FFCP PHASE1:Hg19::chr19:17417266..17417288,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:17417266..17417288,+ | |||
|description=CAGE_peak_at_chr19:17417266..17417288,+ | |description=CAGE_peak_at_chr19:17417266..17417288,+ | ||
|id=chr19:17417266..17417288,+ | |id=chr19:17417266..17417288,+ | ||
|ontology_enrichment_celltype=CL:0002591;1.65e-16;1!CL:0002262;6.42e-09;2!CL:0002545;6.42e-09;2!CL:1000398;6.42e-09;2!CL:0002363;6.42e-09;2!CL:0002617;6.42e-09;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002591;1.65e-16;1!CL:0002262;6.42e-09;2!CL:0002545;6.42e-09;2!CL:1000398;6.42e-09;2!CL:0002363;6.42e-09;2!CL:0002617;6.42e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002591,1.93e-16,1;CL:0002545,5.08e-09,2;CL:0002262,6.42e-09,2;CL:1000398,6.42e-09,2;CL:0002617,8.09e-09,2;CL:0002363,8.74e-09,2;CL:0000008,8.74e-09,2 | ||
|ontology_enrichment_uberon=UBERON:0002771;3.43e-09;2!UBERON:0001281;6.42e-09;2!UBERON:0003497;6.42e-09;2!UBERON:0003909;6.42e-09;2!UBERON:0005800;6.42e-09;2!UBERON:0003566;6.42e-09;2!UBERON:0000078;6.42e-09;2!UBERON:0003835;6.42e-09;2!UBERON:0001777;6.42e-09;2!UBERON:0001515;6.42e-09;2!UBERON:0002012;6.42e-09;2!UBERON:0008886;6.42e-09;2!UBERON:0010313;5.26e-07;10 | |ontology_enrichment_development_v019=CL:0000008;6.42e-09;2!UBERON:0008814;6.42e-09;2!UBERON:0010056;6.42e-09;2 | ||
|ontology_enrichment_disease=DOID:14566!6.33e-07!239;DOID:162!6.71e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.43e-09;2!UBERON:0001281;6.42e-09;2!UBERON:0003497;6.42e-09;2!UBERON:0003909;6.42e-09;2!UBERON:0005800;6.42e-09;2!UBERON:0003566;6.42e-09;2!UBERON:0000078;6.42e-09;2!UBERON:0003835;6.42e-09;2!UBERON:0001777;6.42e-09;2!UBERON:0001515;6.42e-09;2!UBERON:0002012;6.42e-09;2!UBERON:0008886;6.42e-09;2!UBERON:0010313;5.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.43e-09,2;UBERON:0005800,5.08e-09,2;UBERON:0001515,5.08e-09,2;UBERON:0001281,6.42e-09,2;UBERON:0003497,6.42e-09,2;UBERON:0003909,6.42e-09,2;UBERON:0003835,6.42e-09,2;UBERON:0000078,6.94e-09,2;UBERON:0007497,6.94e-09,2;UBERON:0003643,6.94e-09,2;UBERON:0003504,6.94e-09,2;UBERON:0003469,6.94e-09,2;UBERON:0003496,6.94e-09,2;UBERON:0002012,6.94e-09,2;UBERON:0008886,6.94e-09,2;UBERON:0007303,6.94e-09,2;UBERON:0002061,6.94e-09,2;UBERON:0005432,6.94e-09,2;UBERON:0004363,6.94e-09,2;UBERON:0003566,8.74e-09,2;UBERON:0001777,8.74e-09,2;UBERON:0001042,5.76e-07,10;UBERON:0009145,5.76e-07,10;UBERON:0010313,6.12e-07,10;UBERON:0002342,6.12e-07,10;UBERON:0005062,6.12e-07,10 | |||
|phase1_expression=0,1.07050261945492,0,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0,0,0.152826811495903,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0.46480320348181,0.284338464974843,0.293600439334847,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0.384273959177026,0.260118695119756,0.328875809207352,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0.402829317109147,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0.326923806226917,0,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.505754070234305,0,0.661763836394364,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,1.40241773803446,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.343135620597051,0,0,0,0,0,1.03993478527958,1.44331342025273,0,0,0.144366447761074,0.925971025153221,0,0,0,0.246217006087397,0,0,0,0,0,0.179117045405697,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,1.71072446022705,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0,0,0,0.845302752556,0.26593811658487,2.08014873822732,0.257207374262142,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0.200506470303285,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0.308097234229289,0,0.137836572484531,0,0.290033387828457,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0,0.324621940274555,0.561594356226918,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.687010689511529,0.307240764308458,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0.329607748453519,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0.622079175323615,0,0.179021174675609,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.568967241427498,0,0.236387681767936,0,0.583209226766509,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0.269272933229316,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0,0.802577647298789,0,0.729819156862664,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0.0870592065804026,0,0.343972064943233,0.677294319023596,0.584714536689484,0.246346371159628,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0.39961921916426,0.144090417154106,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0.399358000997982,0,0,0.134366944973453,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.4154403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| ||
|short_description=p@chr19:17417266..17417288,+ | |short_description=p@chr19:17417266..17417288,+ | ||
}} | }} |
Latest revision as of 04:51, 26 July 2015
Short description: | p@chr19:17417266..17417288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17417266..17417288, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.93e-16 | 1 |
thoracic aorta endothelial cell | 5.08e-09 | 2 |
endothelial cell of sinusoid | 6.42e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.42e-09 | 2 |
adipocyte of breast | 8.09e-09 | 2 |
keratocyte | 8.74e-09 | 2 |
migratory cranial neural crest cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.43e-09 | 2 |
segment of aorta | 5.08e-09 | 2 |
thoracic aorta | 5.08e-09 | 2 |
hepatic sinusoid | 6.42e-09 | 2 |
abdomen blood vessel | 6.42e-09 | 2 |
sinusoid | 6.42e-09 | 2 |
abdominal segment blood vessel | 6.42e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 6.94e-09 | 2 |
developing epithelial placode | 6.94e-09 | 2 |
respiratory system arterial blood vessel | 6.94e-09 | 2 |
respiratory system blood vessel | 6.94e-09 | 2 |
respiratory system artery | 6.94e-09 | 2 |
head blood vessel | 6.94e-09 | 2 |
pulmonary artery | 6.94e-09 | 2 |
pulmonary vascular system | 6.94e-09 | 2 |
pharyngeal vasculature | 6.94e-09 | 2 |
truncus arteriosus | 6.94e-09 | 2 |
aortic sac | 6.94e-09 | 2 |
pharyngeal arch artery | 6.94e-09 | 2 |
head connective tissue | 8.74e-09 | 2 |
substantia propria of cornea | 8.74e-09 | 2 |
chordate pharynx | 5.76e-07 | 10 |
pharyngeal region of foregut | 5.76e-07 | 10 |
neural crest-derived structure | 6.12e-07 | 10 |
neural crest | 6.12e-07 | 10 |
neural fold | 6.12e-07 | 10 |