62!71;CL:0000860!1.81e-60!45;CL:0000766!3.35e-60!76;CL:0000839!4.23e-59!70;CL:0000763!4.82e-55!112;CL:0000049!4.82e-55!112;CL:0000738!9.07e-39!140;CL:0000037!1.15e-38!172;CL:0000566!1.15e-38!172;CL:0002087!8.33e-37!119;CL:0002032!5.17e-36!165;CL:0000837!5.17e-36!165;CL:0000988!3.38e-35!182;CL:0002031!3.28e-34!124;CL:0002393!6.80e-14!9;CL:0002397!6.80e-14!9;CL:0000134!4.36e-11!358;CL:0002320!1.90e-10!365;CL:0000990!1.35e-09!8;CL:0000840!5.86e-09!5;CL:0001029!5.86e-09!5;CL:0000219!1.23e-08!390;CL:0000451!1.49e-07!10
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-84;33!CL:0002057;2.57e-84;33!CL:0000473;1.74e-72;39!CL:0000234;1.74e-72;39!CL:0000576;3.20e-61;48!CL:0000766;1.83e-43;69!CL:0000763;1.52e-25;100!CL:0002393;1.10e-16;6!CL:0002397;1.10e-16;6!CL:0002087;1.46e-15;104!CL:0000738;4.00e-13;136!CL:0000988;1.60e-09;177!CL:0000767;3.46e-09;3!CL:0000226;1.56e-08;3!CL:0000842;1.56e-08;3!CL:0000875;2.88e-08;3!CL:0002396;2.88e-08;3!CL:0000235;3.60e-07;6!CL:0000840;5.62e-07;5!CL:0000990;7.15e-07;8
|ontology_enrichment_celltype_v019_2=CL:0000473,8.14e-120,48;CL:0000234,8.14e-120,48;CL:0000860,6.93e-116,42;CL:0002057,6.93e-116,42;CL:0002194,1.82e-110,59;CL:0000576,1.82e-110,59;CL:0000040,1.82e-110,59;CL:0000559,1.82e-110,59;CL:0002009,1.77e-106,61;CL:0000766,2.11e-100,72;CL:0000839,1.50e-97,66;CL:0000557,6.37e-96,67;CL:0000763,1.26e-88,108;CL:0000049,1.26e-88,108;CL:0002087,3.41e-60,115;CL:0000037,4.45e-60,168;CL:0000738,9.52e-58,136;CL:0002032,7.00e-57,161;CL:0000837,7.00e-57,161;CL:0000988,2.76e-56,177;CL:0002031,2.66e-50,120;CL:0002393,2.45e-23,9;CL:0002397,2.45e-23,9;CL:0000134,1.01e-20,354;CL:0002320,4.99e-20,361;CL:0000219,1.37e-17,386;CL:0000048,1.32e-14,427;CL:0000034,1.88e-14,441;CL:0000723,3.41e-14,433;CL:0000767,3.37e-09,3;CL:0000226,1.81e-08,3;CL:0000842,1.81e-08,3;CL:0000875,2.24e-08,3;CL:0002396,2.24e-08,3;CL:0000235,3.83e-07,6;CL:0000840,4.78e-07,5;CL:0001029,4.78e-07,5;CL:0000990,6.37e-07,8
|ontology_enrichment_development_v019=CL:0002057;2.77e-82;42!CL:0000049;3.10e-25;108
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!1.12e-57!80;UBERON:0001474!2.80e-52!86;UBERON:0002390!2.68e-51!102;UBERON:0003061!2.68e-51!102;UBERON:0002193!1.44e-49!112;UBERON:0002405!2.01e-42!115;UBERON:0004765!1.32e-41!101;UBERON:0001434!1.32e-41!101;UBERON:0003081!1.14e-18!216;UBERON:0002204!8.17e-18!167;UBERON:0002384!1.38e-09!375;UBERON:0000062!1.84e-07!511
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-83,76;UBERON:0001474,3.28e-76,82;UBERON:0002390,4.70e-70,98;UBERON:0003061,4.70e-70,98;UBERON:0004765,2.34e-68,90;UBERON:0002405,9.35e-66,93;UBERON:0002193,2.21e-62,108;UBERON:0001434,2.74e-60,100;UBERON:0002204,4.76e-31,167;UBERON:0003081,4.71e-27,203;UBERON:0002384,4.39e-19,371;UBERON:0000926,2.38e-14,315;UBERON:0004120,2.38e-14,315;UBERON:0006603,2.38e-14,315
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|short_description=p@chr18:5466317..5466374,-
|short_description=p@chr18:5466317..5466374,-
}}
}}

Latest revision as of 01:28, 26 July 2015

Short description:p@chr18:5466317..5466374, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr18:5466317..5466374, -
Coexpression cluster:C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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