FFCP PHASE1:Hg19::chr19:36048838..36048884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36048838..36048884,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr19:36048838..36048884,+ | |description=CAGE_peak_at_chr19:36048838..36048884,+ | ||
|id=chr19:36048838..36048884,+ | |id=chr19:36048838..36048884,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.12e-15!5 | |ontology_enrichment_celltype=CL:0002322!6.12e-15!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.77e-18;5!CL:0000322;1.26e-08;3!CL:0002321;8.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.77e-18,5;CL:0000322,1.04e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.00e-67;3 | |||
|ontology_enrichment_disease=DOID:5409!7.30e-07!4 | |ontology_enrichment_disease=DOID:5409!7.30e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.19e-08!86;UBERON:0007023!5.79e-07!115;UBERON:0000073!8.00e-07!94;UBERON:0001016!8.00e-07!94 | |ontology_enrichment_uberon=UBERON:0005743!5.19e-08!86;UBERON:0007023!5.79e-07!115;UBERON:0000073!8.00e-07!94;UBERON:0001016!8.00e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.37e-34;6!UBERON:0002680;5.99e-23;9!UBERON:0001895;5.99e-23;9!UBERON:0004733;2.08e-17;12!UBERON:0002028;2.08e-17;12!UBERON:0004732;3.99e-16;13!UBERON:0004903;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0002114;1.26e-08;2!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0009856;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.37e-34,6;UBERON:0006215,5.37e-34,6;UBERON:0002680,5.99e-23,9;UBERON:0001895,5.99e-23,9;UBERON:0010092,5.99e-23,9;UBERON:0004733,2.09e-17,12;UBERON:0002028,2.09e-17,12;UBERON:0007277,2.09e-17,12;UBERON:0004732,3.99e-16,13;UBERON:0003076,4.52e-14,15;UBERON:0003057,4.52e-14,15;UBERON:0004903,2.07e-12,2;UBERON:0002173,2.07e-12,2;UBERON:0002186,2.07e-12,2;UBERON:0004821,1.04e-08,3;UBERON:0003215,1.04e-08,3;UBERON:0010368,1.04e-08,3;UBERON:0009911,1.04e-08,3;UBERON:0002299,1.04e-08,3;UBERON:0006524,1.04e-08,3;UBERON:0008874,1.04e-08,3;UBERON:0002169,1.04e-08,3;UBERON:0004894,1.04e-08,3;UBERON:0002114,1.51e-08,2 | |||
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| ||
|short_description=p@chr19:36048838..36048884,+ | |short_description=p@chr19:36048838..36048884,+ | ||
}} | }} |
Latest revision as of 06:45, 26 July 2015
Short description: | p@chr19:36048838..36048884, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36048838..36048884, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.77e-18 | 5 |
pneumocyte | 1.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.37e-34 | 6 |
rhombic lip | 5.37e-34 | 6 |
regional part of metencephalon | 5.99e-23 | 9 |
metencephalon | 5.99e-23 | 9 |
future metencephalon | 5.99e-23 | 9 |
segmental subdivision of hindbrain | 2.09e-17 | 12 |
hindbrain | 2.09e-17 | 12 |
presumptive hindbrain | 2.09e-17 | 12 |
segmental subdivision of nervous system | 3.99e-16 | 13 |
posterior neural tube | 4.52e-14 | 15 |
chordal neural plate | 4.52e-14 | 15 |
bronchoalveolar duct junction | 2.07e-12 | 2 |
alveolar duct | 2.07e-12 | 2 |
bronchiole | 2.07e-12 | 2 |
pulmonary alveolus epithelium | 1.04e-08 | 3 |
alveolus | 1.04e-08 | 3 |
pulmonary lobule | 1.04e-08 | 3 |
lobule | 1.04e-08 | 3 |
alveolus of lung | 1.04e-08 | 3 |
alveolar system | 1.04e-08 | 3 |
pulmonary acinus | 1.04e-08 | 3 |
alveolar sac | 1.04e-08 | 3 |
alveolar wall | 1.04e-08 | 3 |
duodenum | 1.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.07e-12 | 2 |