FFCP PHASE1:Hg19::chr18:61166381..61166404,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61166381..61166404,- | |||
|coexpression_cluster_id=C1445 | |coexpression_cluster_id=C1445 | ||
|description=CAGE_peak_at_chr18:61166381..61166404,- | |description=CAGE_peak_at_chr18:61166381..61166404,- | ||
|id=chr18:61166381..61166404,- | |id=chr18:61166381..61166404,- | ||
|ontology_enrichment_celltype=CL:0000066!3.65e-29!254;CL:0002076!1.79e-26!43;CL:0000223!7.34e-19!59;CL:0002251!4.63e-15!21;CL:0002368!1.55e-13!13;CL:0002202!3.37e-12!9;CL:0002632!3.37e-12!9;CL:0002159!1.69e-10!13;CL:0002328!5.45e-08!3;CL:0002621!7.01e-08!3;CL:0000068!7.51e-08!3;CL:0000069!7.51e-08!3;CL:0000307!7.51e-08!3;CL:0002150!7.51e-08!3;CL:0000377!7.51e-08!3;CL:0000861!7.51e-08!3;CL:0002166!2.40e-07!3;CL:0000076!4.09e-07!62;CL:0000240!6.43e-07!6;CL:0000311!6.43e-07!6;CL:0000079!6.43e-07!6;CL:0000237!6.43e-07!6;CL:0000036!6.43e-07!6;CL:0000357!6.43e-07!6;CL:0000114!6.43e-07!6 | |ontology_enrichment_celltype=CL:0000066!3.65e-29!254;CL:0002076!1.79e-26!43;CL:0000223!7.34e-19!59;CL:0002251!4.63e-15!21;CL:0002368!1.55e-13!13;CL:0002202!3.37e-12!9;CL:0002632!3.37e-12!9;CL:0002159!1.69e-10!13;CL:0002328!5.45e-08!3;CL:0002621!7.01e-08!3;CL:0000068!7.51e-08!3;CL:0000069!7.51e-08!3;CL:0000307!7.51e-08!3;CL:0002150!7.51e-08!3;CL:0000377!7.51e-08!3;CL:0000861!7.51e-08!3;CL:0002166!2.40e-07!3;CL:0000076!4.09e-07!62;CL:0000240!6.43e-07!6;CL:0000311!6.43e-07!6;CL:0000079!6.43e-07!6;CL:0000237!6.43e-07!6;CL:0000036!6.43e-07!6;CL:0000357!6.43e-07!6;CL:0000114!6.43e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.17e-20;13!CL:0000240;2.11e-16;6!CL:0000311;2.11e-16;6!CL:0000079;2.11e-16;6!CL:0000237;2.11e-16;6!CL:0002328;4.93e-15;3!CL:0002076;1.87e-14;42!CL:0002327;7.36e-12;4!CL:0002336;1.01e-11;1!CL:0002261;1.01e-11;1!CL:0002170;1.01e-11;1!CL:0002202;3.37e-11;9!CL:0002632;3.37e-11;9!CL:0000362;3.94e-11;9!CL:0000312;1.87e-09;5!CL:0000622;3.04e-09;5!CL:0000154;7.58e-08;6!CL:0002159;2.46e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.86e-20,13;CL:0002076,5.47e-19,42;CL:0000240,2.00e-16,6;CL:0000311,2.00e-16,6;CL:0000079,2.00e-16,6;CL:0000237,2.00e-16,6;CL:0000036,2.00e-16,6;CL:0000357,2.00e-16,6;CL:0000114,2.00e-16,6;CL:0002328,3.22e-15,3;CL:0000223,1.92e-13,58;CL:0002336,6.26e-12,1;CL:0002261,6.26e-12,1;CL:0002170,6.26e-12,1;CL:0002327,7.37e-12,4;CL:0002202,2.79e-11,9;CL:0002632,2.79e-11,9;CL:0000362,4.69e-11,9;CL:0000066,1.31e-09,253;CL:0000312,2.17e-09,5;CL:0000622,3.59e-09,5;CL:0000154,8.71e-08,6;CL:0002159,2.74e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;2.11e-16;6!CL:0000114;2.11e-16;6!CL:0000223;4.13e-07;58 | |||
|ontology_enrichment_disease=DOID:305!8.53e-21!106;DOID:1749!1.57e-19!14;DOID:0050687!1.85e-14!143;DOID:162!5.79e-07!235 | |ontology_enrichment_disease=DOID:305!8.53e-21!106;DOID:1749!1.57e-19!14;DOID:0050687!1.85e-14!143;DOID:162!5.79e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.66e-24!72;UBERON:0004119!8.47e-22!169;UBERON:0000925!8.47e-22!169;UBERON:0006595!8.47e-22!169;UBERON:0000065!3.86e-19!53;UBERON:0001007!6.75e-19!155;UBERON:0001555!6.75e-19!155;UBERON:0007026!6.75e-19!155;UBERON:0000072!7.97e-19!46;UBERON:0000077!2.23e-17!130;UBERON:0001557!3.71e-16!19;UBERON:0001737!6.25e-15!9;UBERON:0008947!2.11e-14!38;UBERON:0003258!2.11e-14!38;UBERON:0000161!1.07e-13!35;UBERON:0001041!1.19e-13!98;UBERON:0004921!2.20e-13!129;UBERON:0004185!2.20e-13!129;UBERON:0000166!1.48e-12!21;UBERON:0003729!7.52e-11!5;UBERON:0000165!1.69e-10!28;UBERON:0000930!1.69e-10!28;UBERON:0000344!5.55e-10!12;UBERON:0007196!2.31e-09!14;UBERON:0001558!2.31e-09!14;UBERON:0003343!1.27e-08!4;UBERON:0004785!1.27e-08!4;UBERON:0004815!5.45e-08!3;UBERON:0002031!5.45e-08!3;UBERON:0001949!7.01e-08!3;UBERON:0000063!2.22e-07!97;UBERON:0005153!2.51e-07!37;UBERON:0003102!3.03e-07!95;UBERON:0005911!5.84e-07!82;UBERON:0002294!6.04e-07!7;UBERON:0001173!6.04e-07!7;UBERON:0004912!6.04e-07!7;UBERON:0000062!7.47e-07!511;UBERON:0001723!7.99e-07!3;UBERON:0001033!7.99e-07!3;UBERON:0010056!7.99e-07!3;UBERON:0005178!8.45e-07!34;UBERON:0002224!8.45e-07!34;UBERON:0002110!9.25e-07!3;UBERON:0006242!9.25e-07!3 | |ontology_enrichment_uberon=UBERON:0001004!1.66e-24!72;UBERON:0004119!8.47e-22!169;UBERON:0000925!8.47e-22!169;UBERON:0006595!8.47e-22!169;UBERON:0000065!3.86e-19!53;UBERON:0001007!6.75e-19!155;UBERON:0001555!6.75e-19!155;UBERON:0007026!6.75e-19!155;UBERON:0000072!7.97e-19!46;UBERON:0000077!2.23e-17!130;UBERON:0001557!3.71e-16!19;UBERON:0001737!6.25e-15!9;UBERON:0008947!2.11e-14!38;UBERON:0003258!2.11e-14!38;UBERON:0000161!1.07e-13!35;UBERON:0001041!1.19e-13!98;UBERON:0004921!2.20e-13!129;UBERON:0004185!2.20e-13!129;UBERON:0000166!1.48e-12!21;UBERON:0003729!7.52e-11!5;UBERON:0000165!1.69e-10!28;UBERON:0000930!1.69e-10!28;UBERON:0000344!5.55e-10!12;UBERON:0007196!2.31e-09!14;UBERON:0001558!2.31e-09!14;UBERON:0003343!1.27e-08!4;UBERON:0004785!1.27e-08!4;UBERON:0004815!5.45e-08!3;UBERON:0002031!5.45e-08!3;UBERON:0001949!7.01e-08!3;UBERON:0000063!2.22e-07!97;UBERON:0005153!2.51e-07!37;UBERON:0003102!3.03e-07!95;UBERON:0005911!5.84e-07!82;UBERON:0002294!6.04e-07!7;UBERON:0001173!6.04e-07!7;UBERON:0004912!6.04e-07!7;UBERON:0000062!7.47e-07!511;UBERON:0001723!7.99e-07!3;UBERON:0001033!7.99e-07!3;UBERON:0010056!7.99e-07!3;UBERON:0005178!8.45e-07!34;UBERON:0002224!8.45e-07!34;UBERON:0002110!9.25e-07!3;UBERON:0006242!9.25e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.93e-15;3!UBERON:0002031;4.93e-15;3!UBERON:0001911;7.36e-12;4!UBERON:0002185;2.17e-09;5!UBERON:0000485;6.02e-07;7!UBERON:0007196;6.43e-07;15!UBERON:0001558;6.43e-07;15!UBERON:0001003;7.05e-07;15!UBERON:0007376;7.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.22e-15,3;UBERON:0002031,3.22e-15,3;UBERON:0001911,7.37e-12,4;UBERON:0005333,7.37e-12,4;UBERON:0008425,7.37e-12,4;UBERON:0005311,7.37e-12,4;UBERON:0002185,1.69e-09,5;UBERON:0001004,4.05e-08,74;UBERON:0005153,4.33e-07,37;UBERON:0007196,5.75e-07,15;UBERON:0001558,5.75e-07,15;UBERON:0001003,7.81e-07,15;UBERON:0007376,7.81e-07,15;UBERON:0007383,7.81e-07,15 | |||
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| ||
|short_description=p@chr18:61166381..61166404,- | |short_description=p@chr18:61166381..61166404,- | ||
}} | }} |
Latest revision as of 01:51, 26 July 2015
Short description: | p@chr18:61166381..61166404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61166381..61166404, - |
Coexpression cluster: | C1445_Mammary_Keratinocyte_Small_Urothelial_nasal_Gingival_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.86e-20 | 13 |
endo-epithelial cell | 5.47e-19 | 42 |
stratified squamous epithelial cell | 2.00e-16 | 6 |
keratin accumulating cell | 2.00e-16 | 6 |
stratified epithelial cell | 2.00e-16 | 6 |
keratinizing barrier epithelial cell | 2.00e-16 | 6 |
epithelial fate stem cell | 2.00e-16 | 6 |
stratified epithelial stem cell | 2.00e-16 | 6 |
surface ectodermal cell | 2.00e-16 | 6 |
bronchial epithelial cell | 3.22e-15 | 3 |
endodermal cell | 1.92e-13 | 58 |
buccal mucosa cell | 6.26e-12 | 1 |
endothelial cell of viscerocranial mucosa | 6.26e-12 | 1 |
keratinized cell of the oral mucosa | 6.26e-12 | 1 |
mammary gland epithelial cell | 7.37e-12 | 4 |
epithelial cell of tracheobronchial tree | 2.79e-11 | 9 |
epithelial cell of lower respiratory tract | 2.79e-11 | 9 |
epidermal cell | 4.69e-11 | 9 |
epithelial cell | 1.31e-09 | 253 |
keratinocyte | 2.17e-09 | 5 |
acinar cell | 3.59e-09 | 5 |
protein secreting cell | 8.71e-08 | 6 |
general ecto-epithelial cell | 2.74e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.22e-15 | 3 |
epithelium of bronchus | 3.22e-15 | 3 |
mammary gland | 7.37e-12 | 4 |
mammary bud | 7.37e-12 | 4 |
mammary ridge | 7.37e-12 | 4 |
mammary placode | 7.37e-12 | 4 |
bronchus | 1.69e-09 | 5 |
respiratory system | 4.05e-08 | 74 |
epithelial bud | 4.33e-07 | 37 |
tracheobronchial tree | 5.75e-07 | 15 |
lower respiratory tract | 5.75e-07 | 15 |
skin epidermis | 7.81e-07 | 15 |
outer epithelium | 7.81e-07 | 15 |
enveloping layer of ectoderm | 7.81e-07 | 15 |