FFCP PHASE1:Hg19::chr18:61214131..61214139,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61214131..61214139,+ | |||
|coexpression_cluster_id=C630 | |||
|description=CAGE_peak_at_chr18:61214131..61214139,+ | |description=CAGE_peak_at_chr18:61214131..61214139,+ | ||
|id=chr18:61214131..61214139,+ | |id=chr18:61214131..61214139,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.47e-17;1!UBERON:0004874;7.57e-17;1!UBERON:0008814;7.49e-09;2!UBERON:0010056;7.49e-09;2!UBERON:0005795;5.03e-07;10 | |||
|ontology_enrichment_disease=DOID:3371!1.05e-08!1;DOID:4549!1.05e-08!1;DOID:5861!1.05e-08!1;DOID:6496!1.05e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;5.53e-17;1!DOID:4549;5.53e-17;1!DOID:5861;5.53e-17;1!DOID:6496;5.53e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.53e-17,1;DOID:4549,5.53e-17,1;DOID:5861,5.53e-17,1;DOID:6496,5.53e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.96e-17!10;UBERON:0009145!1.96e-17!10;UBERON:0006562!7.77e-16!11;UBERON:0001557!1.02e-12!19;UBERON:0001723!2.47e-10!3;UBERON:0001033!2.47e-10!3;UBERON:0010056!2.47e-10!3;UBERON:0004177!1.72e-09!7;UBERON:0000989!1.22e-08!1;UBERON:0008811!1.22e-08!1;UBERON:0006258!1.22e-08!1;UBERON:0005876!1.22e-08!1;UBERON:0004874!1.22e-08!1;UBERON:0007029!1.31e-08!1;UBERON:0006834!1.41e-08!1;UBERON:0002372!3.57e-08!1;UBERON:0001961!3.57e-08!1;UBERON:0001744!3.57e-08!1;UBERON:0001735!3.57e-08!1;UBERON:0002370!4.42e-08!4;UBERON:0005058!4.42e-08!4;UBERON:0009113!4.42e-08!4;UBERON:0003295!4.42e-08!4;UBERON:0005562!4.42e-08!4;UBERON:0001301!5.82e-08!1;UBERON:0007023!9.51e-08!115;UBERON:0008814!9.96e-08!15;UBERON:0003408!6.71e-07!10;UBERON:0000974!6.99e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.74e-31;2!UBERON:0005058;3.74e-31;2!UBERON:0009113;3.74e-31;2!UBERON:0001723;5.47e-21;3!UBERON:0001033;5.47e-21;3!UBERON:0000989;7.57e-17;1!UBERON:0008811;7.57e-17;1!UBERON:0007029;9.58e-17;1!UBERON:0006834;9.58e-17;1!UBERON:0005795;2.25e-16;1!UBERON:0004177;4.25e-13;5!UBERON:0005057;4.25e-13;5!UBERON:0003127;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,2.31e-24,10;UBERON:0009145,2.31e-24,10;UBERON:0006562,3.45e-22,11;UBERON:0001723,7.42e-21,3;UBERON:0001033,7.42e-21,3;UBERON:0010056,7.42e-21,3;UBERON:0000989,7.57e-17,1;UBERON:0008811,7.57e-17,1;UBERON:0006258,7.57e-17,1;UBERON:0005876,7.57e-17,1;UBERON:0004874,7.57e-17,1;UBERON:0007029,8.86e-17,1;UBERON:0006834,1.04e-16,1;UBERON:0002370,3.59e-16,4;UBERON:0005058,3.59e-16,4;UBERON:0009113,3.59e-16,4;UBERON:0003295,3.59e-16,4;UBERON:0005562,3.59e-16,4;UBERON:0008814,1.04e-13,18;UBERON:0001557,5.25e-13,19;UBERON:0003351,4.16e-11,6;UBERON:0004177,1.18e-09,7;UBERON:0005057,1.18e-09,7;UBERON:0003127,6.94e-09,2;UBERON:0000072,4.84e-08,47;UBERON:0000974,5.11e-07,10;UBERON:0003408,5.11e-07,10;UBERON:0000065,5.41e-07,54;UBERON:0005795,7.03e-07,22 | |||
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|short_description=p@chr18:61214131..61214139,+ | |short_description=p@chr18:61214131..61214139,+ | ||
}} | }} |
Latest revision as of 01:51, 26 July 2015
Short description: | p@chr18:61214131..61214139, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61214131..61214139, + |
Coexpression cluster: | C630_cervix_uterus_salivary_extraskeletal_tongue_esophagus_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chordate pharynx | 2.31e-24 | 10 |
pharyngeal region of foregut | 2.31e-24 | 10 |
pharynx | 3.45e-22 | 11 |
tongue | 7.42e-21 | 3 |
gustatory system | 7.42e-21 | 3 |
future tongue | 7.42e-21 | 3 |
penis | 7.57e-17 | 1 |
intromittent organ | 7.57e-17 | 1 |
lateral plate mesenchyme | 7.57e-17 | 1 |
undifferentiated genital tubercle | 7.57e-17 | 1 |
somatopleure | 7.57e-17 | 1 |
surface | 8.86e-17 | 1 |
uterus or analog | 1.04e-16 | 1 |
thymus | 3.59e-16 | 4 |
hemolymphoid system gland | 3.59e-16 | 4 |
thymic region | 3.59e-16 | 4 |
pharyngeal gland | 3.59e-16 | 4 |
thymus primordium | 3.59e-16 | 4 |
pharyngeal arch system | 1.04e-13 | 18 |
upper respiratory tract | 5.25e-13 | 19 |
pharyngeal epithelium | 4.16e-11 | 6 |
hemopoietic organ | 1.18e-09 | 7 |
immune organ | 1.18e-09 | 7 |
open tracheal system trachea | 6.94e-09 | 2 |
segment of respiratory tract | 4.84e-08 | 47 |
neck | 5.11e-07 | 10 |
gland of gut | 5.11e-07 | 10 |
respiratory tract | 5.41e-07 | 54 |
embryonic uterus | 7.03e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.53e-17 | 1 |
extraosseous chondrosarcoma | 5.53e-17 | 1 |
myxoid chondrosarcoma | 5.53e-17 | 1 |
extraskeletal myxoid chondrosarcoma | 5.53e-17 | 1 |