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FFCP PHASE1:Hg19::chr19:36398154..36398173,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C143|description=CAGE_peak_at_chr19:36398154..36398173,-|id=chr19:36398154..36398173,-|ontology_enrichment_celltype=CL:0000766!2.83e-71!76;CL:0000763!8.93e-67!112;CL:0000049!8.93e-67!112;CL:0000557!3.98e-63!71;CL:0002009!4.63e-60!65;CL:0000839!8.05e-60!70;CL:0002194!5.44e-58!63;CL:0000576!5.44e-58!63;CL:0000040!5.44e-58!63;CL:0000559!5.44e-58!63;CL:0002057!5.23e-50!42;CL:0000738!1.03e-45!140;CL:0000860!1.76e-45!45;CL:0000037!9.30e-45!172;CL:0000566!9.30e-45!172;CL:0002032!4.48e-44!165;CL:0000837!4.48e-44!165;CL:0000988!1.92e-40!182;CL:0002031!1.96e-34!124;CL:0002087!4.36e-32!119;CL:0002393!2.50e-10!9;CL:0002397!2.50e-10!9;CL:0000990!6.56e-10!8;CL:0000094!1.14e-09!8;CL:0000451!1.13e-07!10;CL:0000134!1.69e-07!358;CL:0000840!3.78e-07!5;CL:0001029!3.78e-07!5;CL:0002320!6.60e-07!365|ontology_enrichment_celltype_v019=CL:0000860;6.72e-68;33!CL:0002057;6.72e-68;33!CL:0000473;6.99e-67;39!CL:0000234;6.99e-67;39!CL:0000576;3.37e-57;48!CL:0000766;6.11e-47;69!CL:0000763;4.35e-25;100!CL:0000738;4.87e-18;136!CL:0002087;3.44e-15;104!CL:0000235;8.35e-14;6!CL:0000990;1.19e-13;8!CL:0000094;4.03e-13;8!CL:0002393;7.20e-13;6!CL:0002397;7.20e-13;6!CL:0000451;6.44e-11;10!CL:0000988;2.27e-10;177!CL:0000453;3.30e-10;5!CL:0000081;3.16e-09;11!CL:0000840;1.28e-08;5!CL:0000775;4.41e-08;3!CL:0000219;2.26e-07;193!CL:0002619;7.53e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,8.46e-111,72;CL:0002009,1.96e-107,61;CL:0002194,1.36e-103,59;CL:0000576,1.36e-103,59;CL:0000040,1.36e-103,59;CL:0000559,1.36e-103,59;CL:0000473,4.95e-101,48;CL:0000234,4.95e-101,48;CL:0000557,6.49e-100,67;CL:0000839,1.98e-94,66;CL:0000763,7.64e-92,108;CL:0000049,7.64e-92,108;CL:0000860,7.57e-88,42;CL:0002057,7.57e-88,42;CL:0000738,1.50e-69,136;CL:0000037,4.12e-60,168;CL:0002032,2.10e-59,161;CL:0000837,2.10e-59,161;CL:0000988,4.15e-56,177;CL:0002087,3.74e-54,115;CL:0002031,6.84e-53,120;CL:0000134,1.05e-18,354;CL:0002320,5.56e-18,361;CL:0000219,1.91e-15,386;CL:0002393,1.56e-14,9;CL:0002397,1.56e-14,9;CL:0000235,6.02e-14,6;CL:0000990,1.02e-13,8;CL:0000094,4.19e-13,8;CL:0000048,2.30e-12,427;CL:0000723,6.08e-12,433;CL:0000034,2.13e-11,441;CL:0000451,5.69e-11,10;CL:0000453,3.14e-10,5;CL:0000081,3.25e-09,11;CL:0000840,1.04e-08,5;CL:0001029,1.04e-08,5;CL:0000775,4.31e-08,3;CL:0002619,6.15e-07,3|ontology_enrichment_development_v019=CL:0002057;1.02e-62;42!CL:0000049;9.09e-26;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.57e-64!102;UBERON:0003061!5.57e-64!102;UBERON:0002193!9.68e-59!112;UBERON:0002371!3.17e-53!80;UBERON:0001474!8.61e-48!86;UBERON:0002405!5.97e-39!115;UBERON:0004765!2.46e-38!101;UBERON:0001434!2.46e-38!101;UBERON:0007023!2.38e-21!115;UBERON:0003081!6.56e-21!216;UBERON:0002204!6.36e-17!167;UBERON:0000178!2.01e-09!15;UBERON:0000179!2.01e-09!15;UBERON:0000463!2.01e-09!15;UBERON:0002420!2.32e-07!9;UBERON:0007245!2.32e-07!9;UBERON:0010009!2.32e-07!9;UBERON:0010011!2.32e-07!9;UBERON:0000454!2.32e-07!9;UBERON:0000479!3.00e-07!787|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-10;15!UBERON:0000179;2.63e-10;15!UBERON:0000463;2.63e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.61e-88,98;UBERON:0003061,4.61e-88,98;UBERON:0002371,2.60e-86,76;UBERON:0002193,4.98e-81,108;UBERON:0001474,6.96e-79,82;UBERON:0004765,1.66e-70,90;UBERON:0002405,2.10e-70,93;UBERON:0001434,6.59e-62,100;UBERON:0003081,3.76e-36,203;UBERON:0002204,8.36e-31,167;UBERON:0000926,4.36e-17,315;UBERON:0004120,4.36e-17,315;UBERON:0006603,4.36e-17,315;UBERON:0002384,5.35e-17,371;UBERON:0000178,2.87e-10,15;UBERON:0000179,2.87e-10,15;UBERON:0000463,2.87e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,2.32224184974114,0,0,0,0,0,0,1.10799081706375,8.02177789880567,4.12320654360118,1.34349284543955,2.26725566213286,2.83333124397605,23.4091164435099,22.6725566213286,22.8029017516547,19.7564681369832,15.2132118568076,10.8397229813286,19.8507750702284,16.9066066309206,11.5876292645407,8.61864201841546,8.39130088658974,5.41705946377367,27.2951392336777,26.1989904055532,7.19115150224271,24.1806274973013,10.5906578935111,14.7047538933779,13.5239033076554,22.1404659960011,20.4587880255693,22.0559021357724,19.2910976394988,16.1933784738849,21.3561365468232,16.6874533894464,15.8547856634735,15.1349875658342,9.94349617166425,8.54448446090388,8.66146673878961,8.2915676986367,1.25795187305026,4.83013113929929,5.55654503513573,11.8936934155839,0.570025487482497,6.96208370196815,2.55729815270488,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,1.29818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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr19:36398154..36398173,-
|coexpression_cluster_id=C143
|description=CAGE_peak_at_chr19:36398154..36398173,-
|id=chr19:36398154..36398173,-
|ontology_enrichment_celltype=CL:0000766!2.83e-71!76;CL:0000763!8.93e-67!112;CL:0000049!8.93e-67!112;CL:0000557!3.98e-63!71;CL:0002009!4.63e-60!65;CL:0000839!8.05e-60!70;CL:0002194!5.44e-58!63;CL:0000576!5.44e-58!63;CL:0000040!5.44e-58!63;CL:0000559!5.44e-58!63;CL:0002057!5.23e-50!42;CL:0000738!1.03e-45!140;CL:0000860!1.76e-45!45;CL:0000037!9.30e-45!172;CL:0000566!9.30e-45!172;CL:0002032!4.48e-44!165;CL:0000837!4.48e-44!165;CL:0000988!1.92e-40!182;CL:0002031!1.96e-34!124;CL:0002087!4.36e-32!119;CL:0002393!2.50e-10!9;CL:0002397!2.50e-10!9;CL:0000990!6.56e-10!8;CL:0000094!1.14e-09!8;CL:0000451!1.13e-07!10;CL:0000134!1.69e-07!358;CL:0000840!3.78e-07!5;CL:0001029!3.78e-07!5;CL:0002320!6.60e-07!365
|ontology_enrichment_celltype_v019=CL:0000860;6.72e-68;33!CL:0002057;6.72e-68;33!CL:0000473;6.99e-67;39!CL:0000234;6.99e-67;39!CL:0000576;3.37e-57;48!CL:0000766;6.11e-47;69!CL:0000763;4.35e-25;100!CL:0000738;4.87e-18;136!CL:0002087;3.44e-15;104!CL:0000235;8.35e-14;6!CL:0000990;1.19e-13;8!CL:0000094;4.03e-13;8!CL:0002393;7.20e-13;6!CL:0002397;7.20e-13;6!CL:0000451;6.44e-11;10!CL:0000988;2.27e-10;177!CL:0000453;3.30e-10;5!CL:0000081;3.16e-09;11!CL:0000840;1.28e-08;5!CL:0000775;4.41e-08;3!CL:0000219;2.26e-07;193!CL:0002619;7.53e-07;3
|ontology_enrichment_celltype_v019_2=CL:0000766,8.46e-111,72;CL:0002009,1.96e-107,61;CL:0002194,1.36e-103,59;CL:0000576,1.36e-103,59;CL:0000040,1.36e-103,59;CL:0000559,1.36e-103,59;CL:0000473,4.95e-101,48;CL:0000234,4.95e-101,48;CL:0000557,6.49e-100,67;CL:0000839,1.98e-94,66;CL:0000763,7.64e-92,108;CL:0000049,7.64e-92,108;CL:0000860,7.57e-88,42;CL:0002057,7.57e-88,42;CL:0000738,1.50e-69,136;CL:0000037,4.12e-60,168;CL:0002032,2.10e-59,161;CL:0000837,2.10e-59,161;CL:0000988,4.15e-56,177;CL:0002087,3.74e-54,115;CL:0002031,6.84e-53,120;CL:0000134,1.05e-18,354;CL:0002320,5.56e-18,361;CL:0000219,1.91e-15,386;CL:0002393,1.56e-14,9;CL:0002397,1.56e-14,9;CL:0000235,6.02e-14,6;CL:0000990,1.02e-13,8;CL:0000094,4.19e-13,8;CL:0000048,2.30e-12,427;CL:0000723,6.08e-12,433;CL:0000034,2.13e-11,441;CL:0000451,5.69e-11,10;CL:0000453,3.14e-10,5;CL:0000081,3.25e-09,11;CL:0000840,1.04e-08,5;CL:0001029,1.04e-08,5;CL:0000775,4.31e-08,3;CL:0002619,6.15e-07,3
|ontology_enrichment_development_v019=CL:0002057;1.02e-62;42!CL:0000049;9.09e-26;108
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!5.57e-64!102;UBERON:0003061!5.57e-64!102;UBERON:0002193!9.68e-59!112;UBERON:0002371!3.17e-53!80;UBERON:0001474!8.61e-48!86;UBERON:0002405!5.97e-39!115;UBERON:0004765!2.46e-38!101;UBERON:0001434!2.46e-38!101;UBERON:0007023!2.38e-21!115;UBERON:0003081!6.56e-21!216;UBERON:0002204!6.36e-17!167;UBERON:0000178!2.01e-09!15;UBERON:0000179!2.01e-09!15;UBERON:0000463!2.01e-09!15;UBERON:0002420!2.32e-07!9;UBERON:0007245!2.32e-07!9;UBERON:0010009!2.32e-07!9;UBERON:0010011!2.32e-07!9;UBERON:0000454!2.32e-07!9;UBERON:0000479!3.00e-07!787
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|short_description=p@chr19:36398154..36398173,-
}}

Latest revision as of 06:56, 26 July 2015

Short description:p@chr19:36398154..36398173, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr19:36398154..36398173, -
Coexpression cluster:C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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